Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Han (2013)
Title High prevalence of HIV-1 intersubtype BC recombinants among injecting drug users in Dehong, China.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 95
NumPts 95
Subtype C, B, B + C, CRF01_AE, CRF64_BC

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
DHDR19I DHDR19I None    T12S, K14R, I15V, L19I, M36V, R41K, I62V, L63P, I93L  
LC002I LC002I None    R8Q, T12S, I15V, L19I, D29N, M36V, R41K, W42*, L63P, A71V, I93L  
LC004I LC004I None    E35D, L63P, I93L D25DV 
LC005I LC005I None    L63P  
LC007I LC007I None    T12S, I15V, L19I, M36V, R41K, L63P, H69K, K70R  
LC008I LC008I None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
LC013I LC013I None    M36L, N37S, R41K, L63P, H69K  
LC015I LC015I None    T12P, K14R, I15V, L19T, M36I, R41K, L63P, H69K, I93L  
LC016I LC016I None    T12S, K14R, I15V, L19I, M36I, R41K, L63T, H69K, I93L  
LC017I LC017I None    T12S, K14R, I15V, L19I, M36I, R41K, L63H, H69K, L89M, I93L  
LC018I LC018I None    T12S, K14R, I15V, L19V, M36I, R41K, L63S, H69K, I93L  
LC019I LC019I None    L19S, L33I, E35D, L63P, A71T  
LC021I LC021I None    T12S, I13V, K14R, I15V, L19I, M36V, R41K, K43R, L63P, H69K, K70R, I93L  
LC022I LC022I None    T12P, K14R, L63P, I93L  
LC026I LC026I None    T12P, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, I93L  
LC027I LC027I None    T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, I93L  
LC028I LC028I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
LC030I LC030I None    T12S, K14R, I15V, L19I, M36I, R41K, L63H, H69K, I93L  
LC031I LC031I None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, I93L  
LC032I LC032I None    T12S, K14R, I15V, L19I, M36I, R41K, L63S, H69K, I93L  
LC038I LC038I None    T12S, I13V, K14R, I15V, L19I, M36I, R41K, L63A, H69K  
LC040I LC040I None    T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, K70R, I93L  
LC045I LC045I None    T12S, K14R, I15V, L19I, M36I, R41K, L63H, H69K, I93L  
LC049I LC049I None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
LC051I LC051I None    L19V, L63P, I64M, V77I, I93L  
LC052I LC052I None    T12S, K14R, I15V, L19I, K20R, M36I, R41K, L63H, H69K, I93L  
LC053I LC053I None    T12P, K14R, I15V, L19I, M36V, R41K, K43R, L63P, H69K, K70R, A71T, I93L  
LC054I LC054I None    T12S, K14R, I15V, L19I, M36I, R41K, L63S, H69K, I93L  
LC055I LC055I None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
LC216002I LC216002I None    T12AS, I15V, G16GE, L19I, M36I, L63AT, H69K, I93L  
LC216003I LC216003I None    I15V, L19I, M36I, R41K, L63T, I64IV, I72T  
LC216004I LC216004I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
LC216005I LC216005I None   L89V T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, A71T, I93L  
LC216017I LC216017I None    T12S, K14R, I15V, L19I, M36V, R41K, L63P, I64M, H69K, L89M, I93L  
LC216018I LC216018I None    T12TP, K14R, I15V, L19I, K20KR, M36I, R41K, L63H, H69K, I93IL  
LC216027I LC216027I None    T12S, K14KR, I15IV, L19I, M36I, R41K, L63P, H69K, K70R  
LC216029I LC216029I None    T12A, E35D, L63P, I93LV  
LC216031I LC216031I None    T12P, K14R, I15V, L19LI, M36I, R41K, L63P, I72V, I93L  
LC216036I LC216036I None    E35D, I62V, L63P, I93L  
LC216038I LC216038I None    E35D, D60E, L63P, I93L  
LC216043I LC216043I None    T12P, K14R, E35ED, L63P, I93L  
LC216053I LC216053I None    T12S, K14R, I15V, G16E, L19V, M36I, R41K, L63S, H69K, I93L  
LC216055I LC216055I None    L10IV, I13V, E35D, M36I, R41K, H69K, L89M, I93V  
LCDR186I LCDR186I None    I13V, L19M, M36V, R41K, L63P, I93L  
LCDR187I LCDR187I None    T12A, E35D, L63P, I93L  
LCDR235I LCDR235I None    T12S, K14R, I15V, L19I, M36I, R41K, D60E, L63P, H69K, I93L  
LCGA10I LCGA10I None    Q18H, E35D, L63P, A71T, I93L  
LCGA492I LCGA492I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
LCGA494I LCGA494I None    Q18H, E35D, L63P, A71T, I93L  
LCGA496I LCGA496I None    T12S, K14R, I15V, L19I, M36I, N37D, R41K, D60E, L63V, H69K  
LCGA497I LCGA497I None    L19I, M36V, R41K, R57K, L63P, I93L  
LCGA499I LCGA499I None    T12S, K14R, I15V, L19I, M36I, R41K, D60E, L63T, H69K, L89M, I93L  
LCGA919I LCGA919I None    T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L  
LX047IA LX047IA None    T12S, K14R, L19T, N37S, L63P, I93L  
LX090IA LX090IA None    T12S, K14R, I15V, L19M, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
LX133IA LX133IA None    T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89I, I93L  
LX219003I LX219003I None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, K45R, L63P, C67Y, H69K, L89M, I93L  
LX219006I LX219006I None    T12A, I15V, L19T, M36I, R41K, L63A, H69K, T74TA, L89M, I93L  
LX219028I LX219028I None    T12S, K14R, I15V, L19T, M36I, R41K, L63P, H69K, L89LM, I93L  
LX219037I LX219037I None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, I93L  
LX219050I LX219050I None    L63P, I72IV, V77I, I93L  
LX219051I LX219051I None    T12S, K14KR, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
LX219053I LX219053I None    E35D, L63P, I72V, V75VI, I93L  
LXGA19I LXGA19I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, I93L  
RL106I RL106I None    T12S, K14R, I15V, L19I, M36I, R41K, K45R, L63P, H69K, I93L  
RL115I RL115I None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
RL215005I RL215005I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
RL215009I RL215009I None    T12S, K14R, I15V, L19I, M36MI, R41RK, L63P, H69X, L89M, I93L  
RL215012I RL215012I None    T12S, I15V, L19I, M36I, R41K, Q61H, L63P, H69K, L89M, I93L  
RL215013I RL215013I None    T12S, K14R, I15V, L19I, N37C, L63P, H69K, K70R, V82I, L89M, I93L  
RL215025I RL215025I None    E35D, N37D, K43R, I62V, L63P  
RL215030I RL215030I None    T12S, K14R, I15V, L19T, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
RL215042I RL215042I None    E35D, L63P, V77VI, I93L, L97LF  
RL215050I RL215050I None    K14R, L19I, M36V, R41K, R57K, L63P, E65D, A71V, I93L  
RL215054I RL215054I None    T12P, L19V, E35D, I62V, L63P, I93L  
RLDR001I RLDR001I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
RLDR034I RLDR034I None    T12I, I13V, E35D, R57K, L63P, A71V, V77I, I93L  
RLDR035I RLDR035I None    T12P, L19I, E35D, M36I, L63P, I93L  
RLDR043I RLDR043I None    I13V, K20R, E35D, M36I, R41K, H69K, L89M  
RLDR07I RLDR07I None    T12P, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
RLDR08I RLDR08I None    E35D, R41K, D60E, L63P, I93L  
RLDR09I RLDR09I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, T74A, I93L  
RLDR17I RLDR17I None    K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
RLDR20I RLDR20I None    K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
RLDR25I RLDR25I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
YJ217006I YJ217006I None    T12S, K14R, I15V, L19I, M36IV, R41K, L63S, H69K, K70KR, V82VI, L89M, I93L  
YJ217010I YJ217010I None    E35D, D60E, I62V, L63P, I64L, I93L  
YJ217013I YJ217013I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
YJ217016I YJ217016I None    T12S, K14R, I15V, L19I, M36I, N37NI, R41K, L63P, H69K, K70KR, L89M, I93L  
YJ217036I YJ217036I None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
YJ217040I YJ217040I None    T12S, K14KR, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
YJ217055I YJ217055I None    T12S, K14R, I15V, L19T, M36I, R41EK, L63P, H69K, K70R, V82VI, L89M, I93L  
YJ227203IA YJ227203IA None    T12S, K14R, I15V, L19I, M36V, R41K, I62V, L63P, A71V, I93L  
YJGA473I YJGA473I None    E35D, I62V, L63P, V77I, I93L  
YJGA479I YJGA479I None    T12A, K14R, I15V, G17D, L19I, M36I, N37D, R41K, Q61H, L63P, H69K, I93L  

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