Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Ragonnet-Cronin (2010)
Title Longitudinal phylogenetic surveillance identifies distinct patterns of cluster dynamics.
Citation JAIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 875
NumPts 875
Subtype B, D, C


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Page 1   listing Isolate 1 to Isolate 100 from Total 875 Clinical PR Isolates

PHAC_001 PHAC_001 None    T12TA, E35D, N37D, R57RK, L63P, I64L  
PHAC_002 PHAC_002 None    M36MI, N37S, R41K, I62V, I93L  
PHAC_003 PHAC_003 None    L63P, I72E, V77I, I93L  
PHAC_004 PHAC_004 None   Q58QE N37Q, R57RK, L63C, V77VI  
PHAC_005 PHAC_005 None    I15V, L63C, I93L  
PHAC_006 PHAC_006 None    L63T, I72T, T74A, V77I, R87RK, I93L  
PHAC_007 PHAC_007 None    E35D, N37D, D60DE, L63P, I64L  
PHAC_008 PHAC_008 None    E35D, N37D, R57K, I62V, L63P, I64L, I93L  
PHAC_009 PHAC_009 None    M36V, L63P, A71T, I72E, V77I, I93L  
PHAC_010 PHAC_010 None    E35D, N37D, L63C, A71T, V77I  
PHAC_011 PHAC_011 None    E35D  
PHAC_012 PHAC_012 None    E35D, N37D, R57K, L63A, C67S, A71V, I93L  
PHAC_013 PHAC_013 None    I15V, E35D, L63C  
PHAC_014 PHAC_014 None    L10I, R41K, K43R, I62V, L63T, I93L  
PHAC_015 PHAC_015 None    T12TS, I15V, I64V, I93L  
PHAC_016 PHAC_016 None    M36I, L63C, I93L  
PHAC_017 PHAC_017 None    I13V, R41K, D60E, L63S, I64V, V77I  
PHAC_018 PHAC_018 None    I15IV, R41K, I62V, I93L  
PHAC_019 PHAC_019 None    I13V, M36I, R57RK, I62V, L63P  
PHAC_020 PHAC_020 None    L63C, Q92K  
PHAC_021 PHAC_021 None    L10I, T12A, I15V, M36I, L63C, I93L  
PHAC_022 PHAC_022 None    N37Q, L63C, I64IV, E65D  
PHAC_023 PHAC_023 None    T12A, E35D, M36I, L63P, I93L  
PHAC_024 PHAC_024 None    G16E, E35D, N37T, I62V, L63S, I64V, E65D, I72V  
PHAC_025 PHAC_025 None    E35D, L63LP, I64IV  
PHAC_026 PHAC_026 None    E35D, N37D, L63P, I64L  
PHAC_027 PHAC_027 None    I13IV, K14KR, I15IL, L33LV, I62IV, I64V  
PHAC_028 PHAC_028 None    I15V, E35ED, M36MI, N37D, K45R, I62V, L63P, I93L  
PHAC_029 PHAC_029 None    R57K, L63AP, I64IL, A71V, I93L  
PHAC_030 PHAC_030 None    E35D, M36I, L63P, H69K, K70T  
PHAC_031 PHAC_031 None    T12S, K14R, I15V, L19I, N37CS, D60E, I62V, L63P, K70E, V77I  
PHAC_032 PHAC_032 None    L10LI, M36I, I62IV, L63C, I93L  
PHAC_033 PHAC_033 None    E35D, N37D, L63P, I93L  
PHAC_034 PHAC_034 None    T12P, K14R, G16E, P39S, R57RK, L63H, I64V  
PHAC_035 PHAC_035 None    I15V, E35ED, M36I, P39PQ, I62V, L63P, I72V, I93IL  
PHAC_036 PHAC_036 None    T12A, I13V, M36I, R57K, L63P  
PHAC_037 PHAC_037 None    L10LV, I13IV, I15V, M36I, L63X, I64IL, E65ED, I72IV  
PHAC_038 PHAC_038 None    L63P, A71AT, I72E, V77I, I93L  
PHAC_039 PHAC_039 None    I15V, G16E, L63C, A71AT  
PHAC_040 PHAC_040 None    E35D, I62V, L63P, I93L  
PHAC_041 PHAC_041 None    T12P, K14R, N37CS, I62IV, L63S, I64IV, I72IT, V77I, V82VI  
PHAC_042 PHAC_042 None    T12TA, E35D, M36I, R41RK, I62V, L63C  
PHAC_043 PHAC_043 None    I15V, L63P, V77I, I93L  
PHAC_044 PHAC_044 None    I15V, E35D, M36I, N37D, L63C  
PHAC_045 PHAC_045 None    K14R, L19V, R41RK, L63P, H69Q, Q92K  
PHAC_046 PHAC_046 None    I13V, I15V, M36I, N37ND, I62IV, L63P, I93L  
PHAC_047 PHAC_047 None    I13IV, L19I, R57RK, I64V, V82VI  
PHAC_048 PHAC_048 None    L10I, M36I, L63T  
PHAC_049 PHAC_049 None    N37S, R41RK, I64V, I72V, V77I, I93L  
PHAC_050 PHAC_050 None    L63C, H69Y  
PHAC_051 PHAC_051 None    L10LV, T12TP, I13IV, E35D, N37S, I62IV, L63P, I72IT, V77VI, I93IL  
PHAC_052 PHAC_052 None    M36MI, R57K, L63P, I93L  
PHAC_053 PHAC_053 None    I13V, E35D, N37S, R41K, K45R, D60E, L63P, I64V, V77I  
PHAC_054 PHAC_054 None    I15IL, E35D, N37D, I62IV, L63S, I64L, A71V, V77VI, I93L  
PHAC_055 PHAC_055 None    L10LI, E35D, M36MI, N37D, R57RK, I62V, L63C, H69HY, A71T, I72V, V77I  
PHAC_056 PHAC_056 None    L10I, I15V, P39A, L63P, I93L  
PHAC_057 PHAC_057 None    K14R, R57K, L63P, I93L  
PHAC_058 PHAC_058 None    L63P, I64L, H69Q, V77I  
PHAC_059 PHAC_059 None    T12TS, I13IV, N37C, I62V, L63P, V77I, I93L  
PHAC_060 PHAC_060 None    N37S, R41K, I62V, V82I, I93L  
PHAC_061 PHAC_061 None    K14KR, I15IV, L19LIV, M36MIL, I62IV, L63C, I93IL  
PHAC_062 PHAC_062 None    L10V, I13V, M36V, R41K, D60E, L63P, I64V, V77I, I93L P1PA 
PHAC_063 PHAC_063 None    K14R, M36I, I62V, L63C  
PHAC_064 PHAC_064 None    I15V, N37I, K43R, R57K, L63P, I93L  
PHAC_065 PHAC_065 None    R41K, L63N, I64V, I72IT, I93L  
PHAC_066 PHAC_066 None    L10I, N37S, P39S, L63P, V77I, I93L  
PHAC_067 PHAC_067 None    I13V, E35D, N37S, R41K, I62V, L63P, A71T  
PHAC_068 PHAC_068 None    N37S  
PHAC_069 PHAC_069 None    T12TA, I13IV, I15V, K20KR, R41K, L63T, K70KT, V77I, V82VI  
PHAC_070 PHAC_070 None    E35D, M36I, I62V, L63P, V77I, I93L  
PHAC_071 PHAC_071 None    R41K, L63S, I64V  
PHAC_072 PHAC_072 None    E35D, N37T, I62V, L63P, V77I, I93L  
PHAC_073 PHAC_073 None    I15V, E35D, I62V, L63P  
PHAC_074 PHAC_074 None    I15V, E35D, N37E  
PHAC_075 PHAC_075 None    I15IL, M36T, N37E, I62V, L63PS, A71V, I93L  
PHAC_076 PHAC_076 None    E35D, N37D, L63P, I93L  
PHAC_077 PHAC_077 None    I13V, I15V, L63P  
PHAC_078 PHAC_078 None    E35D, M36I, R41K, I62V, L63T, A71V, I93L  
PHAC_079 PHAC_079 None    I15V, R41K, L63C, I93L  
PHAC_080 PHAC_080 None    I15V, L19I, N37S, L63H  
PHAC_081 PHAC_081 None    K14R, I15V, G16E, I62IV, L63C  
PHAC_082 PHAC_082 None    L10V, I15V, E35D, M36I, N37D, L63C, I72T  
PHAC_083 PHAC_083 None    I15IV, L19LQ, E35D, N37NS, R41K, L63P, V82I, I93L  
PHAC_084 PHAC_084 None    R41K, L63A, P79S  
PHAC_085 PHAC_085 None    T12TA, E35D, N37D, L63P, I93L  
PHAC_086 PHAC_086 None    N37A, P39S, L63P, V77I  
PHAC_087 PHAC_087 None    T12A, E35D, N37D, L63P, I93L  
PHAC_088 PHAC_088 None    I15V, L19I, E35ED, N37NS, I62IV, L63P, V77I  
PHAC_089 PHAC_089 None    I15V, L19I, K20R, N37S, R41K, L63P, I93L  
PHAC_090 PHAC_090 None    K14R, I15V, G16E, P39T, D60E, L63P  
PHAC_091 PHAC_091 None    I13V, N37NS, R41K, L63P, I64V, Q92K  
PHAC_092 PHAC_092 None    L10V, I15V, E35D, M36I, N37D, L63C, I72T  
PHAC_093 PHAC_093 None    K43KR, R57K, L63P, V77I, P79D  
PHAC_094 PHAC_094 None    L5LF, I13V, R41K, L63P, K70R, I72V, V82I, Q92K  
PHAC_095 PHAC_095 None    T4TS, L33V, P39Q, R41K, K45KR, D60E, L63P, I64IV Q7QP 
PHAC_096 PHAC_096 None    L19LI, P39PS, I64V  
PHAC_097 PHAC_097 None    L10LI, T12Q, I15V, N37T, G49GE, L63C, I72IV, I93L  
PHAC_098 PHAC_098 None    M36IT, N37E, P39PS, I62V, L63P, V82I, I93L  
PHAC_099 PHAC_099 None   L33LF M36MI, R41K, L63P  
PHAC_100 PHAC_100 None    R57RK, L63P, A71AT, V77I, I93L