Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Rhee (2010)
Title HIV-1 protease mutations and protease inhibitor cross resistance.
Citation AAC
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 778
NumPts 738
Subtype B, CRF01_AE, C, U, H, G


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Page 1   listing Isolate 1 to Isolate 100 from Total 778 Clinical PR Isolates

CA060014 CA63851 Unknown  M46I, I54L, V82AT, I84V, L90M K43T, G73T L10I, V11VI, I15V, K20R, E34EQ, E35ED, M36I, K55KR, D60E, I62IV, L63P, H69HR, A71V, I72V, I93L  
CA1144 CA60841 SQV, RTV, NFV, IDV 499 M46L, G48V, I54A, V82AT, L90M Q58E L10V, T12TK, L19I, F53Y, D60DE, Q61E, I62V, L63P, A71V, I72V, T74S, V77I, I93L  
CA1329 CA55163 IDV, NFV, SQV, RTV, Unknown 139 D30N, I84V, L90M L10F, L33F, K43T, N88D I15V, E35D, M36L, N37E, D60E, I62V, L63P, I93L  
CA1340 CA68608 PI, Unknown  M46I, I54V, I84V L10F, L24I, G73C I13V, K20I, M36I, D60E, L63P, I64V, I66V, A71T, I72T, T91S  
CA14151 CA38420 NFV 65 L90LM  M36I, I62V, L63LP, I64IV  
CA14383 CA63831 RTV, IDV, SQV, ATV 518 M46I, I54IV, I84V, L90M L23I, G73S L10LI, I13L, N37D, L63P, I66IV, C67CF, A71V, I72V, V77I, I93L  
CA1443 CA59286 IDV, SQV, NFV, APV, LPV, RTV, ATV 492 V32I, M46L, I54LV, V82A, I84V L24I, L33F L10I, I13V, I15IV, L19LV, K43E, D60E, L63P, A71V, I72V  
CA1456 CA59236 SQV, IDV, NFV, RTV, APV, TPV, LPV 461 V32I, M46I, I47V, I54L, I84V, L90M L33F, F53FL, G73T L10IV, E35D, M36MI, N37S, K55R, R57RK, L63P, I64V, I66V, A71IV, P79PA, I93IL  
CA1499 CA68660 IDV, NFV, SQV, RTV, APV, LPV 440 V32I, M46I, I47V, I54L, I84V, L90M L10F, L33F, Q58E, G73S, L89V V11I, I13IV, K20R, E35D, M36I, N37Q, R57K, D60E, I62V, L63P, A71V, V77T, I93L  
CA1601 CA68558 SQV, IDV, RTV, LPV, Unknown 263 M46I, I54V, I84V, L90M L10F, G73T I13M, K20I, M36I, N37D, I62V, L63P, I66IV, C67F, A71T, I72T, I93L  
CA16120 CA48241 SQV, RTV 94 I84V, L90M G73S L10I, K20R, E35D, M36I, N37D, R57K, L63P, A71V, I93L  
CA16430 CA39022 Unknown  M46MI  L33I, V77I, Q92R, I93L  
CA17599 CA64053 RTV, IDV, LPV, APV, Unknown 415 M46L, I54V, L76V, V82A L23I, F53L L10I, I15V, I62V, L63V, H69R, A71V, I72K, L89M, I93L  
CA1834 CA59294 RTV, NFV, IDV, APV, LPV, ATV 446 I54V, L76V, V82A L10F, L23I, L33F, Q58E I13V, R57K, D60E, L63P, A71V, I93L  
CA2204 CA50902 NFV, IDV, APV, RTV 209 M46MI, I54IL, I84IV, L90LM L10LF R41K, I62V, L63LP, V77VI, I93L  
CA2206 CA63847 SQV, IDV, NFV, LPV, APV, RTV, ATV 457 L90LM  Q18QE, L19IV, N37HQ, R41RK, I62IV, L63LP, I64V  
CA22152 CA51216 None  V82L  I15V, E35D, L63P, A71AV, I72IT, I93L  
CA25081 CA68752 PI, Unknown, LPV, RTV, TPV 66 M46I, I47V, I54M, I84V, L90M  L10I, L19I, K20R, E34D, E35D, M36I, R41K, L63P, A71T, I85V, I93L  
CA25675 CA59626 IDV, RTV, LPV 361 M46L, I54V, I84V, L90M L33F, G73S L10I, L63P, A71V, V77I, I93L  
CA26414 CA61287 Unknown    I13V, K14R  
CA27759 CA64169 Unknown, LPV 104 V32I, M46MIL, I47A, V82A, L90M L33F L10IT, I13V, M36I, R41RK, L63P, K70E, A71V, I93L  
CA30067 CA68808 Unknown  M46L, G48V, I54T, V82A, L90M L33F L10IV, I13IV, I15V, E34Q, M36L, N37D, R41RK, I62V, L63P, A71V, I72V, V75I, I93L T74D 
CA30173 CA69022 Unknown    T12A, K14KR, M36I, R57K, I62V, L63P, I93L  
CA3972 CA68568 IDV, SQV, NFV, RTV, APV, ATV, TPV 599 M46I, I54V, V82L, L90M Q58QE, T74P L10I, I13V, K20I, L33V, E35D, M36I, N37T, I62V, L63P, I64IV, A71V, I93L  
CA4066 CA42685 Unknown  I54IL  I13V, G16E, K20R, E35ED, M36I, N37NT, I62V, L63H  
CA4153 CA63845 RTV, NFV, IDV, LPV 519 M46MI, I84V, L90M  L10I, K20KR, E35D, M36I, R41K, L63P, H69Y, A71T, I72T, Q92K  
CA4307 CA59246 IDV, SQV, RTV, APV, LPV, TPV 451 V32I, M46I, I47V, I84V K20T, Q58E L10V, I13V, I15V, L19I, M36I, L63P, I64V, Q92K  
CA4323 CA59232 SQV, RTV, APV, IDV 387 V32I, I54L, I84V, L90M L10F, K20T, L33F, Q58E, L89V V11I, I13V, T31TA, E35D, M36I, R41K, D60E, I62V, L63P, A71V, V77I, P79H W42W* 
CA4360 CA63983 SQV, IDV, RTV, Unknown, LPV 255 M46I, I54V, I84V, L90M L10F, K20KT, G73T T4TA, I15IV, E35D, L63P, I64V, A71V, I72L, V77VI, I85V  
CA4501 CA68580 RTV, IDV, NFV, APV, Unknown 257 M46I, I54V, V82A, L90M  L10I, K20R, E35D, M36I, N37D, R41K, I62V, L63P, I93L, C95F  
CA4736 CA69140 IDV, PI, RTV, TPV, DRV 87 V32I, M46L, I54L, I84V, L90M K20T, L33F, G73S, L89V L10V, V11I, I13V, K14R, I15V, M36I, R41K, R57K, D60E, L63P, G68E, K70T, A71I, I72IM, I93L  
CA4900 CA57629 IDV, APV 340 I54M, V82A L10F L33V, R41K, Q61QH, L63P  
CA5321 CA63809 RTV, APV 424 I54IL, V82A, I84V, L90M L10F, K43T K20R, M36I, Q61E, I62V, L63P, A71V, I72K, Q92QK  
CA5471 CA57701 IDV, SQV, RTV, APV, LPV, Unknown 273 M46I, I54V, L76V, V82A L10F, L24I, L33F I13V, L19I, K55R, L63P, A71V, I93L, L97I  
CA5949 CA57703 SQV, RTV, APV 61 I84V, L90M  L10I, T31TA, I62IV, L63AV, A71V, I72V, V77I, I93L T26TA 
CA634 CA63963 SQV, IDV, RTV, Unknown, APV, LPV 355 M46I, G48V, I50V, I54S, V82A L33F, K43T L10I, K20R, E34T, E35D, M36I, N37D, I62V, L63P, A71IV, I72V, V77I, I85V, I93L  
CA6585 CA48123 IDV, SQV, RTV, NFV, APV, LPV 258 V32I, M46MI, I47V, I54M, V82A, L90M L33F, K43T, G73S, L89V L10V, T12D, I13V, I15V, K20M, E35ED, M36ML, D60E, Q61DN, I62V, L63P, C67Y, H69K, A71I, I72L, V77I  
CA7849 CA68594 IDV, APV, SQV, LPV 486 I47V, G48M, I54V, V82T, I84V K43T, F53L L10I, K20R, E35D, M36I, I62V, L63P, I66F, A71V, Q92R  
CA7916 CA55061 IDV, NFV 239 D30N N88D L10V, E35D, M36V, L63P, A71V, I93L  
CA8334 CA63821 SQV, RTV, APV, ATV 508 M46I, I50V, I54IL, L90M L10F, K43T, F53L, T74P I15V, K20I, M36I, D60E, I62V, L63P, A71V  
CA8386 CA63933 NFV 269 M46MI, L90M K20T T12S, I13V, I15V, L19I, M36I, R41RK, K55KR, R57RK, D60E, I62V, L63P, I64V, I93IL  
CA8437 CA63793 RTV, LPV 385 M46MI, I47V, I54V, V82F L33F, F53FL L10IV, M36L, P39Q, R41K, I62V, L63P, A71V, I93L  
CA90001 CA9000BT1 Unknown  M46I, I47V, I54V, I84V, L90M L10F, G73S I15V, K20I, M36I, I62V, L63P, A71V, I72T, I85V, I93L  
CA90003 CA9000BT3 Unknown    L10V, I13IV, L33V, E35D, L63P R87RG 
CA90004 CA9000BT4 Unknown  G48V, I54T, V82A M46V, G73GS L10I, I15V, K20R, E35D, M36I, R41K, L63P, A71V, I93L  
CA90005 CA9000BT5 Unknown  M46I, I54V, V82A L24I, L33F, K43T, N83D L10I, I13V, M36L, D60E, I62V, L63P, A71V, T74S, I93L  
CA90006 CA9000BT6 Unknown  M46L, I84V, L90M  L10I, V11I, I13IV, E35D, M36I, R41K, L63P, A71V, Q92K, I93L  
CA90007 CA9000BT7 Unknown  M46I, V82A, I84V, L90M L33F, F53L, G73S L10I, K20R, E34EA, E35D, M36I, N37E, I62V, L63P, A71I, I93L  
CA90008 CA9000BT8 Unknown  M46I, I47V, I54V, I84V, L90M G73T L10IV, I13IV, K20R, L33LIV, E34ED, E35D, M36I, N37ND, R41K, I62V, L63P, I64IV, I66IV, A71V, I72IV, I93L  
CA90009 CA9000BT9 Unknown  M46I, I54V, V82AT, L90M G73S L10V, V11I, T12K, I15V, E35D, M36I, N37D, R57K, I62V, L63P, A71V, I72L R87RG 
CA90010 CA900BT10 Unknown  I54V, V82A, I84V, L90M L33F, G73S L10IV, I13V, I15IV, K20R, E34D, E35D, M36I, K45R, R57K, I62V, L63P, I66V, A71V, I85L, I93L  
CA90011 CA900BT11 Unknown  M46I, I54V, V82T, I84V, L90M Q58E L10I, L19I, K20R, E35D, M36I, D60E, L63P, A71V, I72IT, I85V, Q92K, I93L  
CA90013 CA900BT13 Unknown  M46I, I84V L33F, N88D T4P, L10V, I13V, L19I, E35D, M36I, N37C, L63P, A71T, Q92R, I93L  
CA90014 CA900BT14 Unknown  V32I, I47IV, I54L, I84V, L90M L10F, L33F, Q58E, G73NS I13V, L19I, K20R, E35D, M36V, N37S, R41K, D60X, I62V, L63LP, I66F, A71V, I72L, P79PS, I93IV N98V 
CA90015 CA900BT15 Unknown  M46I, I54V, I84V, L90M L10F, K43T, N88D I15V, L19IT, K20M, E35G, M36I, N37E, P39Q, K55R, R57K, I62V, L63P, A71V, I72R, N83S, I85V, T91S  
CA90016 CA900BT16 Unknown  G48V, I54V, V82A K43T L10V, M36I, I62V, I64V, T74S  
CA90017 CA900BT17 Unknown  M46I, I84V, L90M G73C L10I, Q18R, K20I, I62V, L63P, I64IV, C67F, I72L, I93L  
CA90018 CA900BT18 Unknown  V32I, M46I, I54V, L76V, V82A, L90M F53L, Q58E L10I, I15V, G16A, K20R, M36I, K55R, L63P, A71V, I72V, I93L  
CA90020 CA900BT20 Unknown  G48GA, I54V, V82A L24I, L33F, G73C L10I, I13V, I15V, K20R, E35D, M36I, N37E, K45R, F53FI, R57K, I62V, L63P, G68E, A71T, I72T, I93L Y59YC 
CA90021 CA900BT21 Unknown  D30N, M46MI N88D T12E, I13V, N37NS, L63P, V77I, I93IL  
CA90022 CA900BT22 Unknown  I54L, L90M L33F, K43T L10I, I13V, E35D, L63P, I64L, V77I  
CA90023 CA900BT23 Unknown  M46L, I54V, V82AT, I84V K20T, L24LIM, L33F, Q58E L10I, V11VA, I13IV, I15IV, Q18QL, L19LI, E35NS, M36IL, N37D, R41RK, K55KR, R57K, D60E, Q61H, I62V, L63P, I64V, A71V, I72IV, T91S N83NY 
CA90024 CA900BT24 Unknown  V32I, M46I, I47V, I54M, V82T, L90M Q58E, T74TP L10LV, L33M, R41K, K55KR, L63P, K70T, A71V, L89F, I93L  
CA90025 CA900BT25 Unknown  D30N, M46I, I54L, I84V, L90M L10F, L33F, N88D I13V, K20R, M36I, N37D, R41K, L63P, I64L, I66V, A71T, I72T, I93L, C95F  
CA90026 CA900BT26 Unknown  M46I, I54L, V82A, L90M L24F, L33F, K43KT, G73A L10I, I13V, G16A, K20R, M36I, R41RK, K55R, I62V, L63P, I64M, A71I, I72L, I93L  
CA90027 CA900BT27 Unknown  M46I, I54V, V82A, I84V, L90M L10F, Q58E I15V, K20R, M36I, N37D, K55KR, R57RK, D60E, L63P, I64IL, A71V, I93L  
CA90028 CA900BT28 Unknown  I84V, L90M G73T, N83D L10I, K20R, E35DN, M36L, N37D, R41K, I62V, L63LP, I64V, I66V, A71V, I72IT, C95V  
CA90029 CA900BT29 Unknown  M46L, G48V, V82A, I84V  L10I, T12I, N37D, R57K, L63Q, I64V, A71V, I72T  
CA90030 CA900BT30 Unknown  L90M T74P L10I, E35D, M36I, R41K, I62V, L63P, A71V, I93L  
CA90032 CA900BT32 Unknown  V32I, M46I, I47V, I54V, V82A, L90M L33LF, F53L L10I, L19I, K20M, M36I, I62V, L63A, I64IM, A71V  
CA90033 CA900BT33 Unknown  V32I, V82A, L90M L10F, L33F I13V, K20R, M36I, L63P, A71V  
CA90034 CA900BT34 Unknown  M46I, I84V, L90M G73T L10I, I13IV, K20I, L63P, I64V, C67F, H69R, V77I, P79A  
CA90035 CA900BT35 Unknown  M46I, L90M  L10V, T12S, I13V, K14KR, K20I, M36I, R41K, I62V, L63P, A71T, I72IT, T74S, I93L  
CA90036 CA900BT36 Unknown  M46I, V82F, I84V L33F, F53L, Q58E, N83D L10V, G16A, K20R, E35DN, M36I, L63P, A71V, I93L  
CA90037 CA900BT37 Unknown  V32I, M46I, V82A, L90M L10F, L33F L63P, A71V, I72IV  
ENSW-1 ENSW-1 Unknown  V32I, M46MI, I47IV, I54L, V82A, L90M L10F, F53FL M36V, L63P, A71V  
KSC_pat1 KSC-1 Unknown  M46MI, I54IV, V82A, L90M F53L L10I, I13IV, L63P, A71V, T74S  
KSC_pat2 KSC-2 Unknown  M46MIL, V82A, I84V L10F K20KR, M36MI, L63P, A71V  
KSC_pat5 KSC-5 Unknown  V32I, M46I, I47IV, I54M, V82A L33F L10I, K20R, M36I, L63P, A71AV  
SR_Pat1 SR178746 Unknown  I54V, V82A, L90M L10FI, K43T, F53L, G73GS, L89LV T4TS, V11I, I13V, K20I, L33I, E35D, M36I, N37T, Q61H, I62V, L63P, A71I, T74S, N83S  
SR_Pat15 SR193596 Unknown    K14R, M36MI, R57K, I62V, L63P, I93L  
SR_Pat31 SR197701 Unknown    E21EK, N37NS, L63LI, I64V  
SR_Pat33 SR149695 PI  M46I, I54V, I84V, L90M L10F T4P, V11I, I13V, K20I, E35D, M36I, N37H, R41K, F53FY, D60DE, I62V, L63P, K70N, A71V, P79A, T91S, Q92K, N98I  
SR_Pat7 SR174394 Unknown    I15V, M36MI  
VS_12 VS_12 Unknown  V82A, I84V L24LI, L33F, F53L, Q58E L10I, V11LI, I13V, I15V, K20R, E35D, M36I, R41K, K55R, R57K, L63P  
VS_13 VS_13 Unknown  V32VI, I47IV, I54IVM, V82A, I84V L33F, K43T, F53L L10I, V11VIL, T12TI, I13V, I15V, K20RM, E35D, M36I, R57K, D60DE, L63P, A71V G48GW 
VS_15 VS_15b Unknown  V32I, I47V, I54LP, L90M L10F, K20T, G73S T12S, I13V, L33LI, E35D, M36I, L63P, I64IV, A71V  
VS_4 VS_4a Unknown  L90M G73GS L10I, I13V, E35D, M36I, I62IV, L63P, H69HY, A71T, I72T  
  VS_4b Unknown  L90LM L33LF, N83ND L10LVI, I13IV, E35ED, M36MI, I62IV, L63P, A71X, I72IT  
VS_5 VS_5a Unknown    L10I, E35D, P39Q, Q61E, L63P, I64IL, A71T, I93L H69HP 
VS_6 VS_6b Unknown  I54V, V82A, L90M F53FL, G73S L10V, I15V, K20I, R41K, I62V, L63P, A71V, I72IM, V77I  
WAEN_E WAEN_E Unknown  V32I, M46MI, I47IV, I54L, V82A, L90M L10F, F53FL L19E, E35D, M36V, N37D, R57K, L63P, A71V, I93L  
WAEN_F WAEN_F Unknown    I13IV, L19V, K20KM, E35D, M36MI, N37ST, R41K, K43KR, R57K, I62IV, L63S, I64V, E65D, V77VI  
WCS_1426 pat1426_2 Unknown    T12TS, I13IV, K14R, I15V, R41K, L63P, I72V  
WCS_2 WCS_2 Unknown    L33IV, M36MI, N37S, P39ST, R41K, L63AP, A71V, I93L  
WCS_pat1485 pat1485 Unknown    R41K, K43KR, I62V, L63P, I72IV, V77VI, I93L  
WCS_pat315 WCS_pat315 Unknown    L10LI, T12TA, I13V, M36MI, L63P, K70T  
WCS_pat728 WCS_pat728 Unknown    L33LV, E35D, N37D, K43KR, I62IV, L63P, I64V  
WCS_pat8 WCS_pat8 Unknown  M46I, I54IV, V82A L10LF I13V, K20R, M36I, N37D, R41K, I64V, V77I  
WCS_pat97 WCS_pat97 Unknown  V32I, M46MI, I47V K20KT, K43T L10V, T12A, I13V, K14R, L63P, V82I, I85V