Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kousiappa (2009)
Title Near full-length genetic analysis of HIV sequences derived from Cyprus: evidence of a highly polyphyletic and evolving infection.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 77
NumPts 77
Subtype B, A, C, CRF35_AD, CRF02_AG, D, CRF04_cpx, CRF45_cpx, CRF01_AE, G

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
CY018 CY018 Unknown  M46I, I54V, V82A, L90M L10F K20I, E35D, M36I, N37D, R57K, D60E, L63P, A71V, I93L  
CY020 CY020 Unknown    E35D, R57K, L63A, E65D, A71V, I93L  
CY021 CY021 Unknown    I13V, M36I, R41K, H69K, L89M  
CY022 CY022 Unknown    L10I, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M  
CY023 CY023 Unknown    L10I, I13V, K14R, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
CY028 CY028 Unknown  L90M  L10I, K20M, L33I, E34T, M36I, R41K, I62V, L63S, I64V  
CY029 CY029 Unknown    I13V, K14R, L19P, K20I, M36I, N37D, R41K, I64M, H69K, K70R, L89M  
CY030 CY030 Unknown    T12S, I13V, L19I, L33V, N37K, I62V, L63P, K70E  
CY031 CY031 Unknown    K14R, I64V  
CY032 CY032 Unknown    T12S, L19I, N37D, L63P, V77I, I93L  
CY033 CY033 Unknown    T12S, I15V, E35D, R57K, I62V, L63A, E65D, A71V, I93L  
CY035 CY035 Unknown   K43T K14R, I15V, L19Q, E35D, I62V, L63S, I64L, A71V, I93L  
CY036 CY036 Unknown    E35D, R57K, I62V, L63A, E65D, A71V, I93L  
CY037 CY037 Unknown    T12V, E35D, M36I, N37D, L63P Y59N 
CY038 CY038 Unknown    T12V, E35D, M36I, L63P  
CY040 CY040 Unknown  M46I, V82F  T12S, I15V, L19I, E35D, M36I, R41N, H69K, L89M, Q92H, I93L  
CY048 CY048 Unknown    I13V, K14R, G17E, K20I, M36I, R41K, H69K, K70R, L89M  
CY051 CY051 Unknown    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
CY055 CY055 Unknown    K14R, N37H, R41K, L63S, I64V, E65D, K70R, V77I  
CY056 CY056 Unknown    K14R, R57K, I62V, L63P, I93L  
CY057 CY057 Unknown    I13V, E35D, M36I, R41K, H69K, I72L, L89M, I93L  
CY058 CY058 Unknown    Q2P, I13V, E35D, M36I, R41K, R57G, H69K, L89M, I93L V75E 
CY063 CY063 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, C67E, H69K, V82I, L89M  
CY064 CY064 Unknown    I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, I72V, L89M  
CY065 CY065 Unknown    R8P, T12N, E35D, M36I, N37D, R57K, L63P  
CY067 CY067 Unknown    I62V, L63N, T74S  
CY068 CY068 Unknown    I13V, L63P  
CY069 CY069 Unknown    T12S, L19I, E35D, M36I, R41K, K45R, D60E, L63S, H69K, L89M, I93L  
CY070 CY070 Unknown    E35D, R57K, L63P, I93L  
CY072 CY072 Unknown    T12P, E35D, M36I, R57K, I62V, L63A, E65D, A71V, I93L  
CY074 CY074 Unknown    E35D, N37S, R41K, L63P  
CY075 CY075 Unknown    K14R, N37H, R41K, I64V, V77I  
CY077 CY077 Unknown  V82A  R57K, I62V, L63A, E65D, A71V, V77I, I93L  
CY081 CY081 Unknown    I15L, L19I, K20R, M36I, R41K, L63P, H69K, L89M  
CY082 CY082 Unknown    E35D, R57K, I62V, L63A, E65D, A71V, I93L  
CY087 CY087 Unknown    T12A, I15V, G16E, E35D, N37S, R41K, L63T  
CY088 CY088 Unknown    E35D, N37D, R57K, I62V, L63A, E65D, A71V, I93L  
CY089 CY089 Unknown    E35D, N37D, R57K, I62V, L63A, E65D, A71V, I93L  
CY090 CY090 Unknown    I15V, G16E, K20R, E34K, E35N, M36I, P39S, R41K, D60E, Q61K, C67E, H69K, G78R, L89M  
CY092 CY092 Unknown    Q2P, T12A, K14R, R41K, D60E, L63P K55I, R87G 
CY093 CY093 Unknown    E35D, R57K, L63P, I64L, A71V, I72T, I93L  
CY096 CY096 Unknown   K43T I13V, I15V, E35D, I62V, L63S, I64M, A71V, I93L  
CY097 CY097 Unknown    E35D, N37D, R57K, I62V, L63A, E65D, A71V, I93L  
CY100 CY100 Unknown    L33V  
CY106 CY106 Unknown    I13V, K14E, G16E, K20R, E35D, M36I, K45R, R57K, L63S, H69K, L89M V32E 
CY107 CY107 Unknown    L19I, N37C, L63A, E65D  
CY110 CY110 Unknown    T12P, I15V, E35D, N37S, R41K, I62V, L63R, K70E, A71T, I93L  
CY111 CY111 Unknown    L10I, T12P, I13V, G16E, L19V, K20R, E35D, M36I, R41K, L63V, H69Q, L89M  
CY112 CY112 Unknown    L10I, I13V, K14N, G16E, L19V, K20R, E35D, M36I, R41K, L63V, H69Q, L89M  
CY113 CY113 Unknown    I13V, I64V  
CY120 CY120 Unknown    T12N, L63P, V77I, I93L  
CY121 CY121 Unknown    I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70R, L89M  
CY122 CY122 Unknown    E35D, L63P  
CY124 CY124 Unknown    K14R  
CY130 CY130 Unknown    T12S, L19I, N37C, R57K, D60E, L63S, I64V  
CY131 CY131 Unknown    I15V, L19I, K20M, E35D, M36I, R57K, L63P, H69Q  
CY132 CY132 Unknown    N37D, R57K, D60E, L63P, V77I, I93L  
CY137 CY137 Unknown    L63P, V77I, I93L  
CY140 CY140 Unknown    R8*, L10I, V11L, I13V, E35D, M36I, R41K, K45R, R57K, L63T, H69K, L89M  
CY141 CY141 Unknown    T12P, L19I, N37C, R57K, D60E, L63S, I64V  
CY142 CY142 Unknown    N37S, R57K, I62V, L63T, G68E, A71V, I72T, V77I, I93L  
CY149 CY149 Unknown    N37S, L63A, I93L  
CY150 CY150 Unknown    L19Q, L63P  
CY153 CY153 Unknown    I13V, K14E, I15V, K20R, E35D, M36I, K45R, R57K, L63P, H69K, L89M  
CY154 CY154 Unknown    L10V, I13V, I15V, D29N, M36I, R41K, L63I, H69K, L89M  
CY158 CY158 Unknown    I13V, G17E, K20I, E35N, M36I, R41K, I64M, H69K, V77I, L89M  
CY163 CY163 Unknown    T12S, I15V, E35D, M36I, R41K, L89M  
CY164 CY164 Unknown    I13V, E35D, M36I, R41K, K45R, R57K, H69K, K70R, L89M  
CY165 CY165 Unknown  M46I, I47V, L76V, I84V  L10I, I13V, K20I, E35D, M36I, K55R, R57K, I62V, L63P, I64V, A71V, I93L  
CY166 CY166 Unknown    T12S, I15V, L19I, M36L, N37A, L63P, H69K, L89M, I93L  
CY168 CY168 Unknown    L63P, I64L  
CY171 CY171 Unknown    K14R, E35D, M36I, N37D, R41K, H69K, L89M  
CY173 CY173 Unknown    I13V, K14R, G16E, E35D, M36I, R41K, H69K, V77I, L89M, I93L  
CY176 CY176 Unknown    T12S, I15V, L19I, M36I, N37D, L63H, H69K, L89M, I93L  
CY178 CY178 Unknown    I3V, Q7R, I13L, K14R, G16E, E35D, M36I, R41K, H69K, V77I, L89M, I93L V32G, V75E 
CY179 CY179 Unknown    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
CY180 CY180 Unknown    T12S, L19I, N37C, R57K, D60E, I62V, L63S, I64V  

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