Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Karlsson (2012)
Title Low prevalence of transmitted drug resistance in patients newly diagnosed with HIV-1 infection in Sweden 2003-2010.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 208
NumPts 208
Subtype B, CRF01_AE, C, A, CRF02_AG, D, G, F, CRF35_AD, CRF05_DF, B + F


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Page 1   listing Isolate 1 to Isolate 100 from Total 208 Clinical PR Isolates

SE_10 SE_10 None    T12N, L19I, E35D, N37S, I64V, I93IL  
SE_100 SE_100 None    I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K  
SE_101 SE_101 None    G16E, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
SE_102 SE_102 None    T12A, N37S, L38LI, R41K, I62V, L63LP, V77VI, I93L  
SE_103 SE_103 None    T12S, I15V, L19I, K20R, M36I, N37S, R41K, H69K, V77I, L89M, I93L  
SE_104 SE_104 None    T12P, G17E, L19I, M36I, L63P, I93L  
SE_105 SE_105 None    I13V, M36I, R41K, H69K, L89M  
SE_107 SE_107 None    I13V, K20KR, L33V, R41K, I64V, I72IV  
SE_109 SE_109 None    I15V, G16E, M36I, R41K, Q61K, H69K, L89M, I93L  
SE_11 SE_11 None    R41K, I62V, L63P, I66IL, I93L  
SE_110 SE_110 None    I13V, E35D, M36I, R41K, I62IV, L63PS, H69K, T74TS, L89M  
SE_111 SE_111 None    K14R, E35D, M36I, R41K, L63A, H69K, L89M  
SE_114 SE_114 None    E35D, N37E, L63P  
SE_115 SE_115 None    I13V, K20I, E35K, M36I, N37E, R41K, H69K, L89M  
SE_116 SE_116 None    L19I, M36I, R41K, L63T, H69K, L89M, I93L  
SE_118 SE_118 None    T12P, K14KR, L19I, Q61QE, I62V, L63PS, C67H, I72IV, V77I, I93L  
SE_119 SE_119 None    K14R, I15V, N37D, L63P, I93L  
SE_12 SE_12 None    I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K  
SE_121 SE_121 None    R57K, I62V, L63P, I93L  
SE_122 SE_122 None    L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69Q, V77I, L89M  
SE_123 SE_123 None    G16E, K20R, E35D, M36I, R41K, R57K, H69K, I72IV, L89M, Q92K  
SE_124 SE_124 None    I13V, G16A, E35D, M36I, R41K, H69K, K70KR, L89M  
SE_125 SE_125 None    I13V, K14R, K20I, E35G, M36I, P39S, R41K, H69K, T74S, V82I, L89M, I93L  
SE_126 SE_126 None    I13V, M36I, K43R, R57K, I62V, L63P, I64M, A71V, I93L  
SE_128 SE_128 None    L10I, R41K, I93L  
SE_129 SE_129 None    K14R, I15V, G16E, E35D, R41K, I93L  
SE_13 SE_13 None    K14R, I64V  
SE_130 SE_130 None   L10LF V11VF, K14R, L19Q, N37H, D60E, I62V, L63I, I64V  
SE_132 SE_132 None    I13V, K14KR, I15V, E35D, M36I, R41K, H69K, L89M  
SE_133 SE_133 None    I15V, G16E, K20R, M36I, N37K, P39S, R41N, H69K, L89M, I93L  
SE_135 SE_135 None    T4N, I13V, K14R, L19P, K20I, E35D, M36I, R41K, H69K, L89M  
SE_136 SE_136 None    I13V, G16E, K20I, M36I, R41K, K43KR, I64L, H69K, K70R, L89M  
SE_137 SE_137 None    R41K, I62V, I93L  
SE_138 SE_138 None    T12A, M36I, R57K, I62V, L63P, I93L  
SE_14 SE_14 None    N37S, L63AS, I72T, V77I  
SE_140 SE_140 None    I13V, G16E, E35D, M36I, R41K, R57K, L63H, E65EK, H69K, L89M R87RQ, T96TI 
SE_143 SE_143 None    N37CS, I64V, I72T, V77I  
SE_15 SE_15 None    L10I, I13V, I15V, G16E, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M  
SE_16 SE_16 None    L33V, N37S, P39S, R41K, K45R, D60E, L63P, I64V  
SE_17 SE_17 None    I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K  
SE_19 SE_19 None    T12S, I15V, G16GE, L19LI, M36I, R41K, L63S, H69K, L89M, I93L  
SE_21 SE_21 None    T12TK, G16E, E35D, M36I, N37D, R57K, I62V, L63T, E65D, I72T, T74TA, L89M  
SE_22 SE_22 None    I15IV, G16E, M36I, R41K, L63NS, H69K, I72T, I93L  
SE_25 SE_25 None    T12S, I15V, L19I, E35D, M36I, R41K, I62IV, L63V, H69K, T74S, L89M, I93IL  
SE_26 SE_26 None    T12S, M36I, R41K, K45R, L63P, H69K, L89M, I93L  
SE_28 SE_28 None    T12S, I15V, L19I, K20R, E35D, N37I, R41K, K45R, H69K, T74S, L89M, I93L L38C 
SE_29 SE_29 None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, L89M  
SE_30 SE_30 None    R57K, I62V, L63P, I93L  
SE_31 SE_31 None    L10V, I15V, G16E, M36I, R41K, L63V, H69K, L89M, I93L  
SE_32 SE_32 None    I13V, K20R, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
SE_34 SE_34 None    V11I, I13V, K14R, I15V, G16GE, K20R, E35D, M36I, R41K, R57K, L63T, H69K, L89M  
SE_35 SE_35 None    T12R, L19V, R41K, L63S, H69K, V77I, F99L  
SE_37 SE_37 None    I13V, K14R, K20I, E35Q, M36I, N37D, R41K, R57K, C67E, H69K, V82I, L89M  
SE_38 SE_38 None    I15V, G16E, M36I, R41K, H69K, L89M, I93L  
SE_40 SE_40 None    I15V, L63P  
SE_41 SE_41 None    R41K, I62V, L63S, I93L  
SE_42 SE_42 None    T12S, G16E, L19I, M36I, H69K, L89M, I93L  
SE_44 SE_44 None    T12P, L19I, L63A, I93L  
SE_45 SE_45 None    I13V, N37D, L63P, V77I, I93L  
SE_46 SE_46 None    I13V, L63P, I93L  
SE_48 SE_48 None    I13V, E35D, N37ND, L63P, I64V, K70R  
SE_49 SE_49 None    L10LI, M36I, N37S, Q61QH, I62IV, L63ST  
SE_5 SE_5 None    N37S, K45R, L63S, V77I, I93L  
SE_50 SE_50 None    L33V, E35D, N37Y, R41K, I62V, L63P, I64L, I93L  
SE_51 SE_51 None    I13V, K20R, E35D, M36I, R41RK, L63PS, H69K, K70R, V82VI, L89M, T91A, F99L  
SE_52 SE_52 None    I15V, E35D, M36I, I93L  
SE_53 SE_53 None    L10V, I13V, K14KR, I15V, E35D, M36I, N37D, R41K, H69K, K70KR, L89M  
SE_55 SE_55 None    I13V, N37C, I62V, L63P, I72M  
SE_56 SE_56 None    L10V, I13V, G16E, E35D, M36I, R41K, H69K, L89M, F99L  
SE_57 SE_57 None    L10IV, K14R, I15V, N37D, I93L  
SE_58 SE_58 None    I15V, G16E, E35D, R41K, I64V, I93L  
SE_59 SE_59 None    I13V, E35D, M36I, R41K, H69K, L89M  
SE_6 SE_6 None    I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K  
SE_60 SE_60 None    K14R, I15V, N37D, L63P, I93L  
SE_61 SE_61 None    E35D, N37D, R41K, L63P, A71T, I72T  
SE_62 SE_62 None    I13V, G16E, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M, Q92K  
SE_63 SE_63 None    R41K, I62V, L63P, I93L  
SE_65 SE_65 None    R57K, I62V, L63P, I93L  
SE_69 SE_69 None    T12S, K14R, I15V, L19I, K20R, M36I, R41K, L63P, H69K, K70R, V77I, L89M, I93L  
SE_72 SE_72 None    D60E, Q61E, I62IV, L63P, I72IV, V77I, I93L  
SE_74 SE_74 None    I13V, K14R, G17E, Q18QL, K20IV, M36I, N37D, H69K, K70R, L89M  
SE_77 SE_77 None    R41K, L63P  
SE_79 SE_79 None    I13IV, G16E, E35D, M36I, R41K, H69K, L89M, I93L  
SE_8 SE_8 None    I15V, N37D, L63P, I93L  
SE_82 SE_82 None   Q58E I13V, R41K, D60E, I62V, L63T, I64V, E65D, V77I, V82I  
SE_83 SE_83 None    T12S, I15V, L19I, K20R, M36I, N37S, R41K, H69K, V77I, L89M, I93L  
SE_84 SE_84 None    T12P, I13V, K14R, I15V, M36I, R41K, L63P, H69K, T74TS, L89M, I93L  
SE_86 SE_86 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
SE_87 SE_87 None    L10V, T12A, G16E, M36I, R57K, I62V, L63N, I64V  
SE_88 SE_88 None    I15V, M36I, P39PQ, R41K, L63LIV, I64IL, H69K, L89M, I93L  
SE_89 SE_89 None    I15IV, M36I, R41K, H69K, L89M, I93IL  
SE_9 SE_9 None    I13V, E35D, M36I, R41K, H69K, I72V, L89M  
SE_90 SE_90 None    I15V, E35D, M36I, K45R, R57K, L63T, I72V, I93L  
SE_91 SE_91 None    E35D, M36I, R41K, K45R, R57K, H69K, L89M  
SE_92 SE_92 None    E35D, N37S, R41K, I62V, L63P, I93L  
SE_93 SE_93 None    N37S, I62V, L63S, A71V, V77I, I93L  
SE_95 SE_95 None    T12S, I15IV, L19V, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
SE_96 SE_96 None    I15V, M36I, I62IV, L63LP  
SE_98 SE_98 None    N37NS, R41K, K43R, L63P, V77I, I93L  
SE_99 SE_99 None    I13V, E35D, N37T, R41K, L63LP, A71V, V77I, I93L