Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Baker (2007)
Title HIV subtypes distribution and implication for antiretroviral treatment in a Ugandan population.
Citation J Int Assoc Physicians AIDS Care (Chic)
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 74
NumPts 74
Subtype A, D, B, CRF35_AD, CRF45_cpx, C

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
0079BS 04-0079BS None    I13V, M36I, R41K, I64V  
0351NG 04-0351NG None    M36I, R41K, I62V, L63S, I64M  
0535KH 04-0535KH None    T12A, K20R, E35D, M36I, R41K, H69K, L89M  
0567NR 04-0567NR None    Q2E, L10I, I13V, G16E, E35D, M36I, R41K, I62V, H69K, L89M  
0631KS 04-0631KS None    I13V, R41K, I64V  
1056KP 01-1056KP None    I13V, L33I, I64V  
1354KP 02-1354KP None    L10I, I13V, K20I, E35N, M36I, R41K, H69Q, L89M  
1378MJ 01-1378MJ None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
300NG 01-300NG None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, T74S, L89M  
6148NJ 03-6148NJ None    T12S, I15V, G16GE, L19LI, E35D, M36I, L63V, H69K, L89M, I93L  
6580SP 03-6580SP None    K14R, M36I, R41K, L63P, I64V  
7289KB 03-7289KB None    I13V, R41K, L63LP, I64V, H69Y, I72V  
800KN 03-800KN None    L10V, I13V, K14R, G16A, E35D, M36I, R41K, R57K, H69K, L89M  
9073NR 03-9073NR None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
9146NM 03-9146NM None  M46L L24F V11A, I13V, K14R, K20Q, E35D, M36I, N37ND, R41T, R57K, I62V, L63P, H69K, V77I, L89M Q7L 
9167NS 03-9167NS None    I13V, E35D, M36I, R41K, R57K, D60E, L63P, H69K, L89M  
9240KR 03-9240KR None    K14KR, G16E, K20R, M36I, R41K, R57K, H69K  
9366WG 03-9366WG None    I13V, E35D, M36I, R41K, H69K, L89M  
9410NS 03-9410NS None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
9412NS 03-9412NS None    T12A, I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
9454KI 03-9454KI None    L10V, I13V, M36I, R41K, I64V, E65D  
9456KM 03-9456KM None    L10I, I13V, G16E, E35D, M36I, R41K, K45R, R57K, H69K, K70R, L89M  
9538NG 03-9538NG None    I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, I72V, L89M  
9593OA 02-9593OA None    I15V, M36I, R41K, L63P L19A 
9997NM 999-7NM None    I13L, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
A1013 MBA1013-090805 None    Q2H, R41K, L63H  
A1014 MBA1014-090805 None    T12Q, I13V, M36I, R41K, I62V, L63S, I64V  
A1019 MBA1019-170805 None    L10LV, T12I, G16E, E35D, M36I, R41K, R57K, H69K, L89M  
A1021 MBA1021-170805 None    L10V, I13V, E35D, M36I, R41K, R57K, H69K, L89M  
A1023 MBA1023-180805 None    I13V, G16E, K20R, E35D, M36I, R41K, I62IV, L63CR, H69K, L89M  
A1025 MBA1025-180805 None    L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, L63S, H69K, L89M  
A1028 MBA1028-230805 None    I13V, I15V, K20R, E35D, M36I, P39T, R41K, I62V, H69K, L89M  
A1030 MBA1030-240805 None    T12A, I13V, I15V, R41K, D60E, L63LR, I64V, V77I  
A1031 MBA1031-240805 None    I13V, N37AT, R41K, Q61N, L63S, I64V, E65D, H69Y, V77I  
A1037 MBA1037-060905 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
A1039 MBA1039-190905 None    L10I, I13V, L19I, R41K, I64V, A71T, I72V  
A1040 MBA1040-190905 None    I13V, K20R, M36I, P39T, R41K, L63P, A71V, I93L  
A1043 MBA1043-200905 None    I13V, K20R, M36I, R41K, I47IM, I64V, E65ED, I72IV  
A1044 MBA1044-200905 None    I13V, K20R, M36I, R41K, I64V, E65D  
A1050 MBA1050-171005 None    I13V, I15V, M36I, R41K, I64V  
A1051 MBA1051-201005 None    I13V, R41K, I62V, L63A, H69Y  
A1053 MBA1053-201005 None    I13V, K14R, L19I, E35D, M36I, R41K, I62V, L63P, I64M, H69K, L89M  
A1055 MBA1055-261005 None    I13V, R41K, L63P, I64V, H69Y, I72E, V77I  
A1059 MBA1059-081105 None    I13V, L33V, M36I, N37T, P39S, R41K, L63Q, I64V, I72V, V82VI  
AR005 MBAR005-120405 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
AR006 MBAR006-120405 None    I13V, R41K, D60E, L63P, I64V  
AR007 MBAR007-120405 None    I13V, K14R, I15V, K20I, E35ED, M36I, R41K, L63P, H69K, L89M  
AR012 MBAR012-140405 None    I13V, L33V, R41K, L63A  
AR016 MBAR016-020505 None    I13V, K20I, E35D, M36I, R41K, R57K, D60E, C67A, H69K, L89M  
AR017 MBAR017-030505 None    L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
AR019 MBAR019-260505 None    I13V, K20I, M36I, H69K, L89M  
P0006 P0006-120105 None    I15V, M36I, R41K, I64V  
P0018 P0018-240105 None    I13V, K14R, I15V, E35D, M36L, N37D, R41K, L63T, H69K, V77I, L89M  
P0034 P0034-090205 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
P0043 P0043-160205 None    E35D, M36I, R41K, I64V, I72V  
P0048 P0048-230205 None    I13V, R41K, I64V, I72V, V77I  
P0054 P0054-020305 None    L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69Q, L89M  
P0060 P0060-070305 None    I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, L89M  
P0062 P0062-070305 None    I13V, M36I, R41K, L63P, I64IV  
P0079 P0079-160305 None    L10V, I13V, K14R, I15V, G16E, E35D, M36I, R41K, R57K, L63I, H69K, L89M  
P0086 P0086-230305 None    I13V, M36I, R41K, I62V, L63S, I64V, H69Y, N98K  
P0110 P0110-120405 None    I13V, E35D, M36I, R41K, R57K, D60E, L63AT, H69K, L89M  
P0166 P0166-250505 None    I13V, G16A, E35D, M36I, R41K, R57K, H69K, L89M  
P0169 P0169-300505 None    T12K, I15V, L19Q, K20R, M36I, R41K, L63S, V77I  
P0185 P0185-130605 None    L10M, I13V, E35D, M36I, R41K, R57K, L63P, H69Q, L89M  
P0218 P0218-130705 None    I13V, K20I, E35D, M36I, R41K, H69K, L89M  
P0219 P0219-130705 None    L19I, R41K, L63Q, I72V  
P0247 P0247-080805 None    I13V, N37S, R41K, I64V, V77I  
P0285 P0285-070905 None    I13V, K20R, M36I, R41K, L63Q, I64V  
P0289 P0289-140905 None    L10V, I13V, E35D, M36I, R41K, H69K, L89M G94C 
TC0251 TC025104 None    T12A, I13V, K20I, E35D, M36I, R41K, Q61N, I64M, H69K, L89M  
TC0255 TC025504 None    I13V, G16E, E35D, M36I, R41K, H69K, L89M  
TC0257 TC025704 None    T12S, I13V, K14R, I15IV, M36I, R41K, L63P, I72V  
TC0262 TC026204 None    I13V, G16E, K20R, M36I, P39S, R41K, H69K, L89M  

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