Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Msimanga (2015)
Title HIV-1 diversity in an antiretroviral treatment naive cohort from Bushbuckridge, Mpumalanga province, South Africa.
Citation Virol J
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 12
NumPts 12
Subtype C


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
0005A 0005A None None   V8I, V35T, E36A, T39E, S48T, K122E, D123G, I142V, K173A, D177E, T200A, Q207D, R211K, V245Q, E248T  
0040A 0040A None None   V35T, E36A, T39E, K43R, S48T, K122E, D123S, A158S, K166R, K173V, Q174K, D177E, G196K, T200A, Q207D, R211K, I244V, V245Q, E248N, D250E  
0042A 0042A None None   V35T, E36A, T39E, S48T, V60I, K122E, D123S, K173T, Q174K, D177E, I178L, T200A, Q207A, R211K, V245Q  
0064A 0064A None None   V35T, E36A, T39E, S48T, K122E, K173A, D177E, I178M, T200A, Q207N, R211K, V245Q  
0085A 0085A None None   K20R, T27S, V35T, E36A, T39E, S48T, K122E, D123N, I135T, S162Y, K173T, D177E, T200A, Q207E, R211K, P243T, V245Q, E248D  
0130A 0130A None None   K32Q, V35T, E36A, T39D, S48T, K82R, A98S, K122E, D123N, K173A, D177E, I178V, T200A, Q207A, V245Q  
0132A 0132A None None   V35T, T39E, S48T, V60I, K101Q, K122E, D123N, I135R, K173A, Q174K, D177G, V179I, T200A, Q207T, R211K, V245Q, E248D, D250E  
0136A 0136A None None   V35R, E36A, T39D, S48T, V60I, K122E, S162C, K173T, Q174K, D177E, I178L, G196E, T200A, Q207E, R211K, V245E  
0143A 0143A None None  K103KN, E138A K20R, V35T, E36A, T39E, S48T, K122E, D123G, K173A, Q174K, D177E, G196M, Q207A, R211K, V245Q, D250E  
0173A 0173A None None   V35T, T39E, S48E, V60I, D123S, I135V, K173I, Q174K, Q197H, T200A, Q207A, R211K, I244V, V245Q, D250E  
0189A 0189A None None  K101E E6K, V8I, V35T, E36A, T39E, S48T  
0206A 0206A None None   V8I, V35T, T39E, S48T, K122E, D123N, K173T, Q174K, D177N, T200A, Q207E, R211K, V245Q