Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Avila-Rios (2012)
Title National prevalence and trends of HIV transmitted drug resistance in Mexico
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 1639
NumPts 1639
Subtype B, CRF12_BF

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 1639 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
B000F85PS1 B000F85PS1 None None   K20R, V60I, D123E, I135M, S162H, P243T, E248D, K263N, N265I, A272P, I274V, K277R, E302D, E305K, K311R  
B000FD0JS2 B000FD0JS2 None None   K20R, E28K, K32E, V60I, F171FY, Q197E, R211K, F214L, V245E, V292I, E312Q  
B000FDAAS3 B000FDAAS3 None None   K102KR, K122P, I135R, S162C, D177E, V245M, A272P, K277R, T286A, P294T, E297K, S322T, I329L L100L* 
B000FEACS4 B000FEACS4 None None   V35I, R83K, D123E, A158S, S162SN, D177E, A272P, E297K, K311R, V317VA, Q334H  
B000FH7OS5 B000FH7OS5 None None   I50IV, V60I, S68SG, R83RK, K122P, D177E, R211K, A272P, P294T, L295M, E297K, S322A  
B000FMEBV6 B000FMEBV6 None None   V60I, D123E, I135M, S162Y, R211K, A272P, V276I, K277R, K281R, T286A, I293V, E297K, S322T, I329L  
B000F_0QS0 B000F_0QS0 None None   T27TS, D123E, I135R, S162C, D177E, G196E, T200TA, R211K, T286A, A288S, I293IV, I326V, Q334L  
B000M7BGT7 B000M7BGT7 None None   D123E, S162C, D177E, G196E, I202V, R211K, V241I, A272P, K277R, T286A, T296S, E297K, I326V, I329L  
B000M90OT8 B000M90OT8 None None   D123E, I178IM, T200I, R211K, Q278H, T286P, I293V, I326V  
B000M90TS9 B000M90TS9 None None   K32N, V35K, T39A, K102Q, S105A, K122E, I135T, S162C, K173Q, I178IM, T200A, R211K, A272P, T286A, K311R T296Q 
C18TME0SSR C18TME0SSR None None   T69S, D123E, D177E, T200A, I202V, Q207A, R211K, K277R, P294T, E312T, G333E  
C200FA0NSS C200FA0NSS None None   V35I, K122E, D123S, I135RT, I178IM, T200TA, Q207E, R211K, A272S, I293V, P294Q, K311R, E312T, Q334L  
C200FD0TQT C200FD0TQT None None   A98S, D123E, I135IT, R172RK, D177E, I178M, T200A, Q207E, I293V, P294PS, T296S, E298EA, E312T, Q334L  
C200FI0TCU C200FI0TCU None None   T39A, A98S, D123EK, S162C, Q174E, D177E, T200A, Q207H, R211K, A272T, T286TA, I293V, Q334E  
C200M63RQV C200M63RQV None None   K122P, S162C, D177E, T200A, R211K, A272P, T286A, I293V, P294A, E297R, Q334L  
C200M90NSW C200M90NSW None None   D123E, I178M, T200A, Q207G, R211K, V245K, E312T, Q334L  
C200MB0JQX C200MB0JQX None None   V35VI, A98S, D123E, I135T, Q174QK, D177E, I178M, T200A, I202IV, Q207EG, R211RK, L283LI, I293V, T296S, E312T, Q334L  
C200MB8NSY C200MB8NSY None None   P9Q, V35IT, D123E, I135T, I142V, S162N, Q174K, D177E, Q197K, T200A, Q207A, R211K, K277KR, P294Q  
C200ME6KRZ C200ME6KRZ None None   V35I, K64KR, D86E, D123E, I142V, D177E, G196E, A272P, V276T, K277R, L283I, E291ED, V292I, I293IV, E297A, Q334E  
JC00MF0QRV JC00MF0QRV None None   K82R, R83K, K101S, K103R, S162C, K173T, Q174K, G196E, T200V, E203ED, R211RK, V245E, R284K, T286A, I293V, E297K, E308Q, K311R, I329L  
JC00MG0OTW JC00MG0OTW None None   V60I, K102Q, K103R, K122E, I135V, S162SC, S163ST, F214L, K277R, T286A, I293V, E297A, V317A, Q334E  
JC00MH5MWX JC00MH5MWX None None   V21I, V60I, K103R, K122E, D123N, D177E, I178IM, V179IT, A272P, E297A, I326V, Q334E  
JCE0M9DKTY JCE0M9DKTY None None   K20R, K103R, D123E, S162C, E169D, D177E, V179I, R211K, Y271F, A272P, A288S, E297K, S322T, D324E, Q334E  
JCE0MA2HTZ JCE0MA2HTZ None None   K20KR, K64KR, K103KR, D123DE, I135IV, I142IT, S162SC, E169ED, D177DE, V179VI, G196X, I202IV, Q207QHR, R211K, T215X, V245VE, Y271YF, A272P, K277KR, A288AS, V292VI, I293V, E312D, S322T, L325LV, Q334L  
JCV0M7KFU0 JCV0M7KFU0 None None   K32KR, V35T, T39L, E40D, K102R, K103R, V118I, D121H, K122E, I135T, S162C, K173KR, G196E, T200A, Q207H, R211T, F214L, V276I, T286A, E297K  
JCV0MCBAF1 JCV0MCBAF1 None None   K103R, V118I, K122E, I135T, S162C, G196E, Q207H, R211K, F214L, T286A, E297K, K311R  
JD00MH0NU2 JD00MH0NU2 None None   D123E, Q174R, D177E, Q207E, R211K, T286A, A288T, V292I, I293V, E297Q  
JE00FF0TS3 JE00FF0TS3 None None   S48E, K82R, D123E, S134R, T200AV, R211Q, F214L, V245M, A272P, V276I, T286A, A288S, P294T, V317A, Q334G Q145R, Y146H 
JE00M70NR4 JE00M70NR4 None None   K122E, I135T, S162C, F171Y, T200TA, I202V, Q207H, R211K, A272P, K277R, T286A, E297Q, V317A, Q334M A129AG 
JE00M7CIS5 JE00M7CIS5 None None   E169D, I195L, I202V, A272P, V276I, K277R, T286A, I326V  
JE00M9HJU7 JE00M9HJU7 None None   V35M, T39S, R83K, I178M, R211K, T286A, Q334V  
JE00M9_OR6 JE00M9_OR6 None None  V106I K122P, I135T, S162C, T200TP, Q207QE, L210LM, R211K, F214L, E224ED, V245I, A272P, D324DE, I329L R199RS, I326F 
JE00MA1TR8 JE00MA1TR8 None None   V35VI, S162C, T200A, R211K, K277R, T286TA, E305X, S322T  
JE00MB1TN9 JE00MB1TN9 None None   D123E, E169D, D177E, V245M, K277KR, Q278E, I293V, I329L  
JE00ME0ORA JE00ME0ORA None None   E6D, I50V, R83K, K102Q, D121Y, K122E, D123E, I135T, S162A, I178L, V245E, A272P, V292I, E297K, L301I  
JE00MGAIUB JE00MGAIUB None None   K20KR, V35VL, K122E, D123NS, E169D, I202V, Q207K, R211S, A288S, I293V, P294S, E297A, V317T, Q334L  
JE00MJ2QYC JE00MJ2QYC None None   K173N, Q174K, R211K, F214FL, A272P, K281R, P294T  
JE00MK2MTD JE00MK2MTD None None   K20R, V60I, D121Y, K122E, K166R, K173T, T200A, Q207E, R211K, A272P, V292I, I329V  
JE00MN0NSE JE00MN0NSE None None   V35M, S48T, V60I, A272P, I274IV, K281R, T286A, P294T, Q334E  
JEU0F9BJSF JEU0F9BJSF None None  V108VI K82KR, D86E, K122P, D123E, D177E, T200A, Q207X, A272G, A288S, I293V, E297V  
JF00F898SG JF00F898SG None None   E6D, K49Q, S68G, K122E, D123N, I135T, T200I, K223KQ, A272P  
JF00FD1OUH JF00FD1OUH None None   K32N, V60VI, D121H, K122E, D123E, I135K, S162X, K166KR, D177E, G196E, T200A, R211A, A272P, K277R, T286A, I293V, P294T, L295M, Q334E  
JF00M83JPI JF00M83JPI None None   P4X, V35T, K122E, D123S, P176Q, A272P, K277KR, K281R, T286P, E291K, I293V, P294PST, E297K, S322T, I329L V292G 
JF00M918RJ JF00M918RJ None None   E6D, A98S, D121H, K122E, D177E, Q278H, I293V, E312A  
JF00MCBOSK JF00MCBOSK None None   V60VI, K122E, D123E, I135T, I142V, T200A, I202V, E248D, A288S, I293V, P294T, V317A, I326V  
JFJ0MG0SRL JFJ0MG0SRL None None M184V V106I, Y188L K122P, S162N, D177N, V189I, Y232H, K249Q, P294T, K311R, Q334E  
JFM0ME0SQM JFM0ME0SQM None None   K122KE, T200TI, Q207E, R211K, D250DE, A272PS, I274IV, K281R, T286TA, I293V, Q334E  
JGKOMA5HQN JGKOMA5HQN None None M41L, L210W, T215D  K20R, V35I, T39A, R83K, A98S, K102KQ, D123E, I135T, K173R, Q207K, R211K, V245E, D250E, A272S, K275R, L283I, K287KR, I293V, P294Q, Q334E  
JI00M79LXO JI00M79LXO None None   V35M, T39A, S48T, V60I, E169D, Q174K, G196E, F214L, A272P, K277R, T286TA, I293V, E297AV  
JKM0M90OSP JKM0M90OSP None None   V35VI, E53ED, K70X, I135T, I202V, R211K, I293V, E297R, I329V  
JM00M_2MTQ JM00M_2MTQ None None  V106I T39A, K122E, D123DE, I142V, S162C, I178L, G196E, T200A, I293V, I329L  
JS00M91PTR JS00M91PTR None None   V35IT, T69TN, A98S, I142V, T165I, Q197P, T200A, Q207E, R211K, L283I, I293V, D324E  
JS00MC8BRS JS00MC8BRS None None   S68G, T69N, R72RK, K104T, I142V, S162F, G196E, P225PS, A272P  
JT00M91OST JT00M91OST None None   T69S, R83K, V90I, K122KQ, D123DE, I135V, E169K, K173E, G196E, T200A, R211K, V245VM, A272S, V276I, L283I, A288T, I293V, Q334E  
JT00MEFKSU JT00MEFKSU None None   K20R, T69S, R83K, K102R, D123E, I135IV, Q207E, A272P, I293V, E297A, V317A, I329V  
JV00FC2CRV JV00FC2CRV None None   K32Q, V35VI, T39TAP, D86E, K102R, V118I, I135R, K173E, R211K, F214L, A272P, V276T, I293V, E297N  
JV00FG3MTW JV00FG3MTW None None   V35I, S48T, V118I, D123E, T200A, R211Q, F214L, V245M, A272P, V276I, P294T, Q334V K13K* 
JV00M8T5WX JV00M8T5WX None None   V35M, E40D, V60I, K104R, V118I, D123N, I135T, I142L, T165I, G196E, F214L, A272S, K277R, I293V, E297A  
JV00MD9ITY JV00MD9ITY None None   K20R, D86E, V118I, K122P, I135T, D177E, I178M, R211G, F214L, V245IM, A272P, Q334S  
JV00ME5JYZ JV00ME5JYZ None None   V35VI, K102R, V118I, K122E, I135T, S162C, Q174L, G196E, T200A, Q207H, R211K, F214L, A288T, I293V, E297Q  
JV00MEEOR0 JV00MEEOR0 None None   E6N, V8I, V118I, D123E, I135R, I178L, T200I, R211K, F214L, V245E, K277R, T286A, P294PST, E297K, I329L  
JVW0MA1TQ1 JVW0MA1TQ1 None None  V179VD K32Q, V35VL, K104KR, V118I, K122E, D123DN, I135R, K173E, T200TA, R211K, F214L, S251SI, A272P, I293V, Q334L  
JW00FF6NR2 JW00FF6NR2 None None  V179D I50V, V60I, R83K, D123E, I135RT, T165I, D177E, R211K, A272P, K277KR, K281R, L283I, I293V  
JW00M62RU3 JW00M62RU3 None None  V179E V35I, E40D, R83K, K122P, Q197QL, T200X, R211K, K277R, A288S, I293V, E297V, S322T  
JW00MB0UT4 JW00MB0UT4 None None  V179D K102KM, K173E, Q207E, R211RK, V245Q, A272P, I293V, K311KR, V317A, I329L  
JX00FD7HS5 JX00FD7HS5 None None  V179E K102Q, K104R, K122E, I135T, D177E, I202V, R211K, A272P, K277R, I293V  
JX00M51TS6 JX00M51TS6 None None  V179E M16V, V35I, E40D, R83K, K122P, Q174QR, D177DG, T200A, I202V, R211K, A288S, I293V, E297V, S322A  
JY00M68ES7 JY00M68ES7 None None V75M  V35I, T39A, D86N, D123E, I135V, T165I, D177E, I178M, T200I, Q207QR, R211K, V245E, A272P, T286P, I293V, E297K, V317A, Q334L  
JY00MD1SJ8 JY00MD1SJ8 None None   K46Q, V75VL, K102Q, K104R, K173KR, Q174QK, V179VA, G196GE, R211K, V245VE, A272AG, V292VI, I293V, E297K  
M000F43KN9 M000F43KN9 None None   K20KR, V60I, K102Q, D123E, N175NH, I178M, T200A, K249Q, S251I, K277R, V292I, I293V, E297K, D324E  
M000F53I8A M000F53I8A None None   K20KR, E79D, D123E, S162C, Q174QK, Q207A, R211K, A272P, I293IV, E297V, E312T, V317A, S322AT  
M000F65FRB M000F65FRB None None   V35VI, R83RK, D123E, I135X, E291D, P294T, L301I  
M000F74PWC M000F74PWC None None   S162C, D177E, Q207E, R211K, V245E, D250E, W252Y, K277R, E312T, Q332P, G333R  
M000F84HTD M000F84HTD None None   K122P, I135M, S162C, K173E, V245M, A272P, K277R, A288S, E297Q, D324E, Q334L  
M000F90KJE M000F90KJE None None   V60I, K122P, I142V, K166R, D177E, T200A, R211K, V245I, D250E, A272P, P294A, Q334L  
M000F95KVF M000F95KVF None None   K122P, I135M, S162C, R211K, V245M, A272P, K277R, A288S, E297Q  
M000F98KTG M000F98KTG None None   P4L, V35T, E40D, D123E, K281R, T286A, I293V, P294T, E297K, L325I  
M000F9DHTH M000F9DHTH None None   K102R, K122P, I135M, S162C, G196E, V245M, A272P, K277R, A288S, E297Q  
M000FA3HVI M000FA3HVI None None   K32R, R211RK, F214L, P243Q, I293V, V317A, Q334L  
M000FC4NSJ M000FC4NSJ None None   D86E, K122AE, D123X, I135IT, D177E, G196E, T200TA, A272S, I326L, I329V  
M000FCBKBK M000FCBKBK None None   R83K, K102R, K122E, I135T, I178L, V179I, G196E, V245M, A272P, K275R, A288S, E297K, Q334L  
M000FD4RPL M000FD4RPL None None   I135T, I202V, R211K, K277R, T286A, E291ED, V292I, I293V, P294PQ  
M000FDDEVM M000FDDEVM None None   V35M, I135V, K173E, D177E, I178M, E203D, E204K, Q207D, R211K, V292VI, I293V, K311R, E312T, I326V, Q334L Q197M 
M000FE2QSN M000FE2QSN None None   K49R, V60I, I135T, T200I, A272P, I293V, I329L  
M000FK3NVO M000FK3NVO None None   V60I, D86DE, K122P, I142V, D177E, I178M, T200A, R211K, V245I, D250DE, A272P, P294A, Q334LP K49KN, L100L* 
M000M5THTS M000M5THTS None None   K20R, V35I, E36EK, D123E, I135T, S162C, I195L, Q197K, R211K, A272P, E297A  
M000M65MPT M000M65MPT None None   A33X, V35I, A98S, K102R, D123E, D177E, V245M, A272P, K277R, T286A, P294S, E297K  
M000M65MUU M000M65MUU None None   K122E, I135T, K173Q, T200A, R211K, V317A, Q334K  
M000M68HSV M000M68HSV None None   V35I, S68G, K102Q, P133PL, I135V, I178M, R211K, V292I, I293V, E297A  
M000M6ASVW M000M6ASVW None None   R83K, K122P, I135T, K173E, Q174K, D177E, V245I, E248D, A272P, Q278H, A288S, P294V, V317A, Q334L  
M000M6DGVX M000M6DGVX None None   V60VI, K122E, D123E, I135R, S162SN, Q174K, G196E, R211A, A272S, V292I, I293V, E297A, V317A, S322T  
M000M6OGOY M000M6OGOY None None   R83K, V90I, K122P, I142V, S162C, D177E, T200A, V245IM, E248DN, D250E, A272P, V276IT, K277KR, T286A, A304E, Q334L  
M000M76LRZ M000M76LRZ None None   E6D, K104R, D123E, D177E, I178V, T200I, F214L, V292I, I293V, E297A  
M000M7D3W0 M000M7D3W0 None None   V60I, K122P, I135T, I142V, D177E, T200A, R211K, V245I, D250E, A272P, V276I, P294A, E297Q, I329V, Q334L  
M000M81QU1 M000M81QU1 None None   K122P, I135M, S162C, K173E, I178L, V245M, A272P, K277R, A288S, E297Q, K311KR, D324E, Q334L  
M000M82JW2 M000M82JW2 None None   A98S, I142V, S162A, G196E, R211A, A272AG, K277R, V292I, I293V, S322ST, I329L  
M000M82NW3 M000M82NW3 None None K219KQ  V60I, E79ED, K122P, D123E, I142V, D177E, T200A, R211K, V245I, D250E, A272P, V276I, Q334L  
M000M_CBVP M000M_CBVP None None   V35I, K122E, I135V, I142T, P176Q, F214L, T286A, I293V, E297A, V317T, Q334L  
M000M_FAQQ M000M_FAQQ None None   V8I, K122E, I135T, G196E, Q207E, R211K, V245K, V276I, L283I, I293V  
M000M_JIVR M000M_JIVR None None   K49R, I135T, S162C, K173Q, I178L, R211K, A272P, P294T, T296S, I326V, I329L  

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