Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Dilernia (2007)
Title HIV type 1 genetic diversity surveillance among newly diagnosed individuals from 2003 to 2005 in Buenos Aires, Argentina.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 283
NumPts 283
Subtype B, CRF12_BF, F, C, B + F, A, CRF45_cpx, CRF17_BF

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 283 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
F001 F001 None None   V35I, I135T, D177E, R211K, F214L, E248X, I293V, E297A, Q334L, M357T, T377M, K390R  
F002 F002 None None   T7TA, K64R, I135T, Q174H, V245K, E248X, T286A, E297K, Q334E, R356K, E370D, S379G, V381I, K390R  
F004 F004 None None   V35T, T39L, V60I, D123E, I142V, A158S, D177E, R211K, E248X, A272P, E297K, M357V, S379G, K390R  
F006 F006 None None   K22R, V35M, T39TA, D123E, I135T, I142V, F214L, D250X, A272P, K277R, K281KR, T286AP, I293V, E297K, I341V, V365I  
F008 F008 None None   I31X, V35T, Q197K, T200A, D250X, A272P, K281R, T286A, E297K, A376T, K390R R143RG 
F011 F011 None None   E6A, V35I, I135L, T200I, E248X, A272P, K281R, I293V, E297K, Q334L, A360V, A376T, T386I  
F013 F013 None None  V106I S48T, D121H, K122E, I135T, I142V, K166R, E248X, V276I, Q278H, I293V, E297A, P345Q, F346Y, G359S, K385R, T386I, K390R  
F017 F017 None None   V35T, E36Q, I135V, S162A, T200I, R211T, F214L, V245R, D250X, A272P, K277R, K281R, T286A, E297K, R358K, K390R  
F018 F018 None None  E138EG V35T, K49KR, K122E, I135V, T139TI, I142IT, S162C, E169D, K173AT, Q174K, D177X, Y183X, Y188X, E194EK, I195IK, R199X, E203EG, E204EG, Q207DE, H208HL, L209X, W212WG, T215TP, T216TP, D218X, V245Q, E248D, K249X, A272P, T286A, E291D, V292I, I293V, E297T, T338S, R356K, G359S, T377M I178IK, I180IF, V189VL, H198HQ, R211PT, F214FS 
F021 F021 None None   V35T, E40D, K49R, V60I, K102Q, E248X, D250DN, A272P, V276VI, K281KR, T286TA, I293IV, E297K, K311R, K366KR, A376T, K390R  
F022 F022 None None   I135T, K173T, Q174K, I178M, I202IV, V245T, E248X, A272P, K277KR, I293V, E297Q, A304E, V317A, Q334L, S379G, T386V, K390R F346FV 
F023 F023 None None   I31X, V35T, E36D, V60VI, K122KE, I135V, T200A, E204D, V245K, D250X, A272P, K281KR, E297K, M357T, S379G A267AV 
F024 F024 None None   K122E, V245VM, D250X, A272P, K281R, I293V, E297K, M357T, A376T, K390R  
F025 F025 None None   K11KR, D123E, I135T, I142IV, Q207L, R211K, D250X, K277KR, T286TA, I293IV, E297A, Q334R, T338S, T386I, K390R  
F026 F026 None None   K122E, D123DG, I142V, D177E, E194K, G196E, T200S, D250X, A272P, V276I, T286P, I293V, E297K Y271Y* 
F027 F027 None None   V35T, D123E, D177DN, I180V, T200TA, E248X, A272P, K281KR, I293V, E297T, K366R, A376T  
F028 F028 None None   K20KR, V35I, V60I, D177E, I178M, R211RK, F214L, V245E, D250X, A272P, T286TA, P294S, L310I, V317A, I326V, I329L, G335D, F346Y, M357T  
F030 F030 None None   V35T, E36ED, T39TIR, D123E, I135V, T165TI, I180V, D250X, A272P, K281R, T286A, E297T, K366R, A376T  
F031 F031 None None   I31X, V35T, T39L, P176K, F214L, D250X, A272P, K277KR, I293V, E297K, R356K, K366R, A376T  
F032 F032 None None   I31X, V35T, I135V, I178M, Q197K, V245R, D250X, A272P, K281R, T286A, E297K, Q334L, A376T, V381I, K385R, K390R  
F033 F033 None None   R83K, K122KE, Q197QK, T200A, E204D, D250X, A272P, T286TA, E297K, V317VA, Q334QE, G359S, A376T, K390R  
F034 F034 None None  V179D E79D, I135V, S162C, G196E, Q197H, I202IV, Q207K, R211A, V245E, D250X, K275KR, K277KR, T286TA, E297K, H315Y, I326V, Q334L, K347KR, M357IT, A360T, K366KR  
F035 F035 None None   V35I, I135C, K173E, R211A, D250X, A272P, K281R, T286P, E297R, V317VA, Q334DN, M357T, T369S, A376T Q336C 
F036 F036 None None  V108VI V35VI, V60I, R83RK, D123E, K166KR, D177E, G196E, T200TA, Q207K, R211A, E248X, K277R, T286A, E297K, S322T, R356K, A376S, K390R  
F037 F037 None None   K20R, V35I, R83K, V90I, D123E, K173R, R211K, D250X, K277R, Q278H, T286A, E297K, I329L, A360T, A376T  
F038 F038 None None   E28K, K32E, V35M, T39S, K122E, I135T, I142V, D177E, I178M, T200TA, Q207K, R211Q, V245K, E248X, D250DN, K281R, T286A, E291D, V292I, I293V, E297K, A304E, E312D, I329L, Q334HN, G335D, R356K, M357K, R358K, G359S, A360T, K366R, T377M, T386I  
F039 F039 None None   V35T, T39R, V60I, I135C, I142V, S162Y, T200E, E204D, R211K, P243T, D250X, A272P, K281R, T286A, E297K, Q334L, V365I, A376S  
F040 F040 None None   I135V, V245E, E248Q, D250X, A272P, K277R, E297K, I329L, K366KR, S379G, T386V  
F041 F041 None None   V35T, T39L, S105A, I135T, T139K, I142V, I202IV, Q207QH, R211K, F214L, E248X, I293V, Q334L, R356K, M357I, A360T, V365I, A376T, V381I, T386I  
F042 F042 None None   K102Q, K122E, S162C, I178IM, R211RK, D250X, A272P, T286A, Q334Y, R356RK, R358K  
F043 F043 None None   V35T, E36D, K49R, K122E, I135V, S162C, E169D, K173T, Q174K, Q207K, R211A, V245Q, E248X, A272P, T286A, E291D, V292I, I293V, P294PST, E297T, Q334QHR, T338S, R356K, G359S, T377M  
F044 F044 None None   K102Q, I135IR, G196GE, R211RK, D250X, Y271F, A272P, T286A, I293V, E297K, V314I, Q334E, I375V, A376T, V381VI, T386I  
F046 F046 None None   V35T, T39L, K102KR, P176PQ, V245K, D250X, A272P, K281R, T286A, E291ED, E297K, I329V, G333E, A376S, T386TI  
F050 F050 None None   K20R, V35T, V60I, D177E, R211RK, F214L, V245E, D250X, A272P, P294S, L310I, I326V, Q334PS, F346Y, M357T  
F054 F054 None None   V35VI, A158S, D250X, A272P, K275Q, V276I, Q278N, K281R, E297K, M357S, A376T, V381VI, K390R  
F055 F055 None None   I31X, V35I, I135V, I142V, D250X, A272P, K277R, K281R, T286TP, E297EK, A376T  
F057 F057 None None   I31X, V35T, K122KE, D123DN, I142IV, S162T, E169ED, Q174QR, I178IM, Q197QE, R211K, D250X, A272P, K281R, T286TA, I293IV, E297K, V365I, A376T, V381VI, K390R  
F058 F058 None None  K238T I31X, V35T, D123E, K173Q, P176Q, V179I, K201R, I202V, D250X, A272P, V276I, T286A, E297K, I375V, A376T, V381I, K390R W229C 
F059 F059 None None   K32R, K49R, I135T, R211K, V245K, D250X, K277R, T286A, P294T, E297A, K311R, I326V, A376S, T386I, K390R  
F060 F060 None None   I31X, V35T, I135V, T165I, T200I, D250X, A272P, K281R, T286A, E297K, V317A, F346L, M357MT, K366R, A376T, T386I  
F062 F062 None None  E138A V35AT, T39A, E40ED, K64R, D123E, S162C, I178M, E248D, D250X, A272P, K277R, K281KR, T286A, V292I, I293IV, E297R, V317A, D324E, K366R, A376V  
F063 F063 None None   E28A, K32Q, V35I, D123E, I135T, D177DE, V179VI, I195K, T200E, I202V, E204D, R211K, D250X, A272T, A288S, E297K, A327V, Q332QH, I341F, G359S, T369V, A371V, I375V, A376T, T386I  
F064 F064 None None   V35M, T200N, E204A, Q207D, R211K, I244V, D250X, Y271F, A272P, I293V, P294T, E297A, Q334E, A360T, S379G, T386I, K390R  
F067 F067 None None   V35M, R83K, K103R, D123E, T200A, R211K, D250X, A272P, K281R, V292I, I293V, E297K, D324DE, G333E, M357MT, K385R, K390R  
F068 F068 None None   I31X, V35I, V118I, K122E, D177N, I178M, Q197K, T200A, F214L, V245M, E248D, D250T, S251X, A272P, K281R, T286A, V292I, E297K, Q334N, G335S, M357L, K390R  
F069 F069 None None   V35T, T39AG, E53D, K122KE, I135L, I178M, R211K, D250X, A272P, E297K, G333E, Q334N, G335S, K366R, A376T, K385KR, T386I, K390R  
F070 F070 None None   P4S, V35T, I135V, T165I, D177N, R211M, F214L, D250X, A272P, K277R, I293V, E297K, D324E, Q334Y, V365I, A376T  
F072 F072 None None   V35T, T39LM, I135T, F214FL, E248X, D250DN, A272P, K277R, K281KR, E297K, G359S, V365I, A376T  
F073 F073 None None   V35T, T39X, A158S, E169D, Q174H, R211RK, E248X, D250DN, I257L, A272P, K281KR, T286P, I293V, E297K, V317A, S379SG, K385R, K390R  
F076 F076 None None   K20R, S162C, K173AT, Q174QK, D177E, T200A, Q207N, V245Q, E248X, A272P, K277R, T286A, E291D, V292I, E297A, V317A, G333E, Q334L, K390R  
F078 F078 None None   K20R, K82R, K102Q, I135T, S162C, Q197K, V245E, E248X, A272P, K277R, L283I, A288T, V292I, I293V, E297A, R358K, G359S, T386I  
F079 F079 None None   I135T, S162C, E169D, I178L, G196E, Q197K, R211K, V245T, E248X, K277R, I293V, P294Q, E297K, A304E, D324E, I329L, T386I  
F083 F083 None None   V35M, A98S, D123E, T200AE, E204D, D250X, I257L, A272P, K281R, I293V, E297K, E308ED, S379G, K390R E305V 
F085 F085 None None   V35T, D86DE, I135V, I142IV, T200TA, E204N, D250X, A272P, T286A, E297K, I329L, A376T, T377I H235HR 
F086 F086 None None   V35T, I135X, K166KR, R211G, F214L, D250X, A272P, K277R, T286A, E297K, Q334L, K366R, A376T  
F090 F090 None None   D123DE, I135T, K173DN, Q174K, G196E, R211Q, F214L, V245M, D250X, A272P, K281R, T286A, P294Q, E297K, Q334N, T338S, A376T  
F092 F092 None None   V35T, K122KE, Q197P, T200A, I202V, D250X, A272P, K281KR, T286A, E297K, V317VA, M357T, T386TI  
F099 F099 None None   K20R, K166R, K173A, D177E, T200A, I202V, Q207E, R211K, F214FL, V245Q, D250X, A272P, K277R, T286TA, E291D, V292I, I309IL, A327AV, E328D, Q334H, E344ED, P345PQ, R356RK, G359X, A360AV, K366KR, T369X, I375IV, T377TP, T386TI, K390R  
F100 F100 None None   D123E, D177E, Q197P, T200E, I202V, Q207E, D250X, A272P, K281R, V292I, E297K, K311R, I329L, I375IV, T386I  
F105 F105 None None   V35T, T39L, K122E, D123KN, I135T, S162Y, T200TA, V245E, D250X, K277R, T286A, A288S, I293V, P294T, E297K, Q334L, R356K, A376S, K390R  
F106 F106 None None   V35A, T39A, I135V, F171Y, T200I, D250X, A272P, K281R, I293IV, P294PT, E297K, A360X, A376T, T386TI  
F107 F107 None None   I47F, K102R, K122E, D123S, I135T, V179I, T200I, D250X, A272S, I293V, I329V, M357T, A376T, T386I, K390R  
F110 F110 None None   I142M, E169ED, V179I, T200A, Q207E, L228X, G231X, E248D, D250X, K277R, I293V, T296S, E297K, L301I, K311Q, V317A, M357MT, R358K, T369A, A376T, T377K  
F121 F121 None None   V35T, D123E, I178M, R211K, E248X, A272P, K281R, I293V, E297K, K366R, A376T, V381I  
F123 F123 None None  F227FL G15R, V35T, V60I, I135V, D177DE, I178M, V241VA, V245L, D250X, V261X, A272P, K281R, E297K, L325I, Q334M, M357MT, G359S, T386I, K390R  
F129 F129 None None   V35IT, V60I, V118VA, I135V, I142V, P176Q, T200A, D250X, A272P, K281R, P294Q, E297K, I326T  
F132 F132 None None  V106I I31X, V35T, T39A, K49R, S134SG, I135V, S162C, E169D, K173T, Q174K, Q207E, R211K, V245Q, E248D, K249X, A272P, K277R, T286A, E291D, V292I, I293V, E297T, S322T, Q334N, T338S, G359S, T377I, K390R  
F133 F133 None None   V35I, D123E, I135T, S162C, I178L, Q207E, R211RK, D250X, A272P, K281R, T286A, P294T, E297K, V317A, M357A, K390R  
F135 F135 None None   V35T, D123E, I135T, I178M, R211K, F214L, E248X, A272P, K281R, I293V, E297T, K366R, A376T, V381I  
F136 F136 None None   V35I, I135L, R211K, D250X, A272P, T286P, I293V, E297K, K311R, I329V, Q367L, A376T, T377L, T386I L187W, L264M 
F139 F139 None None   V35I, K49R, V60I, D123E, I135V, I142T, Q174H, I178M, G196E, I202V, Q207K, R211G, V241VA, D250X, A272P, K281R, E297K, V317A, Q334L, K390R  
F143 F143 None None   K11R, V21I, V35I, W71*, D123E, I135T, T165I, Q197K, T200L, I202V, F214L, E248X, A272P, P294T, E297K, Q334H, K366R, A376T  
F148 F148 None None   V35I, D123E, I135T, S162C, I178L, Q207E, R211RK, D250X, A272P, K281R, T286A, P294T, E297K, V317A, M357A, K390R  
F151 F151 None None  E138A K32KR, V35T, V60I, S68G, K122E, D177N, I178L, Q197K, D250X, A272P, V276VI, K277R, I293V, E297KR, A376S, T377S, K390R  
F155 F155 None None M41L E138A V35T, V60I, K122E, D123DN, I135T, D250X, A272P, K281KR, G335D, M357T, S379G, T386I  
F158 F158 None None   V35T, V60I, I135V, I142V, P176Q, T200A, D250X, A272P, K281R, P294Q, E297K, I326T K22K* 
F162 F162 None None  V179D K20R, K32N, K49R, V60I, K101Q, K122KE, I135K, E169D, D177E, G196E, T200A, V245M, E248X, A272P, K277R, I293V, P294Q, K311R, D324E, I329L, G333D, K366R, A376AS, T386I, K390R  
F163 F163 None None   V35T, T39M, V60VI, D121H, K122E, I135V, I142IV, S162C, I178IM, Q197K, Q207QE, V245M, D250X, A272P, K281R, T286A, E297K  
F168 F168 None None   K20R, I135M, V179A, T200I, D250X, A272P, A288S, I293V, P294A, E297R, K311R, M357T, A360V, A376T  
F171 F171 None None   E28A, K102Q, I135T, I178M, V179I, G196E, T200A, E204A, E248D, D250X, Y271F, A272P, I293V, P294T, E297A, A304E, V317A, Q334E, A360V, A376T, T386I  
F172 F172 None None   V35M, I135V, P243S, E248D, D250X, A272P, K277R, K281R, T286A, E297K, A376T, K390R  
F173 F173 None None   K32KR, A98S, S162C, K166R, D250X, A272P, T286A, I293V, E297K, L301I, G335D, F346N, R356K, M357T, K366KR, S379G, V381VI, K390R  
F174 F174 None None   E42EG, K49R, V60I, D121H, K122E, I142T, D250X, A272P, K277R, K281R, E291D, P294A, E297Q, R356K, M357T, K366R, A376T  
F175 F175 None None   T39A, D123E, I135T, D177E, F214L, V245M, E248D, D250T, S251X, T286A, L325I, I326V, M357T, V381I, K390R  
F176 F176 None None  V106I, K238T D123E, I135T, S162C, I178L, Q207R, R211K, V245K, D250X, A272P, K277R, E291D, I329L, G335S, M357T  
F177 F177 None None   V35T, I135T, L193F, G196R, T200A, D250X, A272P, K281R, E297K, D324DE, R358K, K366R, A376T  
F178 F178 None None   S48E, K49R, V60I, D250X, A272P, K281R, I293IV, E297K, S322T, M357T, K366R, A376T, K390R  
F182 F182 None None   K20R, V35T, V60I, K101Q, K103R, K173R, T200A, Q207H, R211G, F214L, D250X, A272P, K277Q, I293V, P294S, E297R, S322T, I329L, M357T, T369A, A376T, S379C  
F186 F186 None None   I142T, T165I, R211K, F214L, E248D, D250X, T286A, A376S, K390R  
F187 F187 None None   V35M, I135V, P243S, E248D, D250X, A272P, K281R, T286A, P294PS, E297K, S322ST, A376T  
F189 F189 None None   V35M, T39A, V60I, V118I, K122E, D123S, I135T, I142V, Q174R, G196E, R211X, F214L, V245M, D250X, A272P, K281R, V292I, E297K, V317A, I329L, V365I, K390R  
F190 F190 None None   D123E, I135T, I142T, D177E, I178M, I202V, P247X, K249R, D250K, S251Q, A272P, T286A, P294T, E297A, L325I, S379G, V381I, K385R, T386I E248~ 
F191 F191 None None   K20R, V35R, D86E, I142LM, K173KE, Q174QK, I178L, V179I, V245L, E248X, A272P, K281R, T286P, I293V, P294S, E297K, D324E, I341F, V365I, I375M, T377L, V381I, T386I, K390R  
F196 F196 None None  E138A V35T, T39M, V60I, K102Q, K122KE, I135V, R172K, I178L, T200A, E204D, E248X, A272S, K281R, P294T, E297K, I326V, I329L, T369A, A376T  
F197 F197 None None   K20R, V35I, K122E, D177E, I178L, T200A, R211T, F214L, D250X, T286A, V292I, Q334L, M357A, T377M  
F199 F199 None None   V35I, V60I, I135T, I142T, S162C, K173KR, D177DE, I178IM, R211K, D250X, A272P, K281R, I329L, M357V, A376S, K390R  
F200 F200 None None  V108I K20R, K32KE, V35T, T39A, V60I, T69X, D121H, K122E, I135T, D177E, I178L, I202V, Q207QH, R211K, V245M, D250X, A272P, K277R, T286A, I293V, E297A, I329L, F346Y, M357T, R358K, S379SG, T386I  
F202 F202 None None   T200A, Q207E, V245K, D250X, I293V, P294Q, P345T, M357I  
F203 F203 None None   I31X, V35T, V60L, K122E, D123E, I135V, Q197P, T200E, D250X, V254I, A272P, T286A, K287KR, E297R, R356K, T386I  
F207 F207 None None   V35M, V60I, R83K, D123E, I195K, G196E, R211K, D250X, A272P, E291D, E297K, Q334E, M357T  

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