Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Marconi (2008)
Title Prevalence of HIV-1 drug resistance after failure of a first highly active antiretroviral therapy regimen in KwaZulu Natal, South Africa.
Citation Clin Infect Dis
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 115
NumPts 115
Subtype C, B

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 115 Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
ICH01 ICH01 D4T, DDI, AZT, 3TC EFV D67N, K70R, M184V, T215TI, K219E K103N, Y188L S48T, A98S, K122E, D123E, K173A, D177E, I178L, T200A, E204K, Q207E, R211RK, V245Q K102T 
ICH02 ICH02 3TC, D4T EFV D67N, M184V K101E, V106M, G190A S48T, E53D, V60I, R83K, K122E, I135V, K173A, Q174R, D177E, I178L, E194Q, T200A, Q207E, R211K, V245Q  
ICH03 ICH03 D4T, AZT, 3TC NVP D67N, K70R, M184V, T215I, K219E K103N, Y181C S48T, E53D, V60I, K122E, D123G, T139R, K173A, Q174K, D177E, T200A, Q207D, R211K, V245Q  
ICH05 ICH05 AZT, 3TC EFV  K103N S48T, V60I, K122E, D123G, K166R, K173A, Q174S, D177E, T200A, Q207E, R211K, F214L, V245Q  
ICH07 ICH07 3TC, D4T NVP  Y181C S48T, V60I, K122E, D123N, I135T, K173A, Q174K, D177E, T200A, Q207E, V245Q  
ICH08 ICH08 3TC, D4T EFV   S48T, V60VI, K122E, D123G, K173A, Q174E, G196K, Q197E, T200A, Q207E, R211RK, V245Q  
ICH09 ICH09 3TC, D4T EFV   S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q  
ICH10 ICH10 3TC, D4T, AZT EFV, NVP K70KR, M184V K101E, V106M K122E, D123S, K173V, Q174K, D177E, T200A, Q207G, R211K, F214L, V245Q  
ICH11 ICH11 3TC, D4T NVP, EFV D67N, K70R, M184V, K219E K103N, G190GA S48T, V60I, K122E, D123G, K173A, D177G, T200A, I202V, Q207E, R211K, V245K  
ICH13 ICH13 D4T, AZT, 3TC EFV V75I, M184V V106M, V179D S48T, K122E, I132IL, I135V, T139K, S162C, K173A, Q174K, D177E, T200A, Q207E, R211K, F214FL, V245Q  
ICH14 ICH014 D4T, AZT, 3TC EFV M41L, V75I, M184V, T215Y V106M, V179D S48T, K103R, I132L, I135V, S162C, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q  
ICH16 ICH16 3TC, D4T EFV   S48T, V60I, K122E, D123G, K173A, Q174K, D177E, G196E, T200A, Q207E, V245Q  
ICH17 ICH17 3TC, D4T EFV M41L, D67G, K70R, M184I, T215F, K219E A98G, K103N, Y181C, G190A, K238T T69N, R83RK, D121Y, K122E, D123G, Y144YF, S162C, K173A, D177E, T200A, E203EK, Q207E, R211K, K223E, L228H, Q242X, V245Q P157PS 
ICH18 ICH18 AZT, 3TC EFV L74LV, M184V G190Q S48E, V118VI, D123E, I135IT, K173A, Q174K, D177E, I178IV, T200A, Q207E, V245Q R143RT 
ICH19 ICH19 3TC, D4T EFV D67N, K70R, M184V K101E, Y181YC, G190A S48T, V60I, K122E, D123G, K173A, D177E, T200A, Q207E, R211K, V245Q  
ICH20 ICH20 3TC, D4T EFV K70KE, M184V K103N, V108VI E40D, S48T, V60I, S68G, K122E, D123G, I135T, K173A, Q174K, D177E, T200A, Q207E, R211K  
ICH21 ICH21 AZT, 3TC EFV M184V, T215F K101E, G190C K122E, D123S, I135T, K173A, D177E, V189I, T200A, Q207E, R211K, V245Q  
ICH23 ICH23 D4T, AZT, 3TC EFV D67N, M184V, K219E K103N, G190A S48T, V60I, V90VI, K101Q, K122E, D123N, I135V, I142T, K173T, D177G, T200A, Q207A, R211K, V245Q  
ICH24 ICH24 3TC, D4T NVP M184V K103N S48T, E53D, K166R, K173I, Q174K, T200A, Q207E, R211K, V245Q  
ICH25 ICH25 3TC, D4T EFV M184V K103N, Y188L, H221HY S48T, W88S, K122E, D123S, T139A, K173I, Q174K, T200A, I202V, Q207E, F214L  
ICH26 ICH026 3TC, D4T NVP, EFV  K103KN S48T, V60I, K104KR, K122E, I135L, L149LP, S162C, K173A, D177DE, T200A, Q207E, R211RK, V245K  
ICH27 ICH027 3TC, D4T NVP, EFV K65R, T69~, K219R V106M, Y181C, G190A S48T, V60I, K122E, D123S, K173A, Q174K, D177E, I195T, T200A, Q207E, R211K, L228R, V245Q  
ICH28 ICH028 3TC, D4T EFV M184V, T215F L100I, K103N, E138R K122E, I135L, K173A, D177G, T200A, E203K, Q207D, R211K, Q242R, V245R  
ICH29 ICH029 D4T, AZT, 3TC EFV M184V K103N, V106M S48T, V60I, K122E, D123G, A158S, K173T, D177G, I178M, T200A, Q207A, R211K, V245K  
ICH30 ICH030 3TC, D4T EFV M184V V106M, V179D, M230L S48T, V60I, V118I, K122E, D123N, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q  
SW002 sw002 3TC, D4T EFV M184V K101E, Y188L K122E, D123DG, G141GR, K173T, Q174K, V179I, T200A, Q207E, R211K, V245L  
SW003 sw003 AZT, 3TC EFV   S48T, K103R, K122E, D123S, S162C, K173T, Q174K, T200A, E203D, Q207E, R211K, F214L, V245L  
SW005 sw005 3TC, D4T EFV M184V K103N, V108I D121Y, K122E, I135T, K173T, Q174K, D177E, T200E, E203EA, Q207E, R211K, V245Q  
SW006 sw006 3TC, D4T EFV   S48T, V60I, K104KR, K122E, D123G, S162A, K173A, Q174K, D177E, T200A, I202V, Q207E, D237DE, V245Q  
SW007 sw007 3TC, D4T EFV M184V V106M, V179D S48T, K122E, D123S, K173A, Q174R, D177E, G196M, T200A, Q207E, V245Q  
SW008 sw008 D4T, DDI, AZT, 3TC EFV M184V, T215Y V106M, M230L S48T, K103R, K122E, T139M, S162C, K173A, D177E, T200A, I202V, Q207E, R211K, V245Q E79EG 
SW009 sw009 3TC, D4T EFV D67N, T69D, K70R, M184V A98G, K103N, V108I K43E, S48T, V60I, K122E, D123S, I135M, K173A, Q174K, D177E, I178M, E194D, T200A, E203K, Q207E, R211Q, V245Q  
SW010 sw010 AZT, 3TC EFV D67N, K70R, M184V, T215I, K219E K103N, V108I S48T, V60I, K122E, D123S, I135T, K173A, D177E, I178M, T200E, Q207E, R211K, V245Q  
SW011 sw011 AZT, 3TC NVP D67N, K70R, M184V, T215F, K219Q K103N, E138A, Y181I S48T, K49R, V60I, K102Q, K122E, D123S, I135L, E169D, K173A, Q174K, D177E, G196E, T200A, Q207E, F214L, V245Q  
SW012 sw012 AZT, 3TC EFV M184V K103N, V108I, H221Y S48T, V60I, K122E, I135M, T165V, K173A, Q174D, D177E, T200I, Q207A, R211K, F214L, V245Q  
SW014 sw014 D4T, AZT, 3TC NVP D67N, M184V Y181C S48T, V60I, K122E, D123G, I135R, A158T, K173T, D177E, I178M, T200A, Q207K, V245Q  
SW015 sw015 D4T, DDI, AZT, 3TC NVP, EFV M184V A98G, K103N, P225H S48T, V60I, K122E, D123G, I135L, K173A, Q174K, T200A, Q207A, R211K, V245Q  
SW016 sw016 3TC, D4T NVP M184V K103N S48T, I135T, K173A, T200E, Q207E, R211K, V245E  
SW017 sw017 3TC, D4T EFV M184V K103N S48T, V60I, K101Q, K122E, D123S, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q  
SW022 sw022 D4T, DDI EFV  K103N S48T, K122E, K173A, D177G, T200A, Q207E, R211K, V241A, V245Q  
SW023 sw023 AZT, 3TC EFV M184V K103N, V108I S48T, V60I, K122E, D123S, I135T, T165TI, K173I, Q174K, D177E, T200A, Q207A, L228LR, V245Q  
SW024 sw024 AZT, 3TC NVP M184V A98G, Y181C, H221Y S48T, K49R, V60I, K122E, D123S, I142R, K173A, Q174K, D177E, I178L, T200A, I202V, Q207E, R211S, F214L, L228R, V245Q  
SW025 sw025 D4T, AZT, 3TC NVP M184V K103N, P225H S48T, V60I, D121Y, K122E, I135R, S162A, K173A, D177E, T200A, Q207D, R211K, V245Q  
SW026 sw026 D4T, DDI, 3TC NVP, EFV  K103N S48T, V60I, K122E, D123N, S162C, K173A, Q174K, D177E, I178L, G196GE, T200A, Q207E, R211K, V245Q  
SW027 sw027 3TC, D4T EFV M184V K103N, P225H S48T, V60VI, K101X, K122E, I135K, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q  
SW028 sw028 3TC, D4T EFV A62V, M184V K103N, V106M S48T, K122E, D123G, K173A, D177E, T200A, Q207E, V245Q K46KT, R72RST 
SW029 sw029 AZT, 3TC EFV D67N V106M, Y188H E44EG, S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200E, I202V, Q207E, I244V, V245Q R72RT 
SW030 sw030 3TC, D4T EFV D67DN, K70KR, L74I, V75IT, M184V, K219E A98AG, L100I, K103N, P225H S48T, V60I, K122E, D123N, I135IMT, K173A, D177E, G196K, T200A, Q207E, R211K, V245Q  
SW031 sw031 AZT, 3TC NVP M184V K101KE, G190A S48T, V60VI, D123N, T139TK, K166R, K173L, D177E, T200A, Q207E, V245K Q151QE 
SW032 sw032 AZT, 3TC EFV M184V K103S, G190GA S48T, V60I, K104R, K122E, K173A, D177E, T200AV, Q207E, R211K, V245Q  
SW033 sw033 AZT, 3TC EFV D67N, K70R, M184V, T215Y, K219E L100I, K103N, Y181YF S48T, V60I, K122E, D123S, I135L, S162D, S163T, E169A, K173A, Q174K, D177E, V179VI, G196E, T200A, E203K, Q207E, V245Q  
SW034 sw034 3TC, D4T NVP M184V Y181V S48T, V90I, K122E, D123G, I135IM, I142T, S162Y, K166R, K173I, Q174R, D177E, V179I, T200A, E204EK, Q207E, R211K, E224EA, V245Q L205L*, L210L* 
SW035 sw035 D4T, DDI, AZT, 3TC EFV, NVP M184V K101E, E138Q, G190A E40EK, S48T, V60I, K122E, D123G, I135IL, G141GE, Q145QE, K173A, D177E, T200A, E203EG, Q207AT, R211K, V245Q E42E*, Y144YS, V148VL 
SW036 sw036 3TC, D4T, AZT, DDI EFV  K103N S48T, V60I, K122E, D123X, I142V, S162SC, K166R, K173A, D177E, T200A, Q207E, R211K, V245Q R143RI 
SW037 sw037 AZT, 3TC, D4T EFV M184V V106I, Y188L S48T, K122E, D123N, I142M, S162Y, K173A, D177G, T200A, Q207D, R211K, V245Q  
SW038 sw038 3TC, D4T EFV M184V K103N, V108VI S48T, V60I, K122E, D123G, I135IT, I142V, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q  
SW039 sw039 AZT, 3TC, DDI EFV  V106M, E138A, V179D, K238T E40D, S48T, V60I, D121H, K122E, I142ST, K173A, Q174K, D177E, T200A, Q207E, F214L, V245Q  
SW040 sw040 D4T, AZT, 3TC NVP   S48T, K122E, D123S, T165TP, K173T, Q174K, I178L, T200I, Q207E, R211K, F214L, V245K W71WL, K82K*, K166GR, L193L*, L205L* 
SW041 sw041 AZT, 3TC, D4T EFV M184V K103KN, Y188YH, P225H E40X, S48T, K122E, D123S, I135IT, G141GE, K173A, D177E, I178IM, G196S, T200A, Q207E, R211K P140PQ, R143RI, L205LFI, L209L* 
SW042 SW042 D4T, DDI, AZT, 3TC EFV M184V V106M, E138A, V179VE E40R, S48T, S68G, K101Q, K102R, K104R, K122E, D123S, K173I, Q174QK, D177DE, T200A, Q207E, R211K, F214L, V245Q  
SW043 sw043 D4T, DDI, AZT, 3TC EFV M41L, A62V, M184V V106M, V179D, F227L S48T, V60I, K103R, K122E, D123S, I135V, K173V, Q174K, D177E, T200A, I202V, Q207E, F214FL, L228R, V245Q  
SW044 sw044 DDI, 3TC, D4T EFV M41L, D67N, M184V, T215Y K103N, V108I, K238T S48T, V60I, K122E, D123G, I135V, K173A, Q174K, D177E, V189I, T200A, Q207E, R211K, V245Q  
SW045 sw045 AZT, 3TC, D4T EFV   S48T, V60I, D123E, K173A, D177E, T200E, E204K, Q207A, R211K, P243T, V245Q  
SW046 sw046 3TC, D4T EFV M184V K103N, G190A, H221Y E40D, S48T, V60I, K122E, D123G, T165I, K166R, K173A, Q174K, D177E, T200A, I202V, Q207A, R211K, F214L, K219T, V245Q  
SW048 sw048 DDI, 3TC, D4T EFV M41L, M184V, T215Y K103N, V106M S48T, V60I, K102R, K122E, D123S, I135V, K166R, K173A, D177E, Q197K, T200A, Q207E, V245Q  
SW049 sw049 AZT, 3TC, D4T NVP, EFV M41L, D67N, T69D, V75M, M184V, L210W, T215Y A98G, K103N, Y181YC, G190A E44D, S48T, V60I, V118I, K122E, D123N, T139K, A158AS, S162G, K173A, Q174K, N175Y, D177E, I178M, T200A, Q207E, R211RK, D218DE, V245Q  
SW051 sw051 AZT, 3TC EFV  K103N K43R, S48T, V60I, K122E, D123S, A158S, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L  
SW052 sw052 3TC, D4T EFV D67N, T69D, K70R, M184V K101KE, K103N, G190A S48T, E53D, K122E, D123G, K166R, K173T, D177E, I178M, T200A, E203EK, Q207E, R211K  
SW053 sw053 D4T, DDI, AZT, 3TC EFV M41L, M184V, T215Y K103N, Y188L V60I, K102Q, S162C, K173A, D177E, T200A, Q207E, V245Q  
SW054 sw054 3TC, D4T EFV M41ML, M184V, T215Y A98G, K103N, H221HY, P225H S48T, V60VI, S68SG, K101KQ, I135L, K173A, D177E, I178M, T200A, E203ED, Q207A, H208HY, R211K, V245Q K49KI 
SW055 sw055 3TC, D4T, AZT, DDI EFV  V179VD S48T, K102R, D123E, K173T, Q174K, Q197P, T200A, Q207E, R211K, P243T, V245Q  
SW056 sw056 3TC, D4T EFV  K103N, G190GA S48T, V60I, T69TN, W88C, K122E, D123G, K173T, T200A, Q207D, R211K, V245E  
SW057 sw057 3TC, D4T EFV K65KR, M184MV K103S, V106M S48T, V60I, K122E, D123S, I142V, K166R, K173A, Q174A, D177E, I195L, Q197K, T200E, Q207A, R211K, F214L, D237E, V245Q  
SW058 sw058 3TC, D4T EFV M184V A98AG, K103N, P225H S48T, V60I, K122E, D123G, I135L, K173A, T200A, Q207E, R211K, V245Q  
SW059 sw059 3TC, D4T EFV   S48T, V60I, W88C, I135V, K173A, Q174K, D177E, T200A, Q207G, R211K, F214L, V245Q  
SW060 sw060 AZT, 3TC EFV M184V K103N, V108I S48T, V60I, K122E, I135T, K173A, D177E, T200A, Q207E, V245Q  
SW061 sw061 D4T, DDI EFV  V106M, Y188C S48T, K122E, D123G, S162C, K173A, Q174R, D177E, T200A, E203EK, Q207E, R211K, V245Q  
SW062 sw062 D4T, AZT, 3TC EFV M184V K103N, K238KT S48T, K102R, K122E, D123N, K173A, Q174R, D177E, T200A, Q207E, R211K, V245K  
SW063 sw063 3TC, D4T EFV D67N, M184V K101H, K103N, G190A S48T, V60I, K122E, D123S, I135T, K173A, Q174K, D177E, T200A, Q207D, R211K, V245Q  
SW064 SW064 3TC, D4T EFV   S48T, K104R, K122E, D123S, K173A, Q174K, D177E, T200A, E204D, Q207D, R211K, V245Q  
SW065 SW065 D4T, AZT, 3TC EFV  V106M, E138K S48T, K122E, I135T, K173T, Q174K, Q197P, T200A, Q207E, R211K, F214L  
SW066 SW066 3TC, D4T, AZT, DDI EFV  K103N S48T, V60I, K102Q, K122E, T165V, K173A, Q174R, D177E, T200E, I202V, Q207E, R211K, F214L, V245Q  
SW067 SW067 3TC, D4T EFV  K103N E40D, S48T, V60I, K122E, D123S, S162C, K166KR, K173A, D177E, I178IL, T200A, Q207E, R211K, V245Q V90VD 
SW068 SW068 None EFV, NVP M184V V106A, F227L S48T, V60I, K122E, D123S, K173A, Q174R, D177E, T200A, Q207E, R211K, V245E  
SW069 SW069 3TC, D4T EFV M184V V106M, V179D E40D, V60I, K122E, D123G, K173A, Q174R, T200A, I202V, Q207E, R211K, V245Q  
SW070 SW070 3TC, D4T, AZT EFV D67N, K70R V106I, E138K, V179D S48T, V60I, K103R, K122E, D123N, I135M, K173A, Q174K, D177E, T200A, Q207D, R211K, F214L, V245Q  
SW071 SW071 3TC, D4T NVP, EFV M41L, M184V, T215F A98G, Y188L S48T, V60I, K101KT, K122E, D123S, K173A, Q174K, D177E, G196E, T200A, Q207A, R211K, V245Q  
SW072 SW072 3TC, D4T EFV  K103N S48T, V60I, K122E, D123S, K166R, K173A, D177E, T200A, I202V, Q207E, R211K, V245Q  
SW073 SW073 D4T, DDI, AZT, 3TC NVP K65R, V75I, Q151M A98G, K103N, V108I V60I, S68G, K122E, D123G, I132L, K173A, Q174K, D177E, T200A, I202V, Q207E, R211K, F214L, Q242P, V245R  
SW074 SW074 3TC, D4T EFV M184V K103N, V108VI S48T, V60I, S68G, V90I, D121Y, K122E, I135T, S162Y, K173S, Q174K, D177E, I178L, V179I, G196E, T200A, Q207E, R211K, V245Q K101G 
SW075 SW075 D4T, AZT, 3TC EFV M184V K103N S48T, D121H, K122E, D123G, S162A, K173T, Q174K, D177E, T200A, Q207D, V245Q  
SW076 sw076 D4T, AZT, 3TC EFV   S48T, V60I, K122E, D123S, K173T, Q174K, D177N, V179I, T200A, I202V, Q207N, R211K, F214L  
SW077 SW077 3TC, D4T EFV D67DN, M184V K103KN, V106M, Y188YC S48T, V60I, K122E, D123S, T165L, K173A, Q174K, D177E, I178L, G196E, T200A, Q207E, Q242L, V245Q  
SW078 SW078 3TC, D4T NVP, EFV M184V K103N, V108VI S48T, V60I, K122E, D123G, K173A, Q174K, D177E, T200A, Q207E, R211K, V245K  
SW080 SW080 3TC, D4T EFV M184V V106M, V179D S48T, K102R, K103R, K122E, D123N, I167IF, K173T, D177E, T200A, Q207E, V245Q  
SW081 SW081 D4T, DDI, AZT, 3TC EFV, NVP M41L, D67N, T69D, K70R, M184V, T215F, K219Q K103N, V106M, Y188F, M230L K122E, D123N, I142V, M164L, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, L228H, V245Q Q197T 
SW082 SW082 3TC, D4T EFV, NVP M184V K103N, V106M S48T, K122E, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q M41MK 
SW083 sw083 D4T, DDI None M41L, D67N, V75VA, T215Y  E44ED, S48T, V118VI, K122E, D123G, S162Y, K173T, Q174R, D177E, T200A, E203EK, Q207E, R211K, V245Q K65KM 
SW084 SW084 D4T, DDI, AZT, 3TC EFV   S48T, K122E, D123DG, K173T, Q174K, T200A, Q207E, R211K, F214FL, V245Q  
SW085 SW085 3TC, D4T EFV M184V V179D, Y188L S48T, K122E, D123G, A158AT, T165I, K173A, D177E, T200A, Q207A, R211K, V245Q  

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