Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Brumme (2009)
Title HLA-associated immune escape pathways in HIV-1 subtype B gag, pol and nef proteins.
Citation PLoS Med
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 976
NumPts 976
Subtype B, C, A, CRF01_AE, D, H, F


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Page 1   listing Isolate 1 to Isolate 100 from Total 976 Clinical IN Isolates

INT_3448 INT_3448 None    R20RK, V31I, I73IV, I113V, T124A, T125TA, V201I, T218TS  
INT_3449 INT_3449 None    E11D, S24N, V31VI, V32I, L101I, T112A, S119P, K136N  
INT_3450 INT_3450 None    D6DE, E10EA, E11D, S17SN, V37VI, I72V, K111A, T112A, S119P, T125A, V201VI, T206S, I208IL  
INT_3451 INT_3451 None    L101I, G193GE, I203M  
INT_3452 INT_3452 None    V31VI, I72V, T124A, A265V  
INT_3453 INT_3453 None    E10D, V31I, M50MI, I113V, T124N, T125A, T206S, A265AV  
INT_3454 INT_3454 None    D6E, K14R, S17C, S39SC, I72V, T124A, V201I  
INT_3455 INT_3455 None    E11D, S24N, V31I, L101I, K111T, T112A, S119P, T124TN, S283G  
INT_3456 INT_3456 None    K14R, A23V, S24G, L28I, L101I, R231K  
INT_3457 INT_3457 None    I72V, L101LF, V151I, K173R, K215KN, D256DE  
INT_3458 INT_3458 None    E10D, V31VI, I72V, S119P, T122I, T125A, S230N, R231K  
INT_3459 INT_3459 None    E11D, D25E, V31I, Q53K, L101I, K111Q, T112A, S119PT, T124N  
INT_3460 INT_3460 None    E11D, D25DE, V31I, K111T, S119P, T122I, V201VI, T218TS, D256DE T206PS 
INT_3461 INT_3461 None    D6E, K7R, E11D, V32I, V37I, I72V, S119P, T122I, T125A, V201I, T206S  
INT_3462 INT_3462 None    S24SG, L101I, S119G, T122I, T125A, G163GE, V201I, L234I, A265AV  
INT_3463 INT_3463 None    E11D, A21T, I72V, I89L, S119P, T122I, T124A, V201I, N222NH  
INT_3464 INT_3464 None    A23AV, L101I, V201I, A265V  
INT_3465 INT_3465 None    S39C, I72IV, I113IV, S119SG, T122TI, T124A, V201I, K211R, L234I, I251L, R284G  
INT_3466 INT_3466 None    E11ED, S24SN, V31VI, S39SN, L101I, K173KR, K219KN, N222NK  
INT_3467 INT_3467 None    E11D, R20RK, A23AV, K111T, V201I  
INT_3468 INT_3468 None    E10ED, I72V, L101I, K111T, I135IV, S230N, Q252K  
INT_3469 INT_3469 None    S17N, I72V, I113V, T124A, T206S, D256E  
INT_3470 INT_3470 None    K14R, R20K, V31I, D41DN, K71KR, I72V, L101I, K111T, T112A, I113V, S119P, I135V, M154MI, V201I, I208L, D256E  
INT_3471 INT_3471 None    L28I, I72IV, A91T, S119P, T122I, V165VI, T218S, R284RG  
INT_3472 INT_3472 None    M50I, T125A, K188R V176R 
INT_3473 INT_3473 None    V32I, I72IV, K156KN, V201I, D279DG  
INT_3474 INT_3474 None    E11D, L101I, K111T, S119P, T122I, T124TA, T125S, T218TS, D256E  
INT_3475 INT_3475 None    D6E, K14R, S17C, I72V, T112TI, T124A, V201I  
INT_3476 INT_3476 None    K7KR, I72V, S119ST, T124A, K156R, I204IV, T206S, I217IV, S230N, R284G  
INT_3477 INT_3477 None    S17SN, M50MI, K71KR, I72IV, I113IV, T124A, V201I, L234LI, A265V  
INT_3478 INT_3478 None    F185FY, K211Q, Q216QR, T218TI, K219KQ, L234I  
INT_3479 INT_3479 None    E11D, S24N, V31I, L101I, K111T, T112A, S119P, T122I, T124N, S283G  
INT_3480 INT_3480 None    E11D, S17C, I72V, L101I, S119P, T122I, T206S  
INT_3481 INT_3481 None    E11D, V32I, I72V, I84V, S119G, T122I, V201I, T206S  
INT_3482 INT_3482 None    S17N, V31VI, D41N, L45I, L101I, K160N, A265V  
INT_3483 INT_3483 None    K14KR, L28LIM, P30S, I72IV, T125A, K156N, E198D, V201I, T218S, N222K, S230N, M275MV  
INT_3484 INT_3484 None    K14KR, D25DE, S230N, D232DE, Q252QE, D256DE, A265V A86AV 
INT_3485 INT_3485 None    E11D, N27NS, L28I, K111T, S119P  
INT_3486 INT_3486 None    S24N, M50IT, I60IV, I72V, K103KR, V151I, A205S, K211R, E212A  
INT_3487 INT_3487 None    E10D, E11D, K14R, V31VI, L45Q, I72V, Q95PS, L101LI, T112TI, K136KQ, V201I, K219N, N222K, S230N  
INT_3488 INT_3488 None    D25E, S230N, A265AV  
INT_3489 INT_3489 None    I72IV, I113IV, T124A, T206S, K215N  
INT_3490 INT_3490 None    E11D, S24N, L45Q, A91E, L101I, T112A, S119R, T124N, T125A, I135V  
INT_3491 INT_3491 None    E11D, V31I, M50MT, V54VI, I72IV, L101LI, K111KQ, T124TA, K136KQ, V249VI, A265AV  
INT_3492 INT_3492 None    E11D, S24N, D25E, L28I, L45Q, L101I  
INT_3493 INT_3493 None    S17SN, V31VIM, I72V, L101LI, M154I, V201VI, T218TS  
INT_3494 INT_3494 None   E157Q S17N, M50I, I72IV, F121FS, K160Q, V201I, D256E, A265V, R269RK  
INT_3495 INT_3495 None    K14KR, R20RK, L101I, T124S, T125A, G193E, D256E  
INT_3496 INT_3496 None    E11D, S24N, G70GE, L101I, S119SGR, T122TI  
INT_3497 INT_3497 None    S17SN, L101I, K136N  
INT_3498 INT_3498 None    S17N, L45Q, G59E, I72V, L101I, T112I, T124A, D256E  
INT_3499 INT_3499 None    V31VI, E35EK, I72IV, L101LI, K136N, K173KR, F181L, T206S  
INT_3500 INT_3500 None    E11D, S24N, S39C, I72IV, L101I, T124TA, T125V, E157D, V201VI  
INT_3501 INT_3501 None    E11D, K14KR, L101I, K111T, V201I  
INT_3502 INT_3502 None    R20RK, S39SN, T124TA, A205AS, T206TS, K219N, N222K, S230SN  
INT_3503 INT_3503 None    K14KR, L28I, P30A, I60V, I113V, T124A, V126VIM, K215N, D256E  
INT_3504 INT_3504 None    K14R, L28I, V32I, S39SC, L101I, K111KQ, N222K  
INT_3505 INT_3505 None    E11D, S24N, T206S, D232E  
INT_3506 INT_3506 None    K14R, A21T, M50I, K71Q, K111R, S119R, T125A, K188KR, K211R  
INT_3507 INT_3507 None    L28I, P30PA, V32VI, I72V, L101I, K111AT, T112A, S119T, T218S  
INT_3508 INT_3508 None    D6DE, D25DE, P30PA, V31VI, V32VI, I72V, T112A, K188KR, I203IM, T206TS  
INT_3509 INT_3509 None    E11ED, R20K, L101I, K111T, T112A, S119T, T218S G4G* 
INT_3510 INT_3510 None    E11D, S17N, L28I, I72V, I84M, T124N, T125A, V126L, V151I  
INT_3511 INT_3511 None    E11D, V31I, M50I, L101I, K111T, T125TA, I135IV, A265AV  
INT_3512 INT_3512 None    T125V, S230N  
INT_3513 INT_3513 None    E11D, D25E, V31I, T124A, G193E, S230N, D279G  
INT_3514 INT_3514 None    S17N, I72IV, L101I, K111KR, T124A, K173KR, G193E, V201VI, L234I, D253DE, D256E  
INT_3515 INT_3515 None    E11D, R20K, L28I, I84V, L101I, T112V, T122TI, T124A, G193E, D232E, D253H, D256E  
INT_3516 INT_3516 None    E11D, R20RK, S24SG, S39C, L45IV, L101I, T112R, S119X, T122TI, T124A, K173KR, G193E, I203M  
INT_3517 INT_3517 None    S17N, T122I, T124N, T125A, S230N, A265V, S283G  
INT_3518 INT_3518 None    S17SN, A21AT, S39C, L101I, S119G, T122I, T124A, G189GR, D253E  
INT_3519 INT_3519 None    S17N, T112TI, T122TI, T124N, T125X, G163E, V201I, Y227F, D253Y, D256E, R284RG  
INT_3520 INT_3520 None    L45I, L101I, T124A, K160T, G193R  
INT_3521 INT_3521 None    D6E, S17N, K111KR, I113V, T124N, T125A, I204IV, A265V  
INT_3522 INT_3522 None    S17N, I72V, K111R, S119T, T124A, M154I, K188KR  
INT_3523 INT_3523 None   E157Q E11D, V31I, I72V, A91AT, L101I, S119ST, K156N, F181L, V201I, K211R, A265AV, I268IL, R269RK  
INT_3524 INT_3524 None    T124A, G193E, V201I, S230N, L234I, D279G  
INT_3525 INT_3525 None    K7KR, A23AV, M50MI, I72IV, T112TI, I113V, V201I, A265AV, S283SG  
INT_3526 INT_3526 None    E11D, V37I, I72V, L101I, S119X, T122I, T124A, K156N, S195C, T206S, S283SG  
INT_3527 INT_3527 None    E11D, S17C, I72V, V201VI, K215N, N222K, S230N  
INT_3528 INT_3528 None    K7KR, E11ED, K111T, S119P  
INT_3529 INT_3529 None    E11ED, R20RK, I72V, S119P, T122I, T125A, V201I, K211Q  
INT_3530 INT_3530 None    E10D, I72V, L101I, I135IV, V151I, K211KR, T218TS  
INT_3531 INT_3531 None    E10D, V31I, I72V, I113V, T124N, K211R, S230N, A265V  
INT_3532 INT_3532 None    E10D, V31I, I72V, I113V, T124N, K211R, S230N, A265V  
INT_3533 INT_3533 None    I72V, L74I, L101I, S119G, T122I, M154L  
INT_3534 INT_3534 None    S17N, L74V, L101I, G163E, H171Q, V201I, I208L, D256E  
INT_3535 INT_3535 None    K7R, V31I, V201VI, A265AV, S283G  
INT_3536 INT_3536 None    V31I, L68LS, I72V, V79VI, T124TA  
INT_3537 INT_3537 None    E11D, S24N, L45I, G70E, L101I, S119R, V201VI  
INT_3538 INT_3538 None    E11D, V31VI, M50I, A91T, L101I, S119R, S153SA, G163E, S195T, V201I, T206TS, I208IL, T210X, K211KR, E212X, N222NH, R231K  
INT_3539 INT_3539 None    E11D, L28I, K111R, S119SG, T122I, R231K  
INT_3540 INT_3540 None    S17N, T124N, K173R, V176L  
INT_3541 INT_3541 None    E11D, A21T, V31I, I72V, L74LI, G106GA, K111KNT, S119X, T122TI, T124TA, T125TA  
INT_3542 INT_3542 None    S17C, S119SR, T122TI, T124A, A265V  
INT_3543 INT_3543 None    E11D, S24SN, F26FY, L45X, I72IV, L101LI, K111KT, T112TA, S119ST, V150VA  
INT_3544 INT_3544 None    E11D, L101I, K111T, S119T, G193X  
INT_3545 INT_3545 None    E11D, L101I, T125A, E138ED, M154MI, I200L, V201I, K211Q, D232DE  
INT_3546 INT_3546 None    R20K, K111R, G193E, V201I, T218TS, I220IL, D256E  
INT_3547 INT_3547 None    E10ED, E11ED, L101I, K111KN, S119SG, T122I