Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Wu (2013)
Title New emerging recombinant HIV-1 strains and close transmission linkage of HIV-1 strains in the Chinese MSM population indicate a new epidemic risk.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 133
NumPts 133
Subtype CRF01_AE, B, C

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 133 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
AQP118 AQP118 None    K20R, E35D, M36I, R41K, H69K, L89M  
AQP120 AQP120 None    L19LIV, E35D, R41K, D60E, L63P, A71AV, I93L  
AQP121 AQP121 None    T12TKN, E35D, R41RK, R57K, L63T, I64L, A71V, I72V, V77I, I93L  
AQP23 AQP23 None    K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
AQP24 AQP24 None    K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
AQP25 AQP25 None    T12A, E35D, R41K, L63P, I93L  
AQP26 AQP26 None    T12E, E35D, R41K, D60E, L63P, I93L  
AQP28 AQP28 None    I13V, E35D, R41K, D60E, L63P, A71V, I93L  
AQP29 AQP29 None    I13V, E35D, R41K, D60E, L63P, A71V, V77I, I93L  
AQP31 AQP31 None    E35D, R41K, L63P, V82I, I93L  
AQP32 AQP32 None    E35D, R41K, D60E, I62V, L63P, I93L  
ASP129 ASP129 None    G16E, E35D, M36I, R41K, H69K, K70R, L89M  
BB77Frag1 BB77Frag1 None    I13V, G16E, E35D, M36I, R41K, H69K, K70KR, V77I, L89M  
BBP16 BBP16 None    E35D, M36I, R41K, L63P, H69K, L89M, I93L  
BBP19 BBP19 None    E35D, M36I, R41K, H69K, L89M, F99L  
BBP76 BBP76 None    E35D, M36I, R41K, L63P, H69K, L89M, I93L  
BBP78 BBP78 None    E35D, M36I, R41K, I62V, L63P, H69K, L89M  
BBP80 BBP80 None    K20R, E35D, M36I, R41K, L63T, H69K, K70R, L89M, I93L  
BBP81 BBP81 None    I13V, E35D, M36I, R41K, L63P, H69K, L89M  
BBP82 BBP82 None    T12P, L19M, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
BZP60 BZP60 None    G16E, E35D, R41K, D60E, I62V, L63P, I93L  
CZP15 CZP15 None    L19V, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
FY64 FY64 None    I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
FYP62 FYP62 None    G16E, M36I, L63P, H69K, L89M, I93L  
FYP65 FYP65 None    L19V, E35D, L63P, A71T, I72V, V77I, V82VI, I93L  
FYP66 FYP66 None    V11VI, I13V, L19I, E35D, M36I, R41K, R57K, H69K, L89M  
FYP67 FYP67 None    T12P, L19M, E35D, M36I, R41K, L63P, H69K, V77VL, L89M, I93L  
HBP130 HBP130 None    A22AV, L23LF, T31TP, E35D, M36IV, R41K, L63A, H69K, V82VI, L89M  
HBP132 HBP132 None    I13V, L19I, E35D, M36I, R41K, R57K, H69K, L89M  
HF104 HF104 None    T12S, K14R, L19I, N37S, R41K, L63S, H69K, K70R, I72T, V82I, L89M, I93L  
HF115 HF115 None    I13V, E35D, M36I, R41K, H69K, L89M N98C 
HFP100 HFP100 None    I15V, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, K70R, L89M, I93L  
HFP102 HFP102 None    L19LFI, E35D, M36L, N37D, R41K, D60E, L63P, I93L  
HFP103 HFP103 None    G16E, E35D, M36I, R41K, H69K, V77I, L89I  
HFP105 HFP105 None    E35D, R41K, D60E, L63P, I93L  
HFP106 HFP106 None    E35D, R41K, D60E, L63P, I93L  
HFP108 HFP108 None    K20KR, E35D, M36I, R41K, R57K, L63P, H69K, K70R, V77I, L89M, I93L  
HFP109 HFP109 None    V11I, E35D, M36I, R41K, H69K, L89M  
HFP111 HFP111 None    E35D, R41K, D60E, L63P, I93L  
HFP112 HFP112 None    K20R, E35D, M36I, R41K, H69K, K70R, L89M, I93L  
HFP113 HFP113 None    L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
HFP114 HFP114 None    E35D, R41K, D60E, L63P, V75I, I93L  
HFP116 HFP116 None    K14R, E35D, N37T, R41K, I62V, L63N, I64L, A71V, I93L  
HFP83 HFP83 None    L10LI, G16GE, L19I, K20R, E35D, M36I, R41K, R57RK, L63ST, H69K, K70KR, L89M, I93L  
HFP84 HFP84 None    G17GE, E35D, R41K, D60E, L63P, A71AV, I93L  
HFP85 HFP85 None    I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M  
HFP86 HFP86 None    V11I, E35D, M36I, R41K, H69K, L89M  
HFP88 HFP88 None    E35D, M36MI, R41K, D60E, I62V, L63P, I93L  
HFP89 HFP89 None    G16GE, K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
HFP90 HFP90 None    E35D, M36I, R41K, H69K, L89M, I93L  
HFP91 HFP91 None    Q18E, K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
HFP93 HFP93 None    I13V, G16E, E35D, M36I, R41K, R57K, H69K, L89M, Q92K  
HFP94 HFP94 None    I13V, E35D, R41K, D60E, I62V, L63P, I93L  
HFP95 HFP95 None    E35D, R41K, D60E, L63P, I93L  
HFP96 HFP96 None    E35D, R41K, D60E, L63P, I93L  
HFP98 HFP98 None    I15IV, K20R, E35D, M36I, R41K, Q61E, L63P, H69K, K70R, L89M, I93L  
HNP01 HNP01 None    E35D, M36I, R41K, H69K, L89M  
HNP02 HNP02 None    I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
HNP04 HNP04 None    E35D, M36I, R41K, Q61E, L63P, H69K, K70R, L89M  
HNP05 HNP05 None    Q18QE, L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70KR, L89M, I93L  
HNP06 HNP06 None    L10V, K20R, E35D, M36I, R41K, H69K, L89M  
HNP07 HNP07 None    E35D, I62IV, L63P, A71AV, I72E, V77I, I93L G51G* 
HNP08 HNP08 None    G16GE, K20KR, E35D, M36I, R41K, L63X, H69K, L89M, I93L  
HNP09 HNP09 None    E35D, M36I, R41K, H69K, L89M  
HNP10 HNP10 None    T12P, L19V, E35D, R41K, D60E, L63P, I93L  
HNP12 HNP12 None    K20R, E35D, M36I, R41K, L63LP, H69K, L89M, I93L  
HSP35 HSP35 None    E35D, R41K, D60E, L63P, A71T, I93L  
HSP37 HSP37 None    L10LI, E35D, R41K, D60E, L63P, A71AV, I72IT, V77I, I93L  
HSP38 HSP38 None    E35D, M36I, R41K, R57K, H69K, L89IM, I93M  
LAP40 LAP40 None    I13V, E35D, R41K, D60E, L63P, A71V, V77I, I93L  
LAP41 LAP41 None    Q18E, K20R, E35D, M36I, R41K, I62IV, L63P, H69K, K70R, L89M, I93L  
MAS127 MAS127 None    E35D, R41K, D60E, L63P, V77I, I93L  
MASP125 MASP125 None    E35D, R41K, L63P, I93L  
MASP128 MASP128 None    G16E, K20KR, E35D, M36I, R41K, L63LP, H69K, K70R, L89M, I93L  
MASP22 MASP22 None    I13V, G16E, E35D, M36I, R41K, H69K, L89M  
SZP133 SZP133 None    G16E, E35D, M36I, R41K, L63C, H69K, K70R, L89M  
SZP136 SZP136 None    T4TA, I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
TLP122 TLP122 None    E35D, R41K, D60E, L63P, I93L  
TLP123 TLP123 None    L19I, K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
TLP124 TLP124 None    E35D, R41K, D60E, L63P, I93L  
WH69 WH69 None    T12A, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
WH73 WH73 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
WHP52 WHP52 None    V11I, L19V, E35D, M36I, R41K, H69K, K70KR, I72IV, L89M  
WHP53 WHP53 None    E35D, R41K, D60E, L63P, I93L  
WHP55 WHP55 None   L33F I13V, Q18L, L19M, M36I, R41K, L63I, H69K, L89M, I93L  
WHP56 WHP56 None    Q18E, K20R, E35D, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
WHP57 WHP57 None    E35D, M36I, R41K, H69K, L89M  
WHP68 WHP68 None    G17E, E35N, M36I, R41K, I62V, H69K, L89M  
WHP70 WHP70 None   L33F I13V, Q18L, L19M, M36I, R41K, C67Y, H69K, L89M, I93L  
WHP71 WHP71 None    T12TK, I13IV, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
WHP72 WHP72 None    E35D, R41K, D60E, L63P, V77VI, V82I, I93L  
WHP74 WHP74 None    E35D, R41K, D60E, L63P, A71AV, I93IL  
WHP75 WHP75 None    E35D, M36I, R41K, L63S, I64IM, H69K, K70R, L89M  
XCP138 XCP138 None    E35D, N37ND, R41K, D60E, L63P, A71T, I72V, V77I, I93L  
XCP42 XCP42 None    E35D, M36I, R41K, H69K, L89M  
XCP45 XCP45 None    T12S, I15V, L19Q, N37S, R57K, Q61QE, I62IV, L63PS, C67CY  
XCP47 XCP47 None    E35D, R41K, D60E, L63P, I93L  
XCP48 XCP48 None    E35D, R41K, D60E, L63P, I93L  
XCP49 XCP49 None    T12P, L19IM, E35D, M36I, R41K, K43R, H69K, V82VI, L89M  
XCP51 XCP51 None    K20R, E35D, M36I, R41K, H69K, L89M  

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