Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Tebit (2009)
Title Analysis of the diversity of the HIV-1 pol gene and drug resistance associated changes among drug-naive patients in Burkina Faso.
Citation J Med Virol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 104
NumPts 104
Subtype CRF02_AG, G, A, CRF45_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 104 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
TR101 TR101 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89I  
TR106 TR106 None    I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, L89M  
TR107 TR107 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
TR108 TR108 None    I13V, K20I, M36I, N37S, R41K, H69K, L89M  
TR112 TR112 None    I13V, K14R, K20I, M36I, R41K, G48R, I50N, Q61H, H69K, A71T, L89I R57S 
TR113 TR113 None    I13V, K14R, G16E, K20I, M36I, L38F, R41K, I62V, H69K, L89M  
TR116 TR116 None    I13V, K14I, G16E, L19Q, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
TR12 TR12 None    I13V, K14R, I15V, K20I, M36I, R41K, L63P, H69K, A71T, L89I R57S 
TR132 TR132 None    I13V, K20I, E35D, M36I, R41K, H69K, L89M  
TR133 TR133 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, L89M, C95W  
TR135 TR135 None    L10I, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
TR137 TR137 None    I13V, K14R, K20I, M36I, N37D, R41K, H69K, L89M  
TR140 TR140 None    I13V, K14R, I15V, G16E, K20I, M36I, R41K, L63P, H69K, L89M  
TR142 TR142 None    L10V, I13V, K20R, M36I, N37D, R41K, H69K, L89M  
TR143 TR143 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
TR144 TR144 None    I13V, K14R, G17E, K20I, M36I, N37NY, R41K, I64M, H69K, K70R, L89M  
TR145 TR145 None    I13V, K14R, K20I, M36I, R41K, R57K, L63P, H69K, K70R, L89M  
TR146 TR146 None    I13V, K14R, Q18P, K20I, E21K, E35D, M36I, R41K, I62V, L63H, G68E, H69N, L89I  
TR147 TR147 None    I13V, I15V, K20I, E35D, M36I, R41K, H69K, L89M  
TR148 TR148 None    I13V, K14R, I15V, K20I, E35D, M36I, N37D, R41K, I64M, H69K, K70R, L89M R57I 
TR149 TR149 None    I13V, K14R, K20I, M36I, R41K, L63H, H69K, A71T, L89I  
TR14b TR14b None    I13V, K14I, K20I, E35D, M36I, N37D, R41K, R57K, L63P, H69K, K70R, L89M  
TR150 TR150 None    I13A, K20I, M36I, R41K, Q61E, L63P, H69K, K70R, L89M  
TR152 TR152 None    I13V, K14R, G16E, K20I, E35D, M36I, L38F, R41K, L63H, H69K  
TR153 TR153 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TR154 TR154 None    L10I, V11I, I13V, K14R, G16E, L19P, K20I, M36I, R41K, L63S, C67Y, H69K, K70R, L89M  
TR155 TR155 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
TR156 TR156 None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
TR158 TR158 None    L10V, I13V, L19P, K20I, M36I, R41K, I64V, H69K, L89M  
TR161 TR161 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, T74S, L89M  
TR162 TR162 None    I13V, K14R, K20I, E35D, M36I, R41K, K43R, H69K, L89M  
TR163 TR163 None    I13V, K14R, I15V, K20I, M36I, N37E, R41K, I64M, H69K, K70R, L89M  
TR165 TR165 None    I13A, K14R, K20I, M36I, R41K, L63P, H69K, K70R, I72M, L89I  
TR166 TR166 None    I13A, K20I, M36I, R41K, L63I, I64V, H69K, K70R, L89I  
TR167 TR167 None    I13V, K14R, K20I, M36I, N37D, L38F, R41K, H69K, L89M  
TR171 TR171 None    I13V, K14R, K20I, M36I, R41K, H69K, K70R, V82I, L89M  
TR172 TR172 None    I13V, I15V, K20I, M36I, N37D, L63H, H69K, L89M  
TR173 TR173 None    I13V, K20I, E35D, M36I, R41K, L63H, H69K, L89M  
TR174 TR174 None    I13A, K20I, M36I, N37D, L63N, H69K, K70R, I72T, L89I  
TR177 TR177 None    I13V, K14R, K20I, M36I, R41K, Q61H, L63P, H69K, K70R, V82I, L89M  
TR178 TR178 None    L10V, I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
TR179 TR179 None    L10V, I13V, K20I, M36I, R41K, L63P, H69K, L89M  
TR185 TR185 None    L10I, I13V, K14R, G16E, E35D, M36I, L63V, H69K, L89M  
TR186 TR186 None    T12A, I13V, K14R, I15V, K20I, E35D, M36I, L63P, G68E, H69K, I72V, L89M  
TR187 TR187 None    I13V, K14R, G17D, Q18K, K20I, E35D, M36I, H69K, L89M  
TR193 TR193 None    I13V, K14R, K20I, M36I, R41K, L63S, H69K, I72M, L89M  
TR194 TR194 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M A28P 
TR195 TR195 None    T12A, I13V, K14R, G16E, K20I, M36I, R41K, L63V, I64M, H69K, L89M A28P 
TR197 TR197 None    I13V, K20I, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
TR198 TR198 None   L89V I13V, K20M, M36I, R41K, H69K, K70R  
TR199 TR199 None    E35D, M36I, R41K, H69K, L89M  
TR200 TR200 None    I3V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
TR208 TR208 None    I13A, K20I, M36I, R41K, H69K, L89M  
TR21 TR21 None    I13V, K14R, I15V, G17E, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
TR212 TR212 None    I13A, L19P, K20I, M36I, R41K, L63LV, I64M, H69K, L89M  
TR213 TR213 None    L10I, I13V, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
TR214 TR214 None    I13V, K14R, G16E, K20I, M36I, R41K, L63T, H69K, K70R, L89M  
TR215 TR215 None    L10I, I13V, K14R, G16E, L19P, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
TR216 TR216 None    V11I, I13A, K20I, M36I, R41K, L63P, H69K, K70R, L89I  
TR217 TR217 None    L10I, T12A, I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, L89M  
TR218 TR218 None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
TR219 TR219 None    T12S, I13V, K14R, G17E, Q18H, K20I, E35D, M36I, N37H, R41K, R57K, L63P, I64M, H69K, L89M  
TR230 TR230 None    V11I, I13V, K20I, E35D, M36I, R41K, L63P, H69K, V77I, L89M  
TR231 TR231 None    I13V, K14R, I15V, K20I, M36I, R41K, H69K, K70R, L89M  
TR232 TR232 None    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, V82I, L89M  
TR234 TR234 None    I13V, K14R, K20I, M36I, R41K, K43R, H69K, K70R, L89M  
TR235 TR235 None    I13V, K14R, K20I, E35D, M36I, R41K, R57K, H69K, L89M  
TR236 TR236 None    I13V, K14R, I15V, K20I, M36I, R41K, I64M, H69K, L89M  
TR237 TR237 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
TR239 TR239 None    I13V, K14R, K20I, T31P, E35D, M36I, R41K, L63S, I64M, H69K, L89M  
TR240 TR240 None    I13V, K14R, I15V, K20I, M36I, R41K, I64M, H69K, K70R, L89M, I93IM  
TR241 TR241 None    I13V, K14R, G16E, L19P, K20I, E35D, M36I, N37S, R41K, L63H, H69K, L89I  
TR242 TR242 None    I13V, K14R, K20I, M36I, R41K, H69K, K70R, L89M  
TR244 TR244 None  N88T  I13V, K14R, K20I, E35D, M36I, R41K, K43R, L63P, H69K, L89M  
TR245 TR245 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
TR246 TR246 None    I13V, K20I, M36I, R41K, I64L, H69K, K70R, I72M, L89M  
TR254 TR254 None    I13V, L19P, K20I, M36I, R41K, I64M, H69K, L89M  
TR256 TR256 None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
TR257 TR257 None    L10I, I13V, K14R, E35D, M36I, N37D, R41K, H69K, L89M  
TR258 TR258 None    I13V, K20I, M36I, R41K, H69K, L89M  
TR259 TR259 None    I13V, L19P, K20I, M36I, R41K, I64M, H69K, L89M  
TR261 TR261 None    L10V, V11I, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
TR27 TR27 None    I13V, K14R, K20I, M36I, R41K, K43KR, L63LP, H69K, K70KR, L89M  
TR37 TR37 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TR51 TR51 None    I13V, K20I, M36I, R41K, G68E, H69R, L89M  
TR54 TR54 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TR61 TR61 None    I13A, K14R, K20I, M36I, R41K, L63Q, H69K, L89M  
TR62 TR62 None    I13A, K14R, K20I, M36I, R41K, H69K, L89M  
TR63 TR63 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, R57K, H69K, L89M  
TR66 TR66 None    I13V, Q18E, K20I, M36I, R41K, L63P, H69K, P79D, L89M  
TR67 TR67 None    I13V, K20I, E35D, M36I, R41K, L63LP, H69K, L89M  
TR69 TR69 None    I13A, K20I, M36I, R41K, I64IM, H69K, L89M  
TR70 TR70 None    T12E, I13V, K14R, I15V, K20I, E35D, M36I, R41K, Q58K, I64M, H69K, L89M  
TR72 TR72 None    I13V, K14R, K20I, M36I, N37D, R41K, K43R, H69K, K70R, L89M  
TR83 TR83 None    I13V, G16E, K20I, E35D, M36I, R41K, I64L, H69K, K70R, L89M  
TR90 TR90 None    I13V, K14R, G17E, K20I, M36I, N37S, R41K, H69K, L89M  
TR92 TR92 None    T12A, I13V, K14R, I15V, G17E, K20I, E35D, M36I, N37D, L63P, I64M, H69K, L89M  
TR95 TR95 None    I13V, K14R, K20I, M36I, R41K, K43R, H69K, K70R, L89M  
TR96 TR96 None    V11VI, I13A, K14R, I15V, K20I, E35D, M36I, R41K, R57K, H69K, L89M  
TR99 TR99 None    L10V, I13V, K14R, K20I, M36I, R41K, C67Y, H69K, T74S, L89M  

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