Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ngo-Giang-Huong (2011)
Title Resistance patterns selected by nevirapine vs. efavirenz in HIV-infected patients failing first-line antiretroviral treatment: A bayesian analysis.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 32
NumPts 32
Subtype CRF01_AE, B

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
PHPT0279 PHPT0279PR-RT None    G16A, M36I, R41K, H69K, L89M, I93L  
PHPT0375 PHPT0375PR-RT None   L33F L10I, I13V, E35D, M36I, R41K, G68E, H69K, K70R, L89IM  
PHPT0650 PHPT0650PR-RT None    I13V, E35D, M36I, R41K, R57K, L63S, H69K, K70R, L89M  
PHPT0773 PHPT0773PR-RT None    E35D, M36I, N37D, R41K, H69K, L89M  
PHPT1216 PHPT1216PR-RT None    L10I, I13V, E35D, M36I, R41K, H69K, L89M  
PHPT1374 PHPT1374PR-RT None    L10LV, T12TP, I13V, I15IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
PHPT1567 PHPT1567PR-RT None    I13V, E35D, M36I, R41K, H69K, L89M  
PHPT1601 PHPT1601PR-RT None    L10LI, I13V, G16E, E35D, M36I, R41K, R57K, I62IV, H69K, L89M  
PHPT1681 PHPT1681PR-RT None    E35D, M36I, R41K, R57K, H69K, L89M  
PHPT1796 PHPT1796PR-RT None    K20R, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
PHPT1927 PHPT1927PR-RT None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
PHPT2442 PHPT2442PR-RT None    L33V, R41K, I62T, L63PQ, I64V, A71T, I93L  
PHPT2464 PHPT2464PR-RT None    L10I, Q18E, E35D, M36I, H69K, L89M  
PHPT2522 PHPT2522PR-RT None    L10V, I13V, K14R, G16E, E35D, M36I, N37E, R41K, H69K, K70R, L89M  
PHPT2601 PHPT2601PR-RT None    K20R, E35D, M36I, N37D, R57K, L63A, H69K, L89M  
PHPT2709 PHPT2709PR-RT None    L10I, I13V, M36I, R41K, H69K, L89M  
PHPT2780 PHPT2780PR-RT None    I13V, E35D, M36I, R41K, H69K, L89M  
PHPT2915 PHPT2915PR-RT None    E35D, M36I, R41K, H69K, L89M  
PHPT2944 PHPT2944PR-RT None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
PHPT2972 PHPT2972PR-RT None    L10I, T12A, I13V, E35D, M36I, R41K, R57K, H69K, L89I  
PHPT4015 PHPT4015PR-RT None    I13V, I15V, K20I, M36I, H69K, I72E, V82I, L89M  
PHPT4016 PHPT4016PR-RT None    I13V, E35D, M36I, R41K, H69K, L89IM  
PHPT4028 PHPT4028PR-RT None    I13IV, E35D, M36I, R41K, H69K, K70R, L89M  
PHPT4078 PHPT4078PR-RT None    L10I, T12A, L19V, E35D, L63P, A71T, I93L  
PHPT4163 PHPT4163PR-RT None    I13V, I15IV, K20KI, E35D, M36I, R41K, K43KR, R57RK, H69K, V82I, L89M, T91V  
PHPT4352 PHPT4352PR-RT None    T12A, K14R, I15IV, G16GA, Q18QL, R41K, H69K, V82I, L89M, I93L M36D 
PHPT4397 PHPT4397PR-RT None    L10IV, I13V, I15V, G16E, K20KI, E35D, M36I, R41K, H69K, L89M  
PHPT4484 PHPT4484PR-RT None    I13V, E35D, M36I, R41K, H69K, I72V, L89M  
PHPT4619 PHPT4619PR-RT None    I13V, E35D, M36I, N37ND, R41K, H69K, L89M  
PHPT4703 PHPT4703PR-RT None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
PHPT4771 PHPT4771PR-RT None    L10N, K20KR, M36I, R41K, L63S, H69K, L89M  
PHPT4801 PHPT4801PR-RT None    I13V, I15V, K20KR, E35D, M36I, R41K, R57K, H69K, L89M  

Database

Resources

Team