Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Thorat (2011)
Title Surveillance of transmitted HIV type 1 drug resistance among HIV yype 1-positive women attending an antenatal clinic in Kakinada, India.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 47
NumPts 47
Subtype C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
Pat002 IN-NARI-HIVDR-5-002 None None   V35T, T39N, S48T, K49R, V60I, K101R, D121Y, K122E, I135R, S162A, T165I, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, V292I, I293V, E297K  
Pat004 IN-NARI-HIVDR-5-004 None None   V35T, E36A, T39D, S48T, V60I, K101R, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, D324E  
Pat005 IN-NARI-HIVDR-5-005 None None   V35T, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173E, Q174K, D177E, I178L, T200A, Q207E, R211K, V245Q, A272P, K277R, V292I, I293V, V317A, D324E  
Pat006 IN-NARI-HIVDR-5-006 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, S162A, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V G213GR 
Pat007 IN-NARI-HIVDR-5-007 None None A62V  L34V, V35T, E36A, T39D, S48T, V60I, V90I, D121Y, K122E, I135IV, S162A, K173A, D177E, T200A, Q207G, V245QR, S251SN, A272P, K277R, E291D, V292I, I293V  
Pat008 IN-NARI-HIVDR-5-008 None None   V35T, E36A, T39D, S48T, K49R, V60I, D121Y, K122E, S162A, E169K, K173A, D177E, T200A, Q207K, R211K, V245Q, A272P, K277R, T286A, A288AT, E291D, V292I, I293V, V317A, I326V  
Pat009 IN-NARI-HIVDR-5-009 None None   V35T, T39N, E40ED, S48T, V60I, D121Y, K122E, D123G, I135R, S162A, K173A, Q174K, D177E, T200A, E204D, Q207D, R211K, V245Q, A272P, T286A, I293V, P294L, E297K, H315Q, V317A, I329L, Q334E  
Pat010 IN-NARI-HIVDR-5-010 None None   V35T, E36A, T39E, S48T, V60I, D86E, D121Y, K122E, I135R, S162A, K173T, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A  
Pat011 IN-NARI-HIVDR-5-011 None None   V35T, T39E, S48T, V60I, K101A, D121Y, K122E, I135R, S162C, E169Q, K173D, Q174K, G196K, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V  
Pat012 IN-NARI-HIVDR-5-012 None None   V35K, T39D, S48T, V60I, K102KQ, D121Y, K122E, I135T, S162A, K173T, D177E, T200E, Q207E, V245K, A272P, K277R, K281R, T286A, E291D, V292I, I293V, K311R  
Pat013 IN-NARI-HIVDR-5-013 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, T139M, S162A, K173A, D177DE, T200A, E204ED, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, S322A  
Pat014 IN-NARI-HIVDR-5-014 None None  K101E V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135R, S162A, K173T, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I329V  
Pat015 IN-NARI-HIVDR-5-015 None None   V35T, E36A, T39DN, S48T, V60I, D121H, K122E, I135T, S162H, T165I, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, K281R, E291D, V292I, I293V, P294T, K311R  
Pat016 IN-NARI-HIVDR-5-016 None None   V35T, E36A, T39D, S48T, V60I, K122KE, D123N, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, K281R, T286A, E291D, V292I, I293V, P294T, L303M, V317A  
Pat017 IN-NARI-HIVDR-5-017 None None   T27TS, V35R, E36A, T39D, S48T, V60I, K122E, I135T, S162C, K173T, D177DE, T200A, Q207E, V245Q, A272P, K277KR, K281R, T286AS, E291D, V292I, P294T  
Pat018 IN-NARI-HIVDR-5-018 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K173Q, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, P294Q, R307K  
Pat019 IN-NARI-HIVDR-5-019 None None   E29ED, V35T, E36A, T39E, S48T, V60I, K102KQ, K103KR, K104KQ, D121Y, K122E, I135T, S162C, K173A, Q174K, D177E, T200A, Q207G, R211Q, V245Q, A272P, V276I, K277KR, E291D, V292I, I293V, V317A, Q334E  
Pat020 IN-NARI-HIVDR-5-020 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, I142IT, S162X, K173A, D177E, T200E, Q207E, R211K, D237DN, V245Q, A272P, K277R, T286TA, E291D, V292I, I293V, E297EA, K311R  
Pat021 IN-NARI-HIVDR-5-021 None None   V35T, E36A, T39E, S48T, K49R, V60I, K102R, K104R, I135T, K173T, D177E, T200A, Q207E, V245Q, A272P, V276I, K281R, T286A, E291D, V292I, I293V, P294T  
Pat022 IN-NARI-HIVDR-5-022 None None   V35T, T39N, S48T, V60I, D121Y, K122E, I135R, S162A, K173T, Q174K, D177E, T200V, Q207E, R211K, V245Q, A272P, K277R, K281R, T286A, E291D, V292I, I293V, V317T, D324DE  
Pat023 IN-NARI-HIVDR-5-023 None None   V35T, E36A, T39D, K43KR, S48T, V60I, D121Y, K122E, I135T, S162A, K173A, D177E, T200A, Q207E, V245Q, D250E, A272P, K277R, E291D, V292I, I293V, P294T, I329L, Q334QE  
Pat024 IN-NARI-HIVDR-5-024 None None   K20R, V35T, T39N, V60I, K122E, I135K, K166R, K173A, D177E, T200A, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P294T, E297A, E312D  
Pat025 IN-NARI-HIVDR-5-025 None None  V179D V35T, E36A, T39D, S48T, V60I, D121H, K122E, I135M, K173I, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, A272P, K277R, K281R, E291D, V292I, I293V, V314A, D324E  
Pat026 IN-NARI-HIVDR-5-026 None None   V35T, E36A, T39D, S48T, V60I, K102KR, K104KR, D121DY, K122E, I135R, S162A, K173A, D177E, T200A, E204ED, Q207E, R211RK, V245Q, A272P, K277KR, T286TA, E291D, V292I, I293V, V317A, D324E  
Pat027 IN-NARI-HIVDR-5-027 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, E204D, Q207E, V245Q, D250E, A272P, T286A, E291D, V292I, I293V, P294Q  
Pat028 IN-NARI-HIVDR-5-028 None None   K11R, K13KR, V35T, E36A, T39E, S48T, V60I, D121Y, K122E, I135T, S162A, K173A, D177E, T200A, Q207D, V245H, A272P, K277R, T286A, E291D, V292I, I293V  
Pat029 IN-NARI-HIVDR-5-029 None None   V35MT, T39N, S48T, I50L, V60I, D121Y, K122E, I135R, S162A, K173V, D177E, T200A, E204K, Q207E, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, E297K, V317A  
Pat030 IN-NARI-HIVDR-5-030 None None   V35M, T39E, S48T, V60I, D121Y, K122E, I135T, K166KR, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, L283I, A288S, E291D, V292I, I293V, P294T, V314I  
Pat031 IN-NARI-HIVDR-5-031 None None   V35T, T39N, S48T, V60I, K104N, D121Y, K122E, I135V, S162A, K166R, K173A, D177E, T200A, Q207A, D237N, V245H, A272P, K277KR, E291D, V292I, I293V, V317A  
Pat032 IN-NARI-HIVDR-5-032 None None  A98AG K32E, V35T, E36A, T39D, V60I, K101R, D121Y, K122E, I135R, K166KR, K173A, D177E, T200A, Q207K, R211K, F214L, V245Q, A272P, K277R, K281R, T286A, E291D, V292VI, I293V  
Pat033 IN-NARI-HIVDR-5-033 None None   V35T, E36A, T39E, S48T, V60I, D123E, I135T, I142V, S162C, K166R, D177E, T200A, Q207E, V245Q, A272P, K277R, T286TA, E291D, V292I, I293V  
Pat034 IN-NARI-HIVDR-5-034 None None   V35K, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, D177E, G196K, T200A, Q207G, R211K, V245K, A272P, K277R, T286A, E291D, V292I, I293V, V317A  
Pat035 IN-NARI-HIVDR-5-035 None None  A98G K20R, V35T, T39D, V60I, V111I, D121HY, K122E, I135R, S162A, K173A, T200A, Q207A, R211K, F214L, V245Q, A272P, V276T, K277R, E291D, V292I, I293V, L310I I159IT 
Pat036 IN-NARI-HIVDR-5-036 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V, P294T  
Pat037 IN-NARI-HIVDR-5-037 None None   V35K, T39D, S48T, V60I, D121Y, K122E, I135T, S162A, K173T, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, E297A, V317A, D324E  
Pat038 IN-NARI-HIVDR-5-038 None None   V35T, E36A, T39E, S48T, V60I, I135V, K173T, D177E, T200E, Q207E, R211K, F214L, V245Q, E248Q, A272P, K277R, E291D, V292I, I293V, P294A  
Pat040 IN-NARI-HIVDR-5-040 None None   V35T, E36A, T39E, S48T, V60I, K102R, K104R, I135R, K173T, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, E291D, V292I, I293V, E297T, K311R  
Pat041 IN-NARI-HIVDR-5-041 None None   V35T, E36A, T39D, S48T, V60I, I135T, S162A, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V  
Pat042 IN-NARI-HIVDR-5-042 None None   V35T, E36EA, T39DN, S48T, V60I, W88C, D121Y, K122E, I135T, S162H, T165I, K166R, K173A, D177E, T200A, I202V, Q207E, R211K, F214L, V245Q, A272P, K275KQ, K277KR, T286A, E291D, V292I, I293V, E312A  
Pat043 IN-NARI-HIVDR-5-043 None None   V35T, E36A, T39E, K43KR, S48T, K49R, V60I, D121Y, K122E, I135T, T165I, K173A, D177E, T200A, Q207E, R211RK, F214L, V245Q, A272P, K277R, T286A, E291D, V292I, I293V V111VIM 
Pat044 IN-NARI-HIVDR-5-044 None None   V35T, E36A, T39D, K43R, S48T, V60I, D121Y, K122E, I135R, T139TM, I142V, S162C, T165TI, K173A, D177E, V179I, T200E, E204K, V245Q, A272P, K277KR, K281R, T286A, E291D, V292VI, V317A  
Pat046 IN-NARI-HIVDR-5-046 None None   V35T, T39N, S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, Q207E, R211K, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, P294T, V317A, S322A  
Pat047 IN-NARI-HIVDR-5-047 None None   V35T, E36A, T39E, S48T, V60I, K122E, D123S, K166R, K173T, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V, E297A  
Pat048 IN-NARI-HIVDR-5-048 None None   K20KR, V35T, E36A, T39D, K43R, S48T, V60I, D121Y, K122E, I135T, S162Y, T165I, K166KR, K173T, D177E, V189I, T200A, Q207D, R211K, F214L, V245Q, A272P, K281R, T286A, E291D, I293V, P294S  
Pat049 IN-NARI-HIVDR-5-049 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, I135V, S162A, K166KR, K173A, D177E, T200A, Q207EG, R211K, V245Q, A272P, K277KR, K281R, T286A, E291D, V292I, P294T, K311R, D324E  
Pat050 IN-NARI-HIVDR-5-050 None None  E138EA V35T, E36A, T39D, S48T, V60I, I135V, K173T, Q207E, V245Q, A272P, I274V, E291D, V292I, I293V, P313S  
Pat051 IN-NARI-HIVDR-5-051 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122A, I135R, S162A, K173A, Q174K, D177E, T200E, Q207E, V245H, A272P, K277R, K281R, K287R, E291D, V292I, I293V, P294T  

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