Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kijak (2013)
Title HIV-1 prevalence and subtype distribution in HIV-1 positive volunteers deferred from enrollment in a phase III prime-boost HIV-1 vaccine trial in Thailand
Citation J Virol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 42
NumPts 42
Subtype CRF01_AE, B

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
03TH700065 03TH700065 None    K14R, N27G, V32I, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V201I, T218S, L234I, S283G  
03TH700078 03TH700078 None    N27S, V32I, L45V, I72V, T112V, T125A, G134N, I135V, K136R, R187K, K188R, V201I, T218S, L234I, S283G  
04TH107542 04TH107542 None    K14R, S24N, L28I, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
04TH228466 04TH228466 None    K14R, A21T, S39N, L45Q, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V201I, L234I, S283G  
04TH312908 04TH312908 None    K14R, A21T, S39N, I72V, Q95N, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
04TH317223 04TH317223 None    V31I, I72V, T124N, T125A, V126I, A128V, V201I, K211R, Q216H, S230N, R231K  
04TH321566 04TH321566 None    K14R, A21T, A23V, V31I, S39N, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
04TH322500 04TH322500 None    V88I, L101I, T112I, T124N, T125A, V151I, G163S, D256E, S283G  
04TH328531 04TH328531 None    K14R, A21T, D25E, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, K160R, D167E, V201I, K211R, L234I, S283G  
04TH409819 04TH409819 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, K160R, D167E, V201I, L234I, S283G  
04TH423323 04TH423323 None    K14R, A21T, A23V, S39N, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136H, V165I, D167E, V201I, L234I  
04TH427990 04TH427990 None    E11D, V32I, I72V, T112V, T125A, V126M, G134N, I135V, K136R, D167E, S195T, V201I, I203M, L234I, S283G  
04TH505841 04TH505841 None    E11D, S24N, D25E, V31I, S39N, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136H, D167E, V201I, K211R, Q216H, L234I, S283G  
04TH601066 04TH601066 None   E157Q V31I, I89M, L101I, S119R, T124N, T125S, K156N, K160T, S230N  
04TH613543 04TH613543 None    K14R, A21T, S39N, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234V, S283G  
04TH704320 04TH704320 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, M154I, V165I, V201I, L234I, S283G  
04TH801743 04TH801743 None   T97A K14R, A21T, V31I, S39N, I60M, I72V, T112V, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, L234I, V259I, S283G  
04TH803686 04TH803686 None    E11D, K14R, S17T, I72V, L101I, T124A, I135V, G163E, L234I  
04TH807015 04TH807015 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, M154L, V165I, D167E, V201I, L234I, S283G  
04TH808998 04TH808998 None    K14R, A91T, I113V, S119R, T125S, S195N, K211R, R231K, L234V, Q285QR  
04TH817196 04TH817196 None    K14R, A21T, V31I, S39N, L68I, I72V, T112V, T124A, T125A, V126M, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
04TH821921 04TH821921 None    S17N, V31I, L101I, T112A, I113L, T124N, T125A, V165I, T218S  
05TH127331 05TH127331 None    K14R, S17SN, S24DN, L28I, L45V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, I203IM, L234I, S283G  
05TH130087 05TH130087 None    E10D, K14R, A21T, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, L234I, D253E, S283G  
05TH245651 05TH245651 None    K14R, A21T, A38K, S39N, I72V, L101I, T112V, T124N, T125A, G134N, I135V, K160R, G163E, D167E, E198D, V201I, L234I, S283G  
05TH327568 05TH327568 None    K14R, A21T, L68V, I72T, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, M154I, D167E, V176L, V201I, L234I, S283G  
05TH342968 05TH342968 None    E11D, K14R, A21T, N27S, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
05TH355614 05TH355614 None    K7R, S17N, L28I, I84M, L101I, T124A, T125A, M154L, K211Q  
05TH356764 05TH356764 None    E11D, A23V, I72V, T125A, V201I, K215N, R231K, D232E, L234F, D253H, S255N, K273R  
05TH356883 05TH356883 None    E11D, A23V, V31I, I72V, V201I, K215N, R231K, D232E, L234F, D253H  
05TH357801 05TH357801 None    S17N, L101I, T124A, T125A, I135V, K136N, I162V, T206S, D256E, D279G, R284G  
05TH429730 05TH429730 None    K71Q, S119R, T125S, F181L, I203M, K211R, S230N, A265V  
05TH440248 05TH440248 None    S17N, L28I, G70E, L101I, T112M, S119R, T124N, T125S, K211R  
05TH443479 05TH443479 None    E11D, A21T, A23T, V31I, S39N, I72V, T112V, S119T, T124A, T125A, G134N, I135V, K136R, K160R, V165I, D167E, V201I, K211R, L234I, S283G  
05TH518944 05TH518944 None    E11D, R20K, L101I, E157D, G193E, D256E, Q274R, S283G  
05TH522586 05TH522586 None    E11D, K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, M154I, V165I, D167E, V201I, K211R, L234I, S283G  
05TH637314 05TH637314 None    K14R, A21T, V31I, S39N, I72V, P90S, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, K211R, L234V, S283G  
05TH645189 05TH645189 None    E11D, S24N, I60M, S119P, T125A, I135V, M154L, V165I, V201I  
05TH736580 05TH736580 None    D25E, T112I, T125I, V201I  
05TH741452 05TH741452 None    E11D, K14R, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, G193D, S195C, V201I, I208L, L234I, S283G  
05TH841749 05TH841749 None    K14R, R20K, V31I, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, G193E, V201I, L234I, K273R, S283G  
05TH852327 05TH852327 None    K14R, A21T, V31I, I84V, T112I, T124Q, T125A, D167E, K211R, S230N, S283G  

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