Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Bartolo (2009)
Title Antiretroviral drug resistance surveillance among treatment-naive human immunodeficiency virus type 1-infected individuals in Angola: evidence for low level of transmitted drug resistance.
Citation AAC
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 141
NumPts 141
Subtype C, G, A, F, CRF02_AG, CRF45_cpx, CRF18_cpx, H, J, CRF01_AE, D, G + J, CRF05_DF, CRF09_cpx, CRF13_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 141 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
CSE116 01AOCSE116 None    L10V, I13V, K14T, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M  
CSE117 01AOCSE117 None    L10V, I13V, I15V, G16E, M36I, N37D, R41K, L63V, H69K, L89M  
CSE118 01AOCSE118 None    L10I, V11I, I13V, I15V, G16E, K20I, E35D, M36I, N37K, R41K, L63T, H69Q, L89M, I93L  
CSE120 01AOCSE120 None    I13V, K14R, I15V, K20I, E35A, M36I, R41K, L63P, H69K, L89M  
CSE121 01AOCSE121 None    R41K, K70R, I72M  
CSE122 01AOCSE122 None    L19T, M36I, R41K, D60E, H69K, L89M, I93L  
CSE123 01AOCSE123 None    T12P, I15V, G16E, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L  
CSE124 01AOCSE124 None    I13L, E35D, M36I, N37D, R57K, H69K, L89M  
CSE125 01AOCSE125 None    I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M  
CSE126 01AOCSE126 None    L10V, I15V, K20R, E35D, M36I, R41K, R57K, H69Q, L89M  
CSE127 01AOCSE127 None    I13V, K14N, G16E, K20I, E35D, M36I, R41K, I64M, H69K, K70R, V77I, L89M  
CSE128 01AOCSE128 None    L10V, I13V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, H69Y, I72T, L89M  
CSE130 01AOCSE130 None    L10I, I15V, E35D, M36I, N37E, R41K, R57K, D60N, Q61E, I62V, L63P, C67E, H69K  
CSE134 01AOCSE134 None    L10V, T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M  
CSE136 01AOCSE136 None    L10V, I13V, I15V, G16E, M36I, R41K, L63V, I64M, H69K, L89M  
HAB80 01AOHAB80 None    T12S, I13V, I15V, G16E, L19I, M36I, N37S, R41K, L63V, H69K, L89M, I93L  
HAB81 01AOHAB81 None    G16E, K20R, E35D, M36I, R41K, H69K, K70R, L89M  
HAB82 01AOHAB82 None    I13V, L19P, K20I, M36I, R41K, H69K, L89M  
HAB83 01AOHAB83 None    L10V, I13V, I15V, G16E, E35D, M36I, N37S, R41K, R57K, L63T, L89M  
HAB85 01AOHAB85 None    L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, H69S, L89M  
HAB86 01AOHAB86 None    L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, H69S, L89M  
HAB87 01AOHAB87 None    L10V, I13V, G16E, E35D, M36I, R41K, I62V, L63A, H69K, L89M  
HDC228 01AOHDC228 None    L10V, T12I, I13V, I15V, G16E, K20R, E35D, M36I, R41K, L63T, E65D, I72T, L89M  
HDC229 01AOHDC229 None    L10V, T12K, I13V, K14R, I15V, K20I, M36I, N37D, R41K, L63I, C67G, H69K, V82I, L89M  
HDC230 01AOHDC230 None    I13V, G16E, K20R, M36I, D60E, I62V, L63E, H69K, K70R, L89I  
HDC232 01AOHDC232 None   T74P I13V, K14R, L19I, K20I, E35Q, M36I, N37D, R41K, R57K, C67E, H69K, L89M, T96P P79T, T80S, V82Y, N83T 
HDC233 01AOHDC233 None    I13V, G16E, E35D, M36I, R41K, D60E, I62V, L63T, H69K, L89I  
HDC234 01AOHDC234 None    T12P, I13V, G16A, K20R, M36I, R41K, D60E, I62V, L63V, C67Y, G68E, H69K, K70R, L89I  
HDC235 01AOHDC235 None    L10V, I13V, K20R, E35D, M36I, R41K, H69K, L89M  
HDC236 01AOHDC236 None    K14R, I15V, M36I, N37D, R41K, D60E, Q61D, C67E, H69K, L89M, I93L  
HDC237 01AOHDC237 None    L10I, I13V, G16E, K20R, M36I, R41K, D60E, I62V, L63T, C67Y, I72M, L89I, I93L  
HDC238 01AOHDC238 None    I13V, E35N, R41K, D60E, L63P  
HDC239 01AOHDC239 None    L10V, I13V, K14R, G16E, E35D, M36I, R41K, L63H, I64V, H69Q, I72V  
HDC240 01AOHDC240 None    L10I, I13V, G16E, E35D, M36I, P39Q, R41K, R57K, I62V, L63V, E65D, T74S, L89M  
HDC241 01AOHDC241 None    L10V, I13V, I15V, G16E, M36I, R41K, L63V, H69K, L89M  
HDC242 01AOHDC242 None    I13V, K20I, M36I, R41K, L63P, C67E, H69K, L89M  
HDP100 01AOHDP100 None    I13V, K14R, K20I, M36I, R41K, C67E, H69K, V82I, L89M  
HDP112 01AOHDP112 None    L10I, I13V, E35D, M36I, R41K, L63V, C67Y, H69K, L89M  
HDP65 01AOHDP65 None    I13V, L19P, K20I, M36I, R41K, H69K, L89M  
HDP66 01AOHDP66 None    I13V, L19P, K20I, M36I, R41K, H69K, L89M  
HDP67 01AOHDP67 None    I13V, K20I, M36I, R41K, H69K, L89M  
HDP68 01AOHDP68 None    T12S, I15V, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L  
HDP69 01AOHDP69 None    T12S, I15V, L19V, M36I, N37S, R41K, L63T, H69K, L89M, I93L  
HDP70 01AOHDP70 None    T12S, I13L, I15V, L19V, M36I, N37S, R41K, L63I, H69K, L89M, I93L  
HDP71 01AOHDP71 None    I15V, L19I, M36L, N37S, R41K, L63P, H69K, L89M, I93L  
HDP72 01AOHDP72 None    L10I, I13V, I15V, R41K, H69Q, I72V, V77I, V82I, L89M  
HDP73 01AOHDP73 None    L10I, I13V, M36I, R41K, H69Q, L89M  
HDP74 01AOHDP74 None    L10I, I13V, I15V, M36I, R41K, H69Q, I72M, V77I, V82I, L89M  
HDP75 01AOHDP75 None    I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M  
HDP78 01AOHDP78 None    L10I, I13V, R41K, H69Q, I72V, V77I, V82I, L89M  
HJM06 01AOHJM06 None    T12K, I13V, K14R, G16E, K20I, E35D, M36I, H69K, I72V, V77I, L89M  
HJM101 01AOHJM101 None    L10I, I13V, G16E, K20I, E35D, M36I, R41K, L63Q, H69Q, L89M  
HJM113 01AOHJM113 None    R41K, L63P, K70R  
HJM114 01AOHJM114 None    I13V, K20R, M36I, N37D, R41K, I64V  
HJM115 01AOHJM115 None    T12N, K14R, I15V, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L  
HJM31 01AOHJM31 None    I13V, K20I, E35N, M36I, N37D, H69K, L89M  
HJM60 01AOHJM60 None    Q7R, R8X, K14R, I15V, L19V, M36L, N37S, R41K, L63P, H69K, L89M, I93L  
HJM61 01AOHJM61 None    I13V, K14R, G17E, K20I, E34K, M36I, N37D, Q61N, I62M, L63A, C67E, H69K, V77I, L89M  
HJM62 01AOHJM62 None    L10I, I13V, M36I, R41K, L63P, H69Q, L89M  
HJM63 01AOHJM63 None    L10I, I13V, L19V, K20I, M36I, R41K, C67N, H69K, V82I, L89M  
HJM64 01AOHJM64 None    T12S, I13V, I15V, L19I, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
HSL20 01AOHSL20 None    L10V, I13V, K14Q, I15V, G16E, E35D, M36I, N37I, R41K, R57K, L63T, E65D, I72T, L89M  
HSL38 01AOHSL38 None    L10V, I13V, I15V, E35D, M36I, N37D, R41K, R57K, D60E, Q61E, L63P, H69K, L89M  
LFA11 01AOLFA11 None    I13V, K14R, K20I, E35D, M36I, R41K, C67E, H69K, V82I, L89M  
LFA13 01AOLFA13 None    L10V, I13V, I15V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M  
LFA14 01AOLFA14 None    G16E, E35D, M36I, R41K, L63G, H69K, L89M  
LFA15 01AOLFA15 None    T12S, I15V, G16E, L19I, K20M, M36L, N37S, L63N, H69K, L89I, I93L  
LFA16 01AOLFA16 None    T12S, I15V, G16E, L19I, M36I, L63A, H69K, L89M, I93L  
LFA17 01AOLFA17 None    L10I, I13V, M36I, N37D, R41K, L63V, H69K, L89M  
LFA18 01AOLFA18 None    G16E, E35D, M36I, R41K, L63G, H69K, L89M  
LFA19 01AOLFA19 None    L10I, I13V, M36I, N37D, R41K, L63V, H69K, L89M  
LFA89 01AOLFA89 None    I13V, K20I, E34K, M36I, N37E, P39S, Q61N, I62M, L63S, I64L, C67E, H69K, V77I, L89M  
LFA90 01AOLFA90 None    L10I, I13V, K20I, E35D, M36I, L63T, H69K, L89M  
LFA91 01AOLFA91 None    I13V, K14R, Q18K, K20I, M36I, R41K, C67E, H69K, V82I, L89M  
LFA92 01AOLFA92 None    I13V, K20I, E34K, M36I, N37E, P39S, Q61N, I62M, L63S, I64L, C67E, H69K, V77I, L89M  
LFA93 01AOLFA93 None    G16A, E35D, M36I, R41K, H69K, V77I, L89M  
LFA94 01AOLFA94 None    L10P, T12S, G16E, E35D, M36I, R41K, H69K, L89M  
LFA95 01AOLFA95 None    T12K, I13V, I15L, G16E, K20I, E35D, M36I, R41K, L63M, H69K, K70R, V77I, L89M  
LFA96 01AOLFA96 None    L10V, I13V, L19I, M36I, R41K, L63S, H69K, L89M  
LFA97 01AOLFA97 None    L10V, I13V, G16E, L19P, K20V, M36I, N37D, R41K, E65D, H69K, K70R, L89M N88H 
LFA98 01AOLFA98 None    I13V, M36I, N37D, Q61E, L63P, C67E, H69K, V82I, L89I  
LFA99 01AOLFA99 None    T12K, I13V, I15L, G16E, K20I, E35D, M36I, R41K, L63M, H69K, K70R, V77I, L89M  
SNS01 01AOSNS01 None    I13V, K14R, K20I, E35Q, M36I, R41K, C67E, H69K, V82I, L89M  
SNS02 01AOSNS02 None    L10I, I13V, K14R, L19X, E21K, M36I, R41K, C67N, H69K, L89M K20N 
SNS03 01AOSNS03 None    G16E, E35D, M36I, R41K, L63C, H69K, L89M  
SNS04 01AOSNS04 None    T12K, I13V, K20I, E35N, M36I, N37D, H69K, L89M  
SNS09 01AOSNS09 None    I13V, K14R, K20I, M36I, N37S, R41K, C67E, H69K, V82I, L89M  
SNS104 01AOSNS104 None    L10V, T12S, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M  
SNS106 01AOSNS106 None    V11I, T12K, I13V, K14R, K20I, E35D, M36I, N37E, R41K, D60E, H69K, L89M  
SNS107 01AOSNS107 None    L10I, I13V, K14R, G16E, K20I, M36I, R41K, L63T, L89M H69A 
SNS110 01AOSNS110 None    I13V, K14R, K20I, M36I, R41K, H69K, V82I, L89M  
SNS21 01AOSNS21 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
SNS22 01AOSNS22 None    I13V, G16E, L19I, K20I, E35D, M36I, R41K, H69K, K70R, V77I, L89M  
SNS23 01AOSNS23 None    I13V, K14R, K20I, E35D, M36I, R41K, D60E, L63P, C67S, H69K, V82I, L89M  
SNS24 01AOSNS24 None    I13V, L19S, K20I, E35D, M36I, R41K, H69K, L89M  
SNS25 01AOSNS25 None    L10V, I13V, I15V, E35D, M36I, R41K, H69K, K70R, L89M  
SNS29 01AOSNS29 None    T12K, I13V, K14R, G16E, L19I, K20I, E35D, M36I, R41K, I64V, H69K, K70R, V77I, L89M  
SNS32 01AOSNS32 None    L10I, I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69Q, K70R, L89M  
SNS35 01AOSNS35 None    L10I, I13V, E35D, M36I, R41K, H69K, L89M  
SNS36 01AOSNS36 None    G16E, E35D, M36I, P39S, R41K, H69K, K70R, L89M  

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