Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Bonhoeffer (2004)
Title Evidence for positive epistasis in HIV-1.
Citation Science
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 9467
NumPts 9467
Subtype B, CRF02_AG, C, D, A, CRF01_AE, G, CRF05_DF, CRF18_cpx, CRF12_BF, CRF45_cpx, G + J, H


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Page 1   listing Isolate 1 to Isolate 100 from Total 9467 Clinical PR Isolates

03-124636 03-124636 Unknown  I54IV, V82VA  L10V, L63LP, V77VI  
03-124638 03-124638 Unknown    L10I, L33LV, N37S, I62V, L63T, I64V, C67W, I72IT  
03-124640 03-124640 Unknown  D30N N88D I13V, E35D, M36IV, L63P, A71V, V77IM  
03-124641 03-124641 Unknown  M46I, I50V, I54V, V82A, L90M  L10I, I15V, K20R, E35D, M36I, R41K, Q61E, I62V, L63P, A71I, I85V, I93L  
03-124642 03-124642 Unknown    L10V, L63P  
03-124650 03-124650 Unknown  I54V, V82M, L90M G73S L10I, T12S, L19I, N37T, R41RK, I62V, L63P, A71V, V77I  
03-124653 03-124653 Unknown    I13IV, I62V, L63P, I72V  
03-124654 03-124654 Unknown    R41K, Q61N  
03-124659 03-124659 Unknown    T12AE, I13V, K14KR, Q18QH, N37ND, L63LP, I64IV  
03-124670 03-124670 Unknown  M46MI  T12TA, K14R, G17GE, N37T, R41K, L63P  
03-124673 03-124673 Unknown    T12N, I15V, L19I, N37C, L63T, V77I P81PS, L97L* 
03-124679 03-124679 Unknown    L33V, N37CS, R41K, L63T, I64V, E65D  
03-124681 03-124681 Unknown    L10M, V11A, L19Q, I62V, L63AP, A71AV, V77I, I93L  
03-124688 03-124688 Unknown    T12TA, G16E, I62V, L63H, V77I  
03-124699 03-124699 Unknown  V32I, M46I, I47V, I54L, V82A, L90M L33LF, F53L, L89V L10IV, V11VL, I15V, K20R, E35D, M36I, N37E, K55R, R57K, I62V, L63P, A71I, I85V, I93L  
03-124705 03-124705 Unknown  L90M L10F, K20T T12S, K14R, I15V, E35D, M36I, R41K, I62V, L63P, I72V, Q92QK, I93L  
03-124754 03-124754 Unknown    I13V, K14R, L19V, E35D, L63P, I64V, V75I, Q92QKR, I93IM  
03-124757 03-124757 Unknown  V32I, M46L, I54V, I84V, L90M L10F, L33F, K43T, N88D I13V, I15V, K20R, E35ED, M36MI, N37NT, L63P, C67F, H69Q, A71V, V77VI, T91S  
03-124758 03-124758 Unknown    I13IV, I15IV, E35D, M36I, R41K, I62V, L63S, K70R  
03-124775 03-124775 Unknown    M36MI, Q61E, L63P  
03-124783 03-124783 Unknown  V32I, M46L  I15V, E35ED, M36MIV, N37S, I62IV, L63R, I66F, K70E, A71V, V82I  
03-124784 03-124784 Unknown    K14R, N37D, K43R, L63P, I93IL  
03-124788 03-124788 Unknown  M46ML, I54IV, V82VA, L90LM K20KT, L33LF, G73GS, L89LV L10V, T12TI, I13V, I15IV, M36ML, I62V, L63P  
03-124789 03-124789 Unknown    I13V, K20R, L63P, I64V, V77I  
03-124796 03-124796 Unknown  G48V, I50V, I54A, V82A, L90M  L10I, G16A, I62V, L63P, A71V, I72V, V77I, I93L  
03-124804 03-124804 Unknown    I13IV, I64IV, I72V  
03-124814 03-124814 Unknown    K14R, M36MI, R41K, K43R, L63P, V77I, I93L  
03-124816 03-124816 Unknown    I13V, K14KR, N37D, I62IV, L63P  
03-124817 03-124817 Unknown   K20T, L23I L10I, I13V, K14KR, E35X, M36I, D60E, Q61DE, I62IV, L63P, I64V, C67Y, A71AT, I72T, V77VI, V82I  
03-124820 03-124820 Unknown    G16E, E35ED, P39Q, R41K, K43KR, I62IV, A71V, I72T, I93L  
03-124822 03-124822 Unknown      
03-124825 03-124825 Unknown    I13V, E35D, N37T, L63P, I64V, V77I  
03-124830 03-124830 Unknown    L10I, K14KR, R41K, R57RK, D60DE, Q61QH, L63S, I64V, V77I  
03-124832 03-124832 Unknown  V32I, I47V  L10LV, I15IV, E35D, M36MV, N37S, R41K, L63P, H69HQ, V77I, I93L  
03-124834 03-124834 Unknown    T12NS, I15V, L19I, E35D, N37NS, P39PS, R41K, L63P, K70KR  
03-124835 03-124835 Unknown    I15V, E35D, L63P  
03-124838 03-124838 Unknown    I13V, E35D, N37D, D60E, I64V  
03-124840 03-124840 Unknown  M46I, I54V, V82A, I84V L10F, L89LV I13V, K20M, E34Q, N37D, P39PL, R41K, F53W, D60DE, L63LP, H69HY, A71T, T74TS, P79N  
03-124843 03-124843 Unknown  I54V, V82VA  L10LI, T12Q, L19I, E35D, M36MI, R41RK, D60E, L63P, K70E, A71V, I93L  
03-124845 03-124845 Unknown  M46I, I54V, V82S L24I, F53L L10I, I15V, K20R, E35D, M36I, N37D, R41RK, K55KR, R57K, I62V, L63E, I64V, E65D, T74A  
03-124847 03-124847 Unknown    K14KR, I62IV, L63H, I72IV, V77VI  
03-124851 03-124851 Unknown    I13IV, I15V, M36I, L63Q, I64IV  
03-124856 03-124856 Unknown    I15V, M36I, N37S, I62V, L63X, I64ILM  
03-124857 03-124857 Unknown  V32I, M46I, I47V, I54M, V82A, L90M L33LF, K43T L10I, I15IV, L19LV, K20KR, E35D, M36I, K55KN, L63P, H69HY, A71V, I72IV, I85IV, Q92K  
03-124858 03-124858 Unknown    I15V, M36I, N37D, I93IL  
03-124859 03-124859 Unknown  L90LM  I13V, L63P, V77I  
03-124860 03-124860 Unknown    I13V, L63P  
03-124861 03-124861 Unknown    L63P, I72T, V77I, I93L  
03-124862 03-124862 Unknown  I54V, V82A, L90M K43T L10IV, I15V, G16GA, L19LV, K20R, M36I, R41K, I62V, L63P, K70R, L89LM  
03-124863 03-124863 Unknown    E35D, N37S, L63P, I72V, V77I, I93L  
03-124865 03-124865 Unknown  M46MI, I54V, I84V, L90M L10F, G73T I13IV, I15IV, K20I, M36MI, N37NS, K55R, I62V, L63P  
03-124866 03-124866 Unknown  D30N K20T, N88D I13V, I15V, Q61QH, L63P, K70R, A71V, V77I  
03-124871 03-124871 Unknown    L10I, I15IV, M36I, R41K, L63S, I93L  
03-124873 03-124873 Unknown  D30N, M46I, I50V, L90M L10LF, L33F, N88D V11I, I13V, E35D, M36I, R57K, I62V, L63P, I66IL, A71T, I93IM  
03-124875 03-124875 Unknown  I54V, V82A, L90M  L10I, K14KR, I15V, G16A, I62V, L63P, A71V, I72IT  
03-124876 03-124876 Unknown    E35ED, M36MI, N37S, L89M  
03-124881 03-124881 Unknown    L10I, E35D, M36L, L63P, I64L  
03-124882 03-124882 Unknown    M36MI, R41RK, I64V  
03-124883 03-124883 Unknown    L33V, P39S, I64V, H69Y, I72IV  
03-124887 03-124887 Unknown    K14KR, R41RK, L63C, V77VI  
03-124898 03-124898 Unknown    E35D, I62V, L63P, V82I  
03-124905 03-124905 Unknown  V32VI, M46MI, I47IV L24LI, K43KT, T74TPS L10LI, E35D, N37E, I62IV, L63LH, I64V, I72IV, V82X, L89LM  
03-124906 03-124906 Unknown    I13IV, E35D, N37NS, L63P, H69HQ  
03-124918 03-124918 Unknown    I15V, E35D, M36MI, N37D, D60E, Q61E, L63P, V77VI, I93L  
03-124922 03-124922 Unknown    N37D, D60E, Q61E, L63P, H69Q, V77I  
03-124923 03-124923 Unknown    K20KR, L63P  
03-124934 03-124934 Unknown    L10LI, T12A, I13IV, G16E, L63S, I64V, V77I  
03-124936 03-124936 Unknown  I54M, L90M K20T, L33LF, Q58E L10V, I13V, K14KR, I15V, R41RK, L63P, A71I, I72V, T74S, V77I, I93L G52GS 
03-124940 03-124940 Unknown  M46I, L90M G73S L10I, Q18H, K20V, A71V, I72KR, V77I, I85V  
03-124944 03-124944 Unknown    I15IV, E35D, M36I, N37D, R57K, L63LP, I72V  
03-124945 03-124945 Unknown  M46MI, L90M Q58E, T74P L10I, R41RK, I62V, L63P, V82VI  
03-124946 03-124946 Unknown  D30N, L90M F53L, N88D L10V, T12A, I13V, E35D, M36I, L63P, I64V, A71V, V75I  
03-124956 03-124956 Unknown  D30N L10FI, N88D I13IV, E35D, M36MI, N37S, R57RK, Q61H, L63P, A71AT, I72T, V77I, I93L  
03-124960 03-124960 Unknown    L10LV, E35ED, N37NS, R41RK, I64IV, V77VI  
03-124961 03-124961 Unknown    K14KR, E35D, R41K, L63P, A71T, V77I, I93L  
03-124970 03-124970 Unknown      
03-124971 03-124971 Unknown    K14KR, L63P, I72M D30DG, P44PL 
03-124978 03-124978 Unknown    L19I, E21EK, H69Y  
03-124984 03-124984 Unknown    I13V, K14KR, K20I, M36I, R41K, H69K, L89M  
03-124985 03-124985 Unknown  D30DN N88ND L19T, E35D, M36MI, N37D, I64IV, K70KR, A71AV  
03-124986 03-124986 Unknown    L10V, I15V, M36I, L63S  
03-124990 03-124990 Unknown    I15V, M36I, N37D, K55KR, L63LP  
03-124994 03-124994 Unknown  D30N, I54IL, L90M N88D L10X, I13V, K14KR, N37D, L63P, A71V, I72M, V77I, I93IL  
03-124995 03-124995 Unknown    I13V, G16E, K20I, M36I, R41K, K43R, H69K, K70R, L89M  
03-124996 03-124996 Unknown    I15IV, E35D, M36MI, K55KR, I62IV, L63P, K70KR, I72IT  
03-124997 03-124997 Unknown    M36I, L63P, A71T, I72T  
03-124998 03-124998 Unknown    I15V, N37NS, L63X, H69HQ  
03-125000 03-125000 Unknown    N37S, L63P, I72V  
03-125002 03-125002 Unknown    L10V, T12I, I15V, N37D, I62V, L63H, V77I  
03-125006 03-125006 Unknown  I54L, L90M K43KT, G73T L10I, D60DE, Q61QH, L63P, I64V, I66V, A71X, I72IL, V77I, V82VI, I93IL  
03-125026 03-125026 Unknown  L90LIM  L63P, I64IM  
03-125028 03-125028 Unknown  I84IV, L90LM  L10LI, K43KR, I62V, L63P, H69HY, A71X, G73X, V77I, I93L  
03-125030 03-125030 Unknown  L90M L10LF, K20T V11VI, T12TP, I13V, I15V, Q18IL, L19Q, E35D, M36I, N37D, L63LP, I66IV, A71AT, I72IT, T74TS, V77I, V82VI, I93L  
03-125033 03-125033 Unknown    M36I, P39PS, R41K, I62IV, I64IV  
03-125044 03-125044 Unknown  M46MIL, I54V, V82A L10F, K20IT, L89LV I13V, L33V, R41K, L63LP, A71T, I72V  
03-125046 03-125046 Unknown  M46MI, L90LM  L10LI, L63PS, I64V, V82X, I93IL  
03-125052 03-125052 Unknown   Q58E L10I, K14KN, N37D, K43R, I62V, L63T, A71T, I72IT  
03-125056 03-125056 Unknown  G48GV, I54IV, V82VA, L90LM  L10LI, E35D, M36MI, N37T, R41K, I62V, L63P, A71V, T74TS, V77I, I93L  
03-125070 03-125070 Unknown  D30N, M46ML, I54L, L90M L10F, L33F, Q58E, N88D I13IV, G16GA, E35ED, M36MI, N37S, I62IV, L63P, A71X, I72IM, V77VI, I93L  
03-125072 03-125072 Unknown    I64V