Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Skhosana (2015)
Title High Prevalence of the K65R Mutation in HIV-1 Subtype C Infected Patients Failing Tenofovir-Based First-Line Regimens in South Africa.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 160
NumPts 160
Subtype C, CRF01_AE

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 160 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
10ZALS002 10ZALS002 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
10ZALS003 10ZALS003 None    I15V, L19T, K20R, M36I, R41K, Q61E, H69K, T74S, V77I, L89M, I93L  
10ZALS005 10ZALS005 None    T12S, I15V, G16E, L19I, K20M, M36I, R41K, K45R, D60E, I62V, L63H, H69K, I93L  
11ZALS008 11ZALS008 None    T12S, K14R, I15V, L19I, K20R, E35D, M36I, N37D, R41K, D60E, H69K, T74S, L89M, I93L  
11ZALS010 11ZALS010 None    T12S, K14R, I15V, L19V, M36I, R41K, L63P, H69K, L89I, I93L  
11ZALS013 11ZALS013 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, R57RK, Q61E, L63X, H69K, V82VI, L89M, I93L  
11ZALS015 11ZALS015 None  I47ILV  K14R, I15V, L19I, N37Q, R41K, L63C, H69K, V77L, L89M, I93L M36T_DV 
11ZALS017 11ZALS017 None    T12S, L19V, K20M, E35DN, M36I, R41K, L63P, H69K, T74S, L89M, I93L  
11ZALS018 11ZALS018 None    T12S, I15V, L19I, M36I, R41RK, L63P, H69K, K70KR, I72V, I93L  
11ZALS019 11ZALS019 None   K20T T12S, I15V, G16E, Q18H, L19I, M36I, R41K, D60E, L63Q, H69K, A71T, L89I, I93L  
11ZALS021 11ZALS021 None    T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L  
11ZALS023 11ZALS023 None    I15V, L19I, E35D, M36I, R41K, K45R, L63P, H69K, L89M, I93L  
11ZALS024 11ZALS024 None    I15V, L19I, E35D, N37NS, R41K, H69K, V77I, L89M, I93L  
11ZALS027 11ZALS027 None    T12A, I15IV, G16GE, L19T, K20R, E35D, M36I, R41K, L63S, H69K, K70R, I72V, L89M, I93L  
11ZALS028 11ZALS028 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
11ZALS029 11ZALS029 None    T12S, I15V, L19V, M36I, R41K, D60E, L63LP, H69K, L89M, I93L  
11ZALS030 11ZALS030 None    I15V, L19LI, M36I, R41K, D60E, Q61E, H69K, L89M, I93L  
11ZALS031 11ZALS031 None    T12S, I15V, Q18H, L19I, K20R, M36I, R41K, I62V, L63P, H69K, I93L  
11ZALS033 11ZALS033 None    I15V, L19V, M36I, R41K, K45R, R57K, L63P, C67Y, H69K, I93L  
11ZALS034 11ZALS034 None    T12S, I15V, L19E, K20R, M36I, R41K, R57K, L63T, H69K, A71T, I72V, V77I, I93L  
11ZALS036 11ZALS036 None    L10M, T12S, I15V, M36I, R41K, Q61E, H69K, L89M, I93L  
11ZALS037 11ZALS037 None    T12S, K14R, I15V, L19I, M36I, R41K, H69K, K70R, L89M, I93L  
11ZALS038 11ZALS038 None    I15V, L19T, L63P, H69K, I72L, V77I, I93L  
11ZALS039 11ZALS039 None    T12S, L19I, M36I, R41K, Q61E, L63P, H69K, L89M, I93L  
11ZALS042 11ZALS042 None    I15V, L19V, K20KR, M36I, R41K, L63LPS, H69K, L89M, I93L  
11ZALS043 11ZALS043 None    T12S, I15V, G16E, L19I, M36I, D60E, I62V, H69K, L89M, I93L  
11ZALS044 11ZALS044 None    T12S, I15V, L19I, E35D, M36I, R41K, K45R, H69K, T74S, L89M, I93L  
11ZALS046 11ZALS046 None    T12S, I15V, L19IT, M36I, R41K, L63P, H69K, L89M, I93L  
11ZALS047 11ZALS047 None    K14N, I15V, L19I, E35D, M36I, N37T, L63V, H69K, L89M, I93L  
11ZALS048 11ZALS048 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74A, L89M  
11ZALS050 11ZALS050 None    L19V, M36I, Q61X, L63PS, H69K, K70R, L89M, I93L  
11ZALS051 11ZALS051 None    T12TS, I15V, L19T, K20R, E35ED, M36I, N37NS, P39PS, R41K, K45KR, I62V, L63A, H69K, V82I, L89M, I93L  
11ZALS052 11ZALS052 None    T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
11ZALS053 11ZALS053 None    L10M, T12TS, K14KR, I15V, L19IV, E35D, M36I, N37D, R41K, D60E, Q61E, L63V, H69K, L89M, I93L  
11ZALS054 11ZALS054 None    T12S, L19V, K20R, M36I, R41K, D60E, L63A, H69K, L89M, I93L  
11ZALS055 11ZALS055 None    I15V, L19I, M36I, R41K, Q61E, H69K, L89M, I93L  
11ZALS056 11ZALS056 None    T12S, I15V, G16E, L19I, M36I, R41K, L63ST, I64L, H69K, L89M, I93L  
11ZALS058 11ZALS058 None    T12S, L19I, E35D, M36I, R41K, K45R, D60E, I62V, L63P, I64M, C67S, H69K, L89M, I93L  
11ZALS062 11ZALS062 None    T12S, I15V, G16A, L19I, M36I, R41K, Q61E, H69K, I93L  
11ZALS063 11ZALS063 None    T12S, I15V, L19IMV, M36I, R41K, D60E, Q61E, L63P, H69K, V82I, L89M, I93L M46K 
11ZALS067 11ZALS067 None    I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
11ZALS069 11ZALS069 None    T12S, I15V, L19IV, K20R, M36I, N37D, R41K, L63IN, H69K, L89M, I93L  
11ZALS070 11ZALS070 None    T12S, I15V, L19I, E35D, M36I, R41K, R57K, L63V, H69K, T74S, L89M, I93L  
11ZALS071 11ZALS071 None    T12S, I15V, G16E, L19I, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
11ZALS073 11ZALS073 None    T12S, I15V, L19V, M36I, R41K, L63P, H69K, L89M, I93L  
11ZALS074 11ZALS074 None    T12S, I15V, L19I, E35D, M36I, R41K, K45R, H69K, V82I, L89M, I93L  
11ZALS075 11ZALS075 None    T12S, I15V, L19IV, M36I, R41K, Q61E, L63P, H69K, L89M, I93L  
11ZALS076 11ZALS076 None    T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
11ZALS077 11ZALS077 None    I15V, L19I, M36I, R41K, H69K, L89M, I93L  
11ZALS081 11ZALS081 None    T12S, I15V, L19I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, V82I, L89M, I93L  
11ZALS083 11ZALS083 None    T12S, I15V, L19I, M36I, N37S, R41K, L63A, H69K, T74S, L89M, I93L  
11ZALS084 11ZALS084 None    T12S, I15V, L19I, M36I, R41K, D60E, Q61E, H69K, L89M, I93L  
11ZALS087 11ZALS087 None    T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
11ZALS088 11ZALS088 None    I15V, L19I, M36I, R41K, L63T, H69K, I93L  
11ZALS093 11ZALS093 None    T12S, I15V, L19V, E35D, M36I, R41K, Q61E, L63P, H69K, V82I, L89M, I93L  
11ZALS094 11ZALS094 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
12ZALS095 12ZALS095 None    T12S, I15V, L19I, R41K, L63P, H69K, V77I, I93L  
12ZALS097 12ZALS097 None    T12S, I15V, L19I, K20R, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L  
12ZALS098 12ZALS098 None    T12S, I15V, L19T, L63P, H69K, V77I, L89M, I93L  
12ZALS099 12ZALS099 None    T12S, I15V, L19V, E35D, M36I, R41K, R57K, D60E, Q61E, H69K, L89M, I93L  
12ZALS100 12ZALS100 None    I15V, L19V, E35D, M36I, N37D, R41K, L63T, H69K, T74S, I93L  
12ZALS101 12ZALS101 None    T12S, L19T, K20R, E35D, M36I, N37E, Q61E, L63P, H69K, L89M, I93L  
12ZALS102 12ZALS102 None    T12S, I15V, L19V, M36I, R41K, K45R, Q61E, L63P, H69K, I93L  
12ZALS103 12ZALS103 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, I64V, H69K, I93L  
12ZALS104 12ZALS104 None    M36K, R41K, L63P, H69K, I93L  
12ZALS106 12ZALS106 None    W6R, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
12ZALS109 12ZALS109 None    T12S, I15V, L19I, T31TA, E35D, M36I, R41K, K45R, Q61E, L63P, H69K, T74S, L89M, I93L  
12ZALS110 12ZALS110 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
12ZALS112 12ZALS112 None    T12S, I15V, L19I, M36I, N37D, R41K, D60N, Q61E, L63EV, H69K, T74AS, L89M, I93L  
12ZALS114 12ZALS114 None    T12S, I13V, I15V, L19I, K20R, M36I, R41K, D60E, H69K, L89M, I93L  
12ZALS115 12ZALS115 None    L19V, K20R, M36I, R41K, L63T, H69K, I93L  
12ZALS116 12ZALS116 None    T12S, I15V, L19I, M36I, R41K, D60E, Q61QE, L63P, H69K, L89M, I93L  
12ZALS118 12ZALS118 None    T12P, L19I, E35D, N37S, R41K, I62V, L63V, C67Y, H69K, A71T, V82I, L89I, I93L  
12ZALS119 12ZALS119 None    I15V, L19V, E35D, M36I, N37D, L63P, H69K, L89M, I93L  
12ZALS121 12ZALS121 None    T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
12ZALS122 12ZALS122 None    T12S, I15V, L19V, M36I, R41K, L63P, I64L, H69K, L89M, I93L  
12ZALS123 12ZALS123 None    T12S, I15V, L19T, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
12ZALS125 12ZALS125 None    W6R, T12S, I15V, L19V, M36I, R41K, L63V, I64L, H69K, V82I, I93L  
12ZALS126 12ZALS126 None   N83ND T12S, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
12ZALS127 12ZALS127 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, L63A, H69K, T74S, L89M, I93L  
12ZALS129 12ZALS129 None    T12S, I15V, L19V, E35D, M36I, R41K, H69K, L89M, I93L  
12ZALS130 12ZALS130 None    I13V, M36I, R41K, L63A, H69K, V75I, L89M  
12ZALS132 12ZALS132 None    T12P, I15V, L19I, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
12ZALS136 12ZALS136 None    I15V, L19I, M36I, N37D, R41K, H69K, L89M, I93L  
12ZALS137 12ZALS137 None    T12S, I15V, L19I, K20R, M36I, R41K, K43R, L63T, H69K, L89I, I93L  
12ZALS139 12ZALS139 None    T12S, I15V, L19I, E35D, R41K, L63P, H69K, A71V, P79S, I93L  
12ZALS140 12ZALS140 None    T12S, I15V, L19I, M36I, R41K, I62V, L63P, H69K, T74A, L89M, I93L  
12ZALS141 12ZALS141 None    T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
12ZALS142 12ZALS142 None    T12S, I15V, Q18E, L19I, K20R, E35D, M36I, R41K, Q61E, L63C, H69K, I93L  
12ZALS143 12ZALS143 None    T12S, I15V, L19T, K20R, M36I, N37S, R41K, L63P, C67H, H69K, V77I, L89M, I93IL  
12ZALS144 12ZALS144 None    T12S, I15V, L19I, E35D, M36I, R41K, L63AV, H69K, T74S, L89M, I93L  
12ZALS145 12ZALS145 None    T12S, I15V, L19T, K20R, E35D, M36I, N37D, R57K, L63P, H69K, L89M, I93L  
12ZALS150 12ZALS150 None    T12S, I15V, L19I, K20R, M36I, R41K, L63T, H69K, V77I, L89M, I93L  
12ZALS152 12ZALS152 None    T12S, I15V, L19I, K20R, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
12ZALS153 12ZALS153 None    T12S, I15V, L19I, K20R, M36I, R41K, L63P, H69K, K70KR, V77I, L89M, I93L  
12ZALS154 12ZALS154 None    I15V, L19I, E35D, M36I, R41K, R57K, H69K, T74S, L89M, I93L  
12ZALS155 12ZALS155 None    L10V, K14R, I15V, L19I, M36I, P39Q, R41K, L63T, H69K, L89F  
12ZALS156 12ZALS156 None    I15V, L19I, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
12ZALS157 12ZALS157 None    T12S, I15V, L19I, K20R, M36I, R41K, L63P, H69K, V77I, I93L  
12ZALS158 12ZALS158 None    I15V, G17E, L19I, K20R, E35D, M36I, R41K, D60E, L63T, H69K, L89IM, I93L  

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