Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Bartolo (2009)
Title HIV-1 genetic diversity and transmitted drug resistance in health care settings in Maputo, Mozambique.
Citation JAIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 111
NumPts 111
Subtype C, CRF18_cpx, G, CRF45_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 111 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
CL10.81 CL10.81 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, Q61H, L63S, H69K, L89M  
CL11.100 CL11.100 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, K45R, L63P, H69K, V82I, L89M, I93L  
CL12.89 CL12.89 Unknown    T12S, I15V, L19I, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
CL13.84 CL13.84 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, I93L  
CL23.103 CL23.103 Unknown    Q7R, T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, I93L  
CL7.82 CL7.82 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, I93L  
CL8.83 CL8.83 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, H69K, L89M  
CMM11 CMM11 Unknown    L19V, K20R, M36I, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
CMM114 CMM114 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
CMM116 CMM116 Unknown    T12S, I15V, L19I, K20R, M36I, N37A, R41K, R57K, D60E, H69K, L89M, I93L  
CMM117 CMM117 Unknown    T12S, I15V, L19T, K20R, E35D, M36I, R41K, Q61E, H69K, L89M, I93L  
CMM121 CMM121 Unknown    T12S, I15V, L19V, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
CMM129 CMM129 Unknown    L19I, E35D, M36I, R41K, D60E, H69K, V82I, L89M, I93L  
CMM135 CMM135 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, R41K, K45R, L63S, H69K, L89M, I93L  
CMM137 CMM137 Unknown    T12S, L19T, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
CMM143 CMM143 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, K45R, D60E, Q61E, L63P, H69K, L89M, I93L  
CMM22 CMM22 Unknown    V11I, I13V, K14R, K20V, M36I, R41K, H69K, L89M  
CMM25 CMM25 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
CMM28 CMM28 Unknown    T12A, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
CMM30 CMM30 Unknown    T12S, I15V, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
CMM40 CMM40 Unknown    T12S, I15V, L19I, M36I, R41K, L63H, H69K, L89M, I93L  
CMM54 CMM54 Unknown    T12A, K14R, I15V, L19I, M36I, R41N, D60E, L63P, H69K, L89M, I93L  
CMM70 CMM70 Unknown    T12S, I15V, G16E, L19I, M36I, N37K, R41K, L63C, H69K, I93L  
CMM72 CMM72 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, R87K, I93L  
CMM76 CMM76 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
CMM92 CMM92 Unknown    T12S, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
CMM93 CMM93 Unknown    K14S, I15V, L19I, M36L, R41K, L63P, H69K, L89M, I93L  
CMM97 CMM97 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, I66V, H69K, I93L  
CMM99 CMM99 Unknown    T12S, L19I, M36I, R41K, K45R, L63A, H69K, L89M, I93L  
D01 D01 Unknown    K14N, K20R, M36I, N37K, R41K, Q61D, H69K, L89M, I93L  
D02 D02 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, N37D, R41K, D60E, H69K, L89M, I93L  
D03 D03 Unknown   K20T I15V, E35D, M36I, R41K, K43R, L63P, H69K, T74S, I93L  
D04 D04 Unknown    L10V, I13V, I15V, G16E, M36I, N37D, R41K, L63V, H69K, L89M  
D05 D05 Unknown    I15V, L19I, M36I, N37S, R41K, L63T, I64M, H69K, V82I, L89M, I93L  
D2045 D2045 Unknown    T12S, I15V, L19I, M36I, N37D, R41K, D60E, L63P, H69K, R87K, I93L  
D435 D435 Unknown    T12S, I15V, G16E, L19T, K20M, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
HCM06 HCM06 Unknown    Q7R, T12S, K14G, I15V, G16E, L19T, E34G, E35G, M36I, N37D, K43R, K45R, D60E, I62V, H69K, L89M, I93L K20E, R41G 
HCM07 HCM07 Unknown    T12S, I15V, L19V, M36I, R41K, Y59F, L63P, H69K, L89M, I93L  
HCM35 HCM35 Unknown    K14N, L19I, M36I, N37K, R41K, Q61D, H69K, L89M, I93L  
HCM39 HCM39 Unknown    I15V, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
HCM55 HCM55 Unknown    T12S, L19I, E35D, M36I, N37K, R41K, R57K, L63P, H69K, T74A, L89M  
HCM57 HCM57 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63S, H69K, I93L P9L 
HCM58 HCM58 Unknown    T12S, I15V, L19T, K20R, M36I, R57K, L63V, H69K, T74S, L89M  
HCM74 HCM74 Unknown    T12S, I15V, L19I, M36I, R41P, L63T, H69K, I72T, T74A, L89M, I93L  
HCM75 HCM75 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M D25Y, T26A 
HMM64 HMM64 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, H69K, L89M  
PH79 PH79 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M  
UNIV08 UNIV08 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, K45R, D60E, C67E, H69K, L89M, I93L  
UNIV09 UNIV09 Unknown    T12S, I15V, L19V, M36I, R41K, H69K, L89M, I93L  
UNIV10 UNIV10 Unknown    T12A, I15V, L19I, N37S, R41K, L63P, H69K, T74S, L89M, I93L  
UNIV104 UNIV104 Unknown    T12S, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
UNIV105 UNIV105 Unknown    T12S, I15V, L19V, K20R, M36L, R41K, L63P, H69K, V77I, L89M, I93L  
UNIV106 UNIV106 Unknown    I13V, K14R, K20I, E35D, M36I, N37Y, R41K, H69K, V82I, L89M I93T 
UNIV107 UNIV107 Unknown    T12S, I15V, G16E, L19I, M36I, R41K, L63T, H69K, L89M, I93L  
UNIV108 UNIV108 Unknown    T12S, L19I, M36I, R41K, K45R, L63S, H69K, L89M, I93L  
UNIV110 UNIV110 Unknown    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, V75I, L89M, I93L  
UNIV111 UNIV111 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
UNIV112 UNIV112 Unknown    T12S, I15V, L19T, M36I, R41K, L63T, H69K, I93L  
UNIV113 UNIV113 Unknown    K14N, K20R, M36I, N37K, R41K, Q61D, H69K, L89M, I93L C95R 
UNIV118 UNIV118 Unknown    G16E, M36I, R41K, H69K, L89M, I93L  
UNIV12 UNIV12 Unknown    I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
UNIV122 UNIV122 Unknown    T12S, I15V, L19V, M36I, R41K, H69K, L89M, I93L L97A 
UNIV123 UNIV123 Unknown    T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L, T96A  
UNIV124 UNIV124 Unknown    T12S, I15V, G16E, L19I, M36L, N37S, R41K, L63T, H69K, I93L  
UNIV125 UNIV125 Unknown    T12S, K14R, L19V, K20R, M36I, R41K, H69K, L89M, I93L C95R 
UNIV127 UNIV127 Unknown    T12S, I15V, L19I, M36I, R41K, L63V, H69K, L89M, I93L  
UNIV128 UNIV128 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
UNIV13 UNIV13 Unknown    T12S, I15V, L19T, K20R, E35D, M36I, R41K, K45R, L63T, H69K, L89M, I93L  
UNIV130 UNIV130 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M D60G 
UNIV131 UNIV131 Unknown    T12A, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
UNIV132 UNIV132 Unknown    L10P, I15V, L23F, M36I, R41K, H69K, L89M, I93L  
UNIV133 UNIV133 Unknown    I15V, M36I, R41K, H69K, L89M, I93L  
UNIV134 UNIV134 Unknown    T12S, I15V, L19I, K20R, M36I, R41K, Q61H, I62V, L63H, H69K, K70Q, V77I, L89M, I93L  
UNIV14 UNIV14 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37K, L63T, H69K, I93L  
UNIV140 UNIV140 Unknown    V11I, I13V, K14R, K20I, M36I, R41K, H69K, L89M  
UNIV141 UNIV141 Unknown    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
UNIV142 UNIV142 Unknown    I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
UNIV144 UNIV144 Unknown    T12S, I15V, G16E, L19I, M36I, R41K, L63H, H69K, I93L  
UNIV145 UNIV145 Unknown    I13V, K20I, E35D, M36I, R41K, H69K, V77I, V82I, L89M  
UNIV148 UNIV148 Unknown    T12S, I15V, L19V, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
UNIV15 UNIV15 Unknown    K14S, I15V, G16E, L19I, K20R, M36I, R41K, L63A, H69K, L89M, I93L I85S 
UNIV150 UNIV150 Unknown    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
UNIV151 UNIV151 Unknown    I15V, L19I, E35D, M36I, R41K, K45R, H69K, L89M, I93L  
UNIV153 UNIV153 Unknown    I13V, K14R, K20I, E35D, M36I, R41K, Q61N, C67E, H69K, I72T, V77I, V82I, L89M  
UNIV17 UNIV17 Unknown    T12S, K14N, I15V, L19T, M36I, R41K, R57K, Q61H, L63P, H69K, L89M, I93L E35E_G 
UNIV18 UNIV18 Unknown    T12S, I15V, L19I, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
UNIV19 UNIV19 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, L63S, H69K, L89M, I93L  
UNIV20 UNIV20 Unknown    T12S, I15V, G16E, L19I, M36I, L63S, H69K, L89M, I93L, L97I  
UNIV21 UNIV21 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, I93L V32E, C95R 
UNIV24 UNIV24 Unknown    T12S, L19I, M36I, R41K, D60E, L63P, H69K, I93L  
UNIV26 UNIV26 Unknown    K14R, I15V, L19I, E35D, M36I, N37D, R41K, H69K, T74S, L89M, I93L  
UNIV31 UNIV31 Unknown    T12S, I15V, G16E, L19I, E35D, M36I, N37E, L63T, H69K, I93L  
UNIV33 UNIV33 Unknown    T12S, I15V, L19I, N37S, R41K, L63P, H69K, V77I, L89M, I93L  
UNIV36 UNIV36 Unknown    T12S, I15V, L19I, E35D, M36I, R41K, K45R, D60E, L63P, H69K, K70R, L89M, I93L  
UNIV38 UNIV38 Unknown    T12S, I13V, I15V, L19I, M36I, R41K, D60E, L63S, H69K, L89M, I93L  
UNIV41 UNIV41 Unknown    T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
UNIV42 UNIV42 Unknown    T4P, L5F, T12S, I15V, L19I, E35D, M36I, N37E, R41K, L63S, H69K, I93L  
UNIV46 UNIV46 Unknown    I15V, L19I, K20R, M36I, R41K, L63P, H69K, K70Q, V77I, L89M, I93L  
UNIV48 UNIV48 Unknown    T12S, I15V, L19I, M36L, R41K, L63P, H69K, L89M, I93L  
UNIV49 UNIV49 Unknown    T12S, L19I, M36I, R41K, L63P, H69K, L89M, I93L  

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