Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Shcherbakova (2014)
Title Molecular epidemiology, phylogeny, and phylodynamics of CRF63_02A1, a recently originated HIV-1 circulating recombinant form spreading in Siberia.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 22
NumPts 22
Subtype CRF02_AG, A, CRF63_02A1

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
RU_5335 RU_5335 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, H69K, L89M  
RU_5356 RU_5356 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
RU_5365 RU_5365 Unknown    I13V, K14R, G16E, L19I, K20I, E35D, M36I, N37D, R41K, I64M, C67H, H69K, L89M  
RU_6391 RU_6391 Unknown    I13V, K14R, G16E, L19P, K20I, E35D, M36I, N37D, R41K, L63I, I64M, H69K, L89M  
RU_8112 RU_8112 Unknown    L10I, I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, C67Y, H69K, L89M, I93V, F99L  
RU_8141 RU_8141 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, C67H, H69K, L89M  
RU_8142 RU_8142 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37ND, R41K, I64M, C67H, H69K, L89M  
RU_8148 RU_8148 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, C67G, H69K, L89M  
RU_8168 RU_8168 Unknown    L10V, I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, C67Y, H69K, L89M  
RU_8169 RU_8169 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, K43R, L63H, I64M, H69K, L89M  
RU_8498 RU_8498 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, R57RK, I64M, H69K, K70KR, L89M  
RU_8499 RU_8499 Unknown   K43T T12A, I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
RU_8501 RU_8501 Unknown    I13V, I15IL, G16E, K20I, E35D, M36I, N37D, R41K, I64M, H69K, K70R, L89M  
RU_8506 RU_8506 Unknown    I13V, G16E, E35D, M36I, R41K, H69K, V77I, L89M, I93L  
RU_8507 RU_8507 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37D, R41K, I64M, H69K, L89M  
RU_8508 RU_8508 Unknown    L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M  
RU_8510 RU_8510 Unknown    I13V, K14KR, G16E, K20I, E35D, M36I, N37D, R41K, I62IM, I64M, H69K, L89M  
RU_8511 RU_8511 Unknown    K14KR, I15IV, E35D, M36I, R41K, L63P, H69K, V77VI, L89M, I93L  
RU_8513 RU_8513 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, C67Y, H69K, L89M  
RU_8515 RU_8515 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
RU_8516 RU_8516 Unknown    L10I, G16E, E35D, M36I, R41K, L63I, H69Q, I72V, L89M, T91TI, I93FL  
RU_9096 RU_9096 Unknown    I13V, K14R, G16E, K20I, E35D, M36I, N37ND, R41K, I64M, C67Y, H69K, L89M  

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