Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Ojesina (2007)
Title Characterization of HIV type 1 reverse transcriptase mutations in infants infected by mothers who received peripartum nevirapine prophylaxis in Jos, Nigeria.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 14
NumPts 14
Subtype CRF02_AG, G, D, CRF06_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
NVJ414 NVJ414 None NVP   V35T, E53D, I135V, I142V, S162A, K173T, Q174N, D177E, T200A, Q207E, F214L, V245Q, E248D, V276I, Q278N, T286A, E291D, V292I, I293V, P294T, D320N, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375V, A376T, K390R, A400T, T403M, V435A, A437V S322M 
NVJ437 NVJ437 None NVP   V35T, V60I, D121H, K122E, I135T, D177E, I178V, V179I, T200A, Q207E, R211K, F214L, V245T, D250E, A272P, T286A, E297K, I329V, G335D, R356K, M357S, Q373H, T377Q, S379C, K390R, E399G, V417I, K431E, E432D  
NVJ438 NVJ438 None NVP   E28K, K32E, V35T, G45E, S162A, K173I, Q174K, D177E, I178V, T200A, Q207R, R211K, V245K, A272P, K275R, Q278N, T286A, E291D, V292I, I293V, P294Q, S322T, I326V, G335D, R356K, M357Q, R358G, G359S, A371V, I375V, K390R, T403M, E432D Y56H, A267V, E370R 
NVJ441 NVJ441 None NVP  Y181C V35T, E36D, K122E, D123N, I135V, S162A, S163G, K173T, Q174K, D177E, T200A, Q207E, R211K, E224G, K238E, V245E, E248D, V276I, T286A, E291D, V292I, I293V, P294T, K311R, S322T, I326V, G335D, R356K, M357K, G359S, A371V, I375V, A376T, K390R, T403M, E432D, V435A  
NVJ448 NVJ448 None NVP   V35T, E36D, I50V, V60I, K122E, D123S, K173T, Q174K, D177E, I178M, G196E, T200A, Q207D, P243S, V245Q, E248N, D250E, A272S, R284K, T286A, E291D, V292I, I293V, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, K366R, T377R, V381I, T386V, Q394R, A400V, E413D, K431T, V435P, F440Y  
NVJ575 NVJ575 None NVP   V35T, E36D, K49R, D113N, S162A, K173I, Q174K, D177E, T200V, Q207E, R211K, V245K, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, R358K, G359S, K366R, A371V, I375V, A376S, K390R, A400T, T403M, E432D, V435A  
NVJ620 NVJ620 None NVP   V35T, V60I, I135V, S162A, K173T, Q174K, D177E, Q197E, T200A, Q207E, P243T, V245Q, K281R, T286A, E291D, V292I, I293V, P294T, R307K, S322A, G335D, R356K, M357K, G359S, K366R, T369A, E370Q, A371V, I375V, A376S, K390R, K395R, T403M, E432D, V435I  
NVJ692 NVJ692 None NVP   V35T, T39M, V60I, K64R, K122E, D123N, I135V, I142V, S162A, K173S, Q174K, N175Y, D177E, T200A, Q207A, R211E, V245T, E248D, S251H, I274L, T286A, E291D, V292I, I293V, P294T, E297K, E312D, I326V, G335D, M357R, G359S, K366R, T369V, A371V, I375V, A376V, K390R, T403M, E432D, V435I  
NVJ702 NVJ702 None NVP   V35T, E40D, V60I, K101R, D121H, K122E, K166R, K173T, Q174E, D177E, I178L, T200A, Q207N, V245Q, E248D, D250E, S251D, A272P, K277R, T286A, E291D, V292I, I293V, E297K, E298G, D324E, I329V, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, Q394R, A400V, Q428R, K431T, V435P, F440Y L422P 
NVJ734 NVJ734 None NVP   E28G, V35T, T39A, E40D, K122E, D123T, I135T, I142V, S162A, K173S, Q174K, D177E, V179I, I180V, Q207A, V245Q, E248N, K281R, T286A, E291D, V292I, I293V, P294T, V317A, S322T, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375V, A376V, V381I, T386A, T403I, E432D, V435T, G436E  
NVJ748 NVJ748 None NVP   V35T, V60I, K122E, D123S, T139I, G141E, K166R, K173T, Q174K, D177E, I178M, G196E, T200A, Q207N, R211K, V245Q, E248D, K249E, D250E, S251N, A272P, T286A, E291D, V292I, I293V, E297K, D324E, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, S379G, T386V, Q394R, E399D, A400V, E413D, Q428R, K431T, V435P L80F 
NVJ774 NVJ774 None NVP   V35T, V60I, K122E, D123S, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207N, V245Q, E248D, D250E, A272P, T286V, E291D, V292I, I293V, I326V, Q334L, G335D, F346H, M357R, R358G, G359S, A360V, T386V, Q394R, A400V, K431T, V435P, F440Y  
NVJ782 NVJ782 None NVP  V179E V21I, K32I, V35T, T39K, V60I, I63V, K122E, D123N, I135K, K173R, Q174K, D177E, E194D, T200A, Q207A, R211K, Q222R, V245Q, D250E, A272P, T286A, V292I, I293V, E297T, Q334K, G335N, T338I, F346H, R356K, M357V, R358K, G359S, A376S, T377M, K385R, T386I, K388R, K390R, A400I, Q428R, K431T, V435A Y115C, L234H, Y319C 
NVJ804 NVJ804 Unknown Unknown  K101E V35T, V60I, K104R, K122E, D123S, K173T, Q174K, D177E, I178M, G196E, T200A, Q207N, R211K, V245Q, E248D, D250E, S251N, A272P, T286A, E291D, V292I, I293V, E297K, R307K, D324E, I329V, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, S379G, T386V, Q394R, E399D, A400V, Q428R, K431T, V435S, F440Y  

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