Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Lindstrom (2006)
Title HIV-1 transmission cluster with M41L 'singleton' mutation and decreased transmission of resistance in newly diagnosed Swedish homosexual men.
Citation Antivir Ther
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 201
NumPts 201
Subtype B, A, CRF05_DF, C, CRF01_AE

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 201 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
SIIDC0101 SIIDC0101 None    E35D, N37D, L63P, V77I, I93L  
SIIDC0110 SIIDC0110 None    L63S  
SIIDC0111 SIIDC0111 None    L10I, I15V, R41K, L63FS, I93L  
SIIDC0112 SIIDC0112 None    I13V, L63X  
SIIDC0113 SIIDC0113 None    N37S, R41K, L63IT, I64IV, V77I, I93L  
SIIDC0114 SIIDC0114 None    E35D, M36I, I62IV, L63P, I93L  
SIIDC0115 SIIDC0115 None    L63P, I64V, I93V  
SIIDC0116 SIIDC0116 None    Q61QE, L63P, I93L  
SIIDC0117 SIIDC0117 None    L33LV, E35ED, N37CS, L63Q, I64V  
SIIDC0118 SIIDC0118 None    E35D, L63P, I93L  
SIIDC0200 SIIDC0200 None    I62V, L63LP, I64IM, C67CY  
SIIDC0201 SIIDC0201 None    I13V, I15V, E35D, N37S, L63P Q7QP 
SIIDC0202 SIIDC0202 None    E35D, P39Q, L63T, I64L, A71V, I72T, V77I, I93L  
SIIDC0203 SIIDC0203 None    K14R, I15V, R41K, K45R, I93L  
SIIDC0204 SIIDC0204 None    T12P, I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
SIIDC0205 SIIDC0205 None    E35D, N37T, R41K, I64V  
SIIDC0206 SIIDC0206 None    E35D, N37T, R41RK, I64V  
SIIDC0207 SIIDC0207 None    P39Q, L63P, H69HQ  
SIIDC0208 SIIDC0208 None    L19I, M36V, R41K, L63S, I64L, H69K, K70KR, L89M, I93L  
SIIDC0209 SIIDC0209 None    K14R, N37S, R41K, I62V, V77I, I93L  
SIIDC0210 SIIDC0210 None    I3V, I13V, E35D, R41K, I64V  
SIIDC0211 SIIDC0211 None    T12NS, L19V, R41K, I62IV, I64IV  
SIIDC0212 SIIDC0212 None    T12I, N37S, I62V, L63P, K70R, V77I, I93L  
SIIDC0213 SIIDC0213 None    N37S, D60E, Q61E, L63P, V77I, I93L  
SIIDC0214 SIIDC0214 None    I13V, K20R, M36I, N37D, I62V, L63FS, I64V, E65D  
SIIDC0215 SIIDC0215 None    T12I, N37S, R41RK, I62V, L63P, K70R, V77I, I93L  
SIIDC0216 SIIDC0216 None    I15V, N37S, L63S, I64IV, I72IV  
SIIDC0217 SIIDC0217 None    L19I, I62V, L63H, I72V, V77I, I93L  
SIIDC0218 SIIDC0218 None    E35D, N37D, R41RK  
SIIDC0219 SIIDC0219 None    N37S, R41K, I62IV, L63P  
SIIDC0220 SIIDC0220 None    I13V, K14R, I15IV, R41K, V77I, L89M  
SIIDC0221 SIIDC0221 None    E35D, L63P  
SIIDC0222 SIIDC0222 None    T12S, K14KR, R41RK, V77I  
SIIDC0223 SIIDC0223 None    K14R, R41K, C67S I64T, E65I, I66E 
SIIDC0224 SIIDC0224 None    R41K, K43KR, L63P, I93L  
SIIDC0225 SIIDC0225 None    T12TP, K14R, G16A, Q18QL, I62V, L63P, G68E, A71T, I72IV, V77I, I93L  
SIIDC0226 SIIDC0226 None    I15IV, N37ND, R57RK, L63LP, V77I, I93L  
SIIDC0227 SIIDC0227 None    E35D, L63P, V77I, I93L  
SIIDC0228 SIIDC0228 None    G16E, L19LI, E35D, N37Q, P39S, R57RK, L63P  
SIIDC0229 SIIDC0229 None    I15V, E35D, N37D, D60E  
SIIDC0230 SIIDC0230 None    T12P, I13V, I15V, R41K, L63P, H69HY, T91TA, I93L Q58P, T80TS, Q92Q* 
SIIDC0231 SIIDC0231 None    I13V, M36I, N37T, L63P, H69Q  
SIIDC0232 SIIDC0232 None    T12S, K14KR, I15V, I64IV, V77I, I93L  
SIIDC0233 SIIDC0233 None    K14R, I15V, I64V, V77I, I93L  
SIIDC0234 SIIDC0234 None    E35D, N37D, I62IV, A71T  
SIIDC0235 SIIDC0235 None    E35D, N37S, R41K, L63P  
SIIDC0236 SIIDC0236 None    I15V, Q61N, I93IL  
SIIDC0237 SIIDC0237 None    R41K, L63P, Q92QR  
SIIDC0238 SIIDC0238 None    I62V, L63P, V77I, I93L  
SIIDC0239 SIIDC0239 None    L10I, I13V, A22AT, M36I, N37T, L63P, H69HQ, K70R, A71AT, I72IV, Q92QK  
SIIDC0240 SIIDC0240 None    K14KR, N37S, L63P, I64V, C67Y, I72IV, V77I  
SIIDC0241 SIIDC0241 None    E35D, L63P, G68GE, I72IM  
SIIDC0242 SIIDC0242 None    R41K, L63P, Q92QR  
SIIDC0243 SIIDC0243 None    E35D, M36MI, N37NS, R41K, L63P, I64IV, I72IT  
SIIDC0244 SIIDC0244 None    I15V, E35D, N37S, R41K, L63P  
SIIDC0245 SIIDC0245 None    E35D, R57K, I62IV, L63P, I72V, V77I, I93L  
SIIDC0246 SIIDC0246 None    I15V, E35D, N37S, R41K, L63P  
SIIDC0247 SIIDC0247 None    K14R, N37D, L63P, E65D, V75I  
SIIDC0248 SIIDC0248 None    N37CS, R41RK, V77I, L89M, I93L  
SIIDC0249 SIIDC0249 None    T12E, K14R, K43KR, L63P, A71T, I72T, V77I, I93IL  
SIIDC0250 SIIDC0250 None    K14R, E35D, N37T, R41K, I64V  
SIIDC0251 SIIDC0251 None    I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, H69K, L89M  
SIIDC0252 SIIDC0252 None    E35D, N37S, R57K, L63P, V77I, I93L  
SIIDC0253 SIIDC0253 None    L10V, E35D, N37S, L63P  
SIIDC0254 SIIDC0254 None    R41K, L63P, Q92R  
SIIDC0255 SIIDC0255 None    K14R, N37D, L63P, E65D, K70R  
SIIDC0256 SIIDC0256 None    I13IV, I15V  
SIIDC0257 SIIDC0257 None    K14R, N37D, L63P, E65D, K70R  
SIIDC0258 SIIDC0258 None    I15V, L19Q, E35D, M36I  
SIIDC0259 SIIDC0259 None    L10V, E35D, N37S, R41K, L63P, I93L  
SIIDC0260 SIIDC0260 None    R41K, L63P, Q92R  
SIIDC0261 SIIDC0261 None    T12S, L19V, E35D, P39T, K43R, R57K, L63P, V82I, I93L  
SIIDC0262 SIIDC0262 None    K14R, I15V, M36I  
SIIDC0263 SIIDC0263 None    L63P, C67CY  
SIIDC0264 SIIDC0264 None    T12A, E35D, N37S, L63P, I93L  
SIIDC0265 SIIDC0265 None    L10I, I15IV, L63S, I64IM, I93L  
SIIDC0266 SIIDC0266 None    T12I, I13V, R41K, I62V, L63P, I93L  
SIIDC0267 SIIDC0267 None    I13V, M36I, L63P, L89LM  
SIIDC0268 SIIDC0268 None    E35D, M36I, N37D, I62V, L63P, A71V, V77I, I93L  
SIIDC0269 SIIDC0269 None    K14R, N37D, L63P, E65D, K70R  
SIIDC0270 SIIDC0270 None    I15V, L19Q, E35D, M36I, N37ND, R41EK  
SIIDC0271 SIIDC0271 None    N37S, I62IV, L63LP, I64V  
SIIDC0272 SIIDC0272 None    K14R, E35D, N37D, R41K, R57K, D60E, I64V  
SIIDC0273 SIIDC0273 None    T12A, L19I, P39T, L63P, I72V, V77I, I93L  
SIIDC0274 SIIDC0274 None    M36I, I62IV, L63PS  
SIIDC0275 SIIDC0275 None    N37S, R41K, R57K, L63P, I93L  
SIIDC0276 SIIDC0276 None    L33LV, E35D, N37S, R41K, L63P  
SIIDC0277 SIIDC0277 None    I15V, N37Q, L63V  
SIIDC0278 SIIDC0278 None    I15V, L19Q, E35D, M36I, F99FL  
SIIDC0279 SIIDC0279 None    I13V, L63S, I72V  
SIIDC0280 SIIDC0280 None    I13V, K14R, E35D, N37M, R41K, I64V  
SIIDC0281 SIIDC0281 None    I13IV, K14R, N37T, R41K, I64V  
SIIDC0282 SIIDC0282 None    I13IV, G17E, K20R, E35D, M36I, R41K, H69K, I72V, L89M, I93L  
SIIDC0283 SIIDC0283 None    I3V, G16E, R57K, L63H, I72IT  
SIIDC0284 SIIDC0284 None    R41K, L63P, V77I, I93L  
SIIDC0285 SIIDC0285 None    K14N, I15V, M36I, N37S, R41K, L63PS, I64IV  
SIIDC0286 SIIDC0286 None    L10I, I13IV, K14KR, I15IV, L63AV, I64V, I93L  
SIIDC0287 SIIDC0287 None    L10I, E35D, L63P, C67S, I93L  
SIIDC0288 SIIDC0288 None    I13V, E35D, M36I, R41K, L89M  
SIIDC0289 SIIDC0289 None    N37D, L63P, V77I, I93L  

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