Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Arruda (2010)
Title Genetic diversity on the integrase region of the pol gene among HIV type 1-infected patients naive for integrase inhibitors in Sao Paulo City, Brazil.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 76
NumPts 76
Subtype B, F, C


Clinical IN Isolates

EI001 EI001 None    V31I, I72V, I113V, T124N, V151I, T218I, Y227F, A265V  
EI003 EI003 None    S17N, L28I, P30A, L45S, I72V, K111R, K160T, V201I, T206S, K211R, M275V  
EI004 EI004 None    S17N, I72V, T124N, T125A, V126L, V151I, D232E, D253H, D256E  
EI005 EI005 None    I72V, K111G, S119P, T124A, A205S  
EI006 EI006 None    E10D, L101I, T112V, S119P, V201I, T206S, I208L, N254K  
EI010 EI010 None    D25E, S119P, T206S, I208L, A282X, S283N  
EI011 EI011 None    D6E, S24G, E35Q, M50I, I72V, V77A, V151I, Q216H  
EI012 EI012 None    E10D, L28I, I72V, L101I, T122I, K156N, E157A, L234I, D256E, A265V, S283G  
EI014 EI014 None    I72V, L101I, V151I, F181Y, I220L, Y227F, D256E  
EI015 EI015 None    D3N, R20K, G134E, E152K, E157K, V201I, A205S, D270N G70K, M178I 
EI016 EI016 None    S17N, V31I, S57N, V79A, L101I, K111R, T125A, V201I, K211R  
EI018 EI018 None    E10D, L28I, S39C, I72V, I84M, E96A, I113L, T122I, T124N, N144H, M154L, K211R, D253E K14T 
EI019 EI019 None    D6N, K7E, V31VI, L101I, V151I  
EI020 EI020 None    D6E, K7R, P30S, V31I, L101I, T206S  
EI023 EI023 None    S17N, V32I, L68I, I73V, L101I, K103R, K111R, I113V, S119T, M154I, V165I, V201I, A205S, K211R, T218I, L234V, D256E, S283G  
EI024 EI024 None    S17N, V32I, L68I, I73V, L101I, K103R, K111R, S119T, M154I, V165I, V201I, A205S, T210I, K211R, T218I, L234V, D256E, S283G, D286N  
EI025 EI025 None    E11D, A21T, A23V, D25E, M50I, I72V, I113V, S119P, T124N, T125A, I135V, K136Q, V201I, K215N, S230N, D256E, D288N  
EI027 EI027 None    I72V, L101I, T124A, I135V, V151I  
EI028 EI028 None    E10D, S39C, L74I, S119P, T124A, V165I, V201I, A205S, K211R, T218I, L234V, D256E, S283G  
EI032 EI032 None   E157Q E11D, S24N, G52R, G59R, G70R, I72V, G82R, S119T, G134E, I141V, V151I, K160Q, R166K, K173R, V201I, K211R, K215N, R224Q, D253E, G272R G4K, G47K, G149E 
EI034 EI034 None    S17N, L28I, L45V, I72V, I84L, L101I, S119P, T124A, T125A, K136Q, Q177L, V201I, L234V, D256E, S283G  
EI035 EI035 None    S17N, V31I, L101I, S119T, T124A, I135V, K136Q, G163A, V201I, A205S, T206S, T218I, L234V, D256E, S283G  
EI038 EI038 None    S39C, L45I, I72V, E96D, L101I, T112I, T124A, V201I, I220L, S230N, D253V  
EI039 EI039 None    V31I, I72V, I84L, L101I, T112I, S119P, K136Q, V201I, A205S, K211R, T218I, L234V, D256E, S283G  
EI040 EI040 None    E11D, A21S, V32I, I72V, L101I, T122I, V201I, K215S, D256E  
EI042 EI042 None    D6S, E10D, V31I, L45V, L101I, T124N, T125A, I135V, K156N K7N 
EI043 EI043 None    V31I, M50I, I72V, I113V, T124A, F181L, V201I, T206S, D256E, A265V, R284G, D286N  
EI044 EI044 None    E10D, I60L, I84M, L101I, N222H  
EI045 EI045 None    K14R, S17N, L28I, T112I, T124A, T125A, V151I, T218I, L234I  
EI046 EI046 None    E11D, S17N, A21S, A23V, L28I, I72V, S119P, T124A, D167E, V201I  
EI047 EI047 None    E11D, L28I, L101I, T122I, K136Q, A205T, L234H, R269K, D270N, S283G, D286N  
EI048 EI048 None    D6T, K7E, K14R, V31I, I72V, T112A, S119P, T124N, T125A, I135V, V201I, Q216QH, I220IL  
EI049 EI049 None    V31I, I72V, Q95S, E96D, G106A, S119T, T124N, T125A, V126L, V151I, I203M, D207E, K211Q  
EI050 EI050 None    E11D, V31I, V32I, V37I, S39C, I72V, L101I, I113V, S119P, T122I, T125P, V201I, I203M, L234I  
EI051 EI051 None    E11D, V31I, I72V, T124A, V151I, T206S, K215Q, D256E  
EI052 EI052 None    V32I, L101I, T124A, K156N, D167E, V201I, A205S, K211R, T218I, L234V, D256E, S283G  
EI053 EI053 None    L63V, S119G, T122I, T125A, V151I  
EI057 EI057 None    K7R, I72V, S119T, I208L, T218I, S230N, D256E, S283G  
EI058 EI058 None    D6N, E13D, S39C, L45Q, I72V, S119G, T122I, T124N, V201I, K211R, I268L I5R 
EI059 EI059 None    K7E, E10D, E35Q, S39N, L45V, I73V, L101I, D167E, V201I, K211R D6A 
EI060 EI060 None    D6N, S17N, V31I, V32I, I72V, I113V, T125A, V126L, K127R, V151I, T218S  
EI061 EI061 None    E11D, V31I, I72V, S119G, T122I, T124A, G193E, V201I  
EI062 EI062 None    S17N, L28I, I72V, T124N, V151I, L234I  
EI063 EI063 None   A128T E11D, E13D, A23V, L28I, V37I, S39C, M50I, S119P, T124A, V201I Q146E 
EI064 EI064 None    E11D, K14R, A21T, V31I, V32I, I72V, V126L, I135V, V201I, S230N, D232E, A265V  
EI065 EI065 None    S17N, L28I, S39C, M50I, I72V, L101I, T124A, I135V, G163E, F181L, V201I, I220V, Y227F  
EI066 EI066 None    D6E, E10D, I73V, L101I, T124N, T125A, I135V, I162V, D286N T66V 
EI067 EI067 None    D6E, E11D, S17T, V31I, V37I, S39N, I72V, S119P, T124A, T125A, K127R, V151I, K211Q, T218L, N222H, L234I  
EI068 EI068 None    G4R, V31I, V32I, G52R, G70R, L74I, G82R, S119P, V126M, G134R, V201I, K211R, D256E, R269K G149R 
EI069 EI069 None    S17N, I72V, L101I, T112V, S119T, S123C, V201I, K215N, Q216K, K219N, N222K, D232E, D256E, S283G  
EI070 EI070 None    D3N, D6N, E10K, R20K, D25E, E35K, I36L, D41N, E48K, M50I, D55N, G59E, D64N, G82E, T112V, T124N, K136Q, G140E, M154I, R166K, D167N, V201I, T218I, L234I, I251L, A265V, R269K, D278A, E287K, D288N G4K, G70K, G106E, R107K, G149E, D253N 
EI071 EI071 None    S17N, L28I, I72V, K111KR, T122I, T124N, T125A, K156N, I182V, I208L, D256E, S283N, R284RK  
EI072 EI072 None    D6S, K7E, E10D, E11D, V31I, V32I, I72V, I73V, I113V, S119P, T124N, T125A, V126M, V201I  
EI073 EI073 None    D6N, K7E, E11D, V31I, M50T, I72V, S119P, V151I, V201I, D256E  
EI075 EI075 None    E10D, A23S, L28I, S39C, I72V, L101I, T122I, T124N, T125TA, K219N, N222K, D253E  
EI076 EI076 None    E11D, R20K, L45V, M50I, E96D, L101I, V201I  
EI077 EI077 None    E11D, V31I, I72V, L74I, S119P, T122I, V151I, V201I, T206S, K219Q, R224Q, D256E, R269K, S283G  
EI079 EI079 None    E11D, L28I, V37I, I60M, I72V, P90S, I113V, T124A, K156N, V201I  
EI080 EI080 None    V31I, M50MT, I72V, L101I, K111T, S119T, Q216H  
EI081 EI081 None    S17N, L28I, S39C, V201I, A205S, K211R, V281M  
EI082 EI082 None    E11D, S24N, V31I, K34R, M50I, I89M, A91T, L101I, V151I, D167E, V201I, T206S, S283G  
EI083 EI083 None    R20K, I72V, T124A, T125A, T206S, T218I, L234I R269RT 
EI084 EI084 None    E11D, K14R, S17T, I72V, T124A, V165I, T206S, L234V, D256E, S283G  
EI085 EI085 None    V31I, I72V, I113V, T124N, T125A, D256E  
EI086 EI086 None    V31I, L45Q, I113V, T124N, T125A, T206S, S230N, A265V  
EI087 EI087 None    E11D, L101I, K111Q, S195T, V201I, D207N, I220L, Y227F, D232E, D256E  
EI088 EI088 None    S17N, I72V, I84L, L101I, S119T, T124A, T125A, K136Q, E152K, R187K, V201I, I203M, T218I, L234V, D256E  
EI089 EI089 None    S17N, V31I, A91S, T124N, G163E, V201I, S255KR  
EI090 EI090 None    K14R, A21S, A23V, L28I, V37I, I72V, S119P, T122I, T124A, E152K, I220M, Y227F, S230N, D256E  
EI091 EI091 None    E11D, S17N, I72V, I84L, L101I, K111R, T112I, S119P, T122V, T125A, K136Q, V165I, I182V, V201I, K211R, T218I, S230N, L234V, D256E, S283G  
EI092 EI092 None    K7R, R20K, I60V, L74I, V165I, E198D, V201I, I204L, D207N, D232E, L234V, D256E, S283G  
EI093 EI093 None    S17N, V31I, S39C, I72V, T124N, I268L  
EI094 EI094 None    E10D, A49P, I72V, K156N, V201I, S283G  
EI095 EI095 None    S17N, M22L, I72V, T125A, L172I, T218I  
EI096 EI096 None    I72V, L101I, V151I  
EI097 EI097 None    E11D, V31I, I72V, L101I, S119G, T122I, K156N, I162V, S230N