Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Onsongo (2016)
Title Prevalence of transmitted drug resistance mutations in HIV-1-infected drug-naive patients from urban and suburban regions of Kenya.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 63
NumPts 63
Subtype A, B, CRF01_AE, C, D, CRF35_AD, CRF05_DF, CRF45_cpx, G

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
1 1 None    R41K, R57K, L63V, I64V, E65D, K70R, V77I  
106 106 None   K43T E35D, M36I, N37K, R41K, R57K, L63N, H69K, I72V, L89M  
107 107 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
108 108 None    E35D, M36I, R41K, K45R, R57K, L63P, H69K  
110 110 None    R41K, I64V, V77I  
114 114 None    D25H, E35D, M36I, N37D, R57K, L63P, H69K, V77I, V82I, L89M  
115 115 None    R41K, L63P, I64V, E65D, H69Y  
116 116 None    E35D, M36I, N37D, R57K, L63T, E65D, H69K, L89M  
118 118 None    M36I, N37K, R41N, L63T, H69K, I72V, V82I, I93L  
121 121 None    E35D, M36I, N37D, R41K, R57K, H69K, K70R, I72V, L89M  
124 124 None    E35D, M36I, R41K, K45R, R57K, L63S, H69K, V77I, L89M  
126 126 None    M36I, R41K, L63P, H69K, L89M, I93L T31N 
128 128 None    N37E, R41K, I62V, I64V, V77I  
130 130 None    E35D, M36I, R41K, H69K, L89M  
131 131 None    E35D, M36I, R41K, H69K, L89M  
16 16 None    L33I, M36I, R41K, L63A, H69K, L89M  
17 17 None    E35D, M36I, R41K, R57K, I62V, L63V, H69K, T74S, V77I, L89M  
18 18 None    L33V, R41K, L63S, I64V  
2 2 None    E35D, M36I, R41K, H69K, L89M  
21 21 None    L33I, E35D, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, L89M  
22 22 None    E35D, M36I, N37D, R41K, R57K, H69K, K70R, I72V, L89M  
24 24 None    E35D, M36I, N37D, R41K, K45R, R57K, H69R, L89M  
25 25 None    M36I, R41K, L63T, I64V, I72T  
29 29 None    L33I, M36I, R41K, L63A, H69K, L89M  
3 3 None    M36T, N37K, R41N, I62V, L63P, H69K, I93L  
31 31 None    L33I, M36I, R41K, L63A, H69K, L89M  
32 32 None    D29N, L33I, M36I, R41K, L63A, H69K, L89M  
34 34 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
37 37 None    N37E, I64V, V77I  
39 39 None    R41K, K45R, R57K, L63A, I64V, A71T, I72V, V77I, I93L  
41 41 None    L33I, M36I, R41K, L63V, H69K, L89M  
43 43 None    M36I, N37K, R41N, H69K, L89M, I93L  
46 46 None    E35D, M36I, R41K, L63T, H69S, K70R, N83S, L89M  
51 51 None    R41K, L63S  
54 54 None    L33I, M36I, R41K, L63A, H69K, L89I  
55 55 None    L33I, M36I, R41K, L63A, H69K, L89M  
56 56 None    L33I, M36I, R41K, L63A, H69K, L89I  
57 57 None    L33I, M36I, R41K, L63A, H69K, L89M  
58 58 None    L33I, M36I, P39T, R41K, R57K, L63A, H69K, L89M  
60 60 None    E35D, M36I, R41K, R57K, I62V, L63V, E65D, H69K, L89M  
62 62 None    M36I, R41K, I62V, L63Q, I72T, V82I, L89M  
64 64 None    L33V, M36I, R41K, K45R, R57K, L63P, G68E, H69K, K70R, L89I  
65 65 None    L33I, M36I, R41K, L63A, I64L, H69K, L89M  
66 66 None    M36I, R41K, I62V, L63Q, I72T, V82I, L89M  
67 67 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
69 69 None    E35D, M36I, R41K, R57K, L63P, H69K, L89M  
72 72 None    E35D, M36I, R41K, K45R, R57K, H69K, L89M  
74 74 None    E34Q, M36I, R41K, H69K, L89M, I93L  
76 76 None    M36I, R41K, L63S, H69K, L89M, I93L  
77 77 None    D25N, E35D, M36I, R41K, R57K, L63T, I64L, H69R, L89M  
79 79 None    E35D, M36I, R41K, L63T, C67G, G68E, H69K, K70R, I72T, L89M, T91V  
81 81 None    E35D, M36I, N37E, R41K, K43R, R57K, L63T, H69K, K70R, I72T, L89M  
84 84 None    E35D, M36I, N37D, R57K, L63P, H69K, L89M  
85 85 None    E35D, M36I, R41K, K43R, R57K, L63T, H69K, L89M, I93V  
87 87 None    L33I, E35D, M36I, P39Q, R41K, L63T, H69K, L89M  
88 88 None    L33I, M36I, R41K, L63A, H69K, L89M  
89 89 None    L33I, M36I, R41K, L63A, H69K, L89M  
90 90 None    R41K, L63A, H69K, L89M  
91 91 None    N37E, R41K, I64V, V77I  
92 92 None    E35D, M36I, N37D, R41K, K45R, R57K, I62V, L63V, C67Y, H69K, L89M  
94 94 None    E35D, M36I, R41K, K45R, R57K, L63P, H69K  
96 96 None    R41K, I64V, I72L  
98 98 None    M36I, R41K, L63Q, I64V, I72V  

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