Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Eyer-Silva (2007)
Title Autochthonous horizontal transmission of a CRF02_AG strain revealed by a human immunodeficiency virus type 1 diversity survey in a small city in inner state of Rio de Janeiro, Southeast Brazil.
Citation Mem Ins Oswaldo Cruz
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 94
NumPts 94
Subtype B, F, B + F, CRF12_BF, CRF02_AG, CRF40_BF, D

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
BRSAP01 04BRSAP01 LPV 13   I13V, G17D, E35D, R57K, D60E, L63P, A71V, I72V, I93L  
BRSAP02 04BRSAP02 NFV, RTV, IDV, LPV  I54V, V82A L24I L10I, I13V, G17D, K20M, E35D, M36I, K55R, R57K, D60E, I62V, L63P  
BRSAP03 04BRSAP03 IDV    I13V, I15V, N37S  
BRSAP04 04BRSAP04 IDV    G17D, R57K, D60E, L63P  
BRSAP05 04BRSAP05 None    G17D, L63S, K70R, I72T, V77I, L89F  
BRSAP06 04BRSAP06 None    I15V, Q18K, E35D, M36I, N37D, I64V  
BRSAP07 04BRSAP07 LPV 22   I15V, E35D, M36I, N37D, R41K, R57K, Q61N, L63V, I64M, L89M  
BRSAP08 04BRSAP08 RTV, IDV    N37S, L63T, V77I  
BRSAP09 05BRSAP09 None    L10V, M36I, N37E, R57K, Q61N, L63T, E65D, I72MV T12H 
BRSAP09_PED 05BRSAP09P None    L10V, K20R, M36I, N37E, R57K, Q61N, L63A, I72M  
BRSAP10 05BRSAP10 None    N37S, R57RK, Q61QH, L63LP, I72IM  
BRSAP13 04BRSAP13 None    I15V, K20R, E35D, M36I, R41K, R57K, Q61N, L63V, I72T, L89M  
BRSAP18 04BRSAP18 RTV, IDV    L10V, G17D, R57K, D60E, L63P  
BRSAP23 05BRSAP23 NFV 79   T12N, M36I, N37E, R57K, Q61N, L63H, I72M  
BRSAP24 04BRSAP24 None    I13V, G17D, R57K, D60E, L63P  
BRSAP25 04BRSAP25 None    I13V, G17D, R57K, D60E, L63P  
BRSAP26 05BRSAP26 None    R57K, L63P, E65D  
BRSAP27 05BRSAP27 None    L10V, T12N, N37E, L63P, A71T, V77I, P79S  
BRSAP28 05BRSAP28 None    R57K, L63P, E65D, K70R  
BRSAP29 06BRSAP29 None    L10V, N37E, L63S  
BRSAP30 06BRSAP30 None    R41K, I62V, L63T, I64M, E65D, I72T  
BRSAP31 06BRSAP31 None    R57K, L63P, E65D, K70R  
BRSAP33 06BRSAP33 None    R57K, L63P, E65D, K70R  
BRSQ01 04BRSQ01 None    R41K, D60E, I64V  
BRSQ02 04BRSQ02 None    T12A, L19I, L63S, I64V  
BRSQ03 04BRSQ03 None    N37S  
BRSQ05 05BRSQ05 None    I15V, E35D, M36I, R41K, R57K, Q61N, L63C, V77I, V82I, L89M, I93L  
BRSQ06 04BRSQ06 LPV   L33F L10I, I13V, L63I, V77I, L89M  
BRSQ07 04BRSQ07 None    E35D, N37D, R57K, L63P, I64V, C67S  
BRSQ08 06BRSQ08 None    I15V, G17D, L63T, I64V, E65D  
BRSQ09 04BRSQ09 None    R41K, L63P, I64L, I72V, V77I, I93L  
BRSQ12 05BRSQ12 None    I13V, L63P  
BRSQ14 05BRSQ14 NFV 209 D30N L33F, N88D I15V, G17D, E35D, M36V, D60E, I62V, L63P, A71T, I72T  
BRSQ15 05BRSQ15 None    R57K, L63P  
BRSQ20 04BRSQ20 RTV, IDV    G16E, R41K, R57K, I62V, V77I, I93L  
BRSQ21 05BRSQ21 None    I13V, N37S, I62V, I64V, E65D  
BRSQ24 05BRSQ24 IDV    I13V, M36I, N37D, R41K, I64V  
BRSQ25 04BRSQ25 None    I13V  
BRSQ26 06BRSQ26 None    L10I, I13V, L33V, N37S, L63C, I64V, C67D  
BRSQ27 06BRSQ27 None    I15V, E35D, N37T, P39S, R41K, D60E, Q61E, L63P, A71V, I72V, I93L  
BRSQ29 06BRSQ29 LPV    M36I, R41K, D60E, Q61E, I62V, I64V  
BRSQ30 04BRSQ30 None    T12A, I13V, K14R, N37S, R41K, I62V, L63P  
BRSQ31 05BRSQ31 None    E35D, N37S, R41K, R57K, L63P, E65D, K70R  
BRSQ32 04BRSQ32 LPV 52   E35D, I62V, L63P  
BRSQ32a 05BRSQ32 None    G17D, L63P  
BRSQ33 05BRSQ33 NFV    L19Q, N37S, H69Y  
BRSQ35 06BRSQ35 None    T12S, I15V, E35D, M36I, R41K, R57K, D60E, Q61D  
BRSQ36 05BRSQ36 None    I13V, M36I, N37S, I62V, I64V  
BRSQ39 04BRSQ39 IDV, LPV    I15V, K20R, E35D, M36I, N37D, R41K, R57K, Q61N, L63V, E65D, I72T  
BRSQ40 04BRSQ40 None    I15V, G17D, L63T, I64V, E65D  
BRSQ41 04BRSQ41 None    L63P, K70T, I72T  
BRSQ42 05BRSQ42 None    K14R, I15V, E35D, M36I, R41K, R57K, Q61D, H69Q, L89M  
BRSQ43 05BRSQ43 None   K43T L19V, N37S, R41K, L63T, A71T, I72V, V77I, I93L  
BRSQ44 05BRSQ44 None    I15V, K20R, E35D, M36I, R41K, R57K, Q61N, L63C, E65D, I72T  
BRSQ46 04BRSQ46 None    T12K, I15V, E35D, M36I, R41K, R57K, Q61E, L63P, E65D  
BRSQ47 04BRSQ47 None    N37C, L63C, V77I, L89F, I93L  
BRSQ48 04BRSQ48 LPV 35   K14R, G17E, N37S, L63C, V77I, L89F, I93L  
BRSQ49 06BRSQ49 None    I13V, I15V, N37S, R41K, I62V, L63P, I64V  
BRSQ50 04BRSQ50 None    P1L, I3F, R41K  
BRSQ53 05BRSQ53 NFV 157   I13V, R41K, D60E, L63P  
BRSQ54 04BRSQ54 None    T12A, I15V, E35D, M36I, R41K, L63T, I72V  
BRSQ56 04BRSQ56 None    I13V, N37S, R41K, L63P, V77I  
BRSQ57 04BRSQ57 None    I13V, I15V, E35D, N37S, I64V, V77I  
BRSQ58 04BRSQ58 None    I62V, L63S, A71T, V77I  
BRSQ60 05BRSQ60 None    K14R, I15V, N37D, L63A, I72V, V77I  
BRSQ61 04BRSQ61 None    G17E, Q18H, N37S, L63C, L89F, I93L  
BRSQ65 05BRSQ65 None    L63P, V77I, I93L  
BRSQ66 05BRSQ66 None    I13V, M36I, N37S, I62V, L63P, I72E  
BRSQ67 05BRSQ67 None    L10I, I13V, I15V, G16E, L63T, C67E  
BRSQ68 05BRSQ68 None    I15V, E35D, L63P  
BRSQ69 05BRSQ69 None    K14R, I15V, L19I, E35D, M36I, R41K, R57K, Q61N, L63C, V77I, V82I, L89M, I93L  
BRSQ70 05BRSQ70 LPV 52   L33I, N37T, K45R, L63P, I64V, I93L  
BRSQ71 05BRSQ71 None    M36I, Q61E, L63P, H69Q  
BRSQ72 05BRSQ72 None    I15V, L19I, E35D, R41K, D60E, L63P, V77I  
BRSQ73 05BRSQ73 None    I15V, L19I, M36I, R41K  
BRSQ74 05BRSQ74 None    E35D, I64V, I93L  
BRSQ75 05BRSQ75 None    N37C, I62V, L63P, V77I  
BRSQ76 05BRSQ76 None    I13V, K14R, G17E, I62V, L63P  
BRSQ77 05BRSQ77 None    I15V, N37A, L63P, H69Q, I72V  
BRSQ78 05BRSQ78 None    R41K, D60E, I64V  
BRSQ80 05BRSQ80 None    E35D, N37Q, L63S, I64V  
BRSQ81 06BRSQ81 None    K14R, G17E, N37S, L63C, V77I, L89F, I93L  
BRSQ82 05BRSQ82 None    K14R, G17E, N37S, L63C, V77I, L89F, I93L  
BRSQ83 05BRSQ83 None    L10V  
BRSQ84 05BRSQ84 None    R41K, I64V  
BRSQ86 06BRSQ86 None    I13V, R41K, I64V, V77I  
BRSQ87 06BRSQ87 None    I15V, M36I, K43R, I62V, L63S  
BRSQ88 06BRSQ88 None    L10V, I13V, G16E, L19I, M36I, N37S, R41K, H69K, K70R, L89M  
BRSQ89 06BRSQ89 None    L10V, I15V, G16E, E35D, M36I, R41K, D60E, I62V, L63V, H69K, I72K  
BRSQ90 06BRSQ90 None    I13V, I15L, L19I, K20I, M36I, R41K, H69K, K70R, L89M  
BRSQ91 06BRSQ91 None    L10I, K14R, G17E, N37S, L63C, L89F, I93L  
BRSQ92 06BRSQ92 None    I15V, K20R, E35D, M36I, R41K, R57K, Q61D, H69Y, I72T, L89M  
BRSQ93 06BRSQ93 None    I13V, L19I, N37S, Q61E, L63P, Q92K  
BRSQ94 06BRSQ94 None    K43R, L63P, V77I, I93L  

Database

Resources

Team