Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Yamaguchi (2002)
Title Evaluation of HIV type 1 group O isolates: Identification of five phylogenetic clusters.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup O
SelectedType Clinical
NumIsolates 37
NumPts 37
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
193Ha 193Ha None    D3E, K7Q, E11D, R20K, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, K211T, T218L, Q221R, N222K, L234I, K240Q, N254K, S255G, D278T, C280S, R284G, D288S D41P, D207Q, D286T 
341Ha 341Ha None    D3E, K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, L68V, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163E, K173R, I182V, F185Y, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, D288S D41P, D207Q, D286T 
96CMA102 96CMA102 None   T97A D3E, K7Q, E11D, M22L, D25E, N27G, V31I, V37I, S39N, Q44H, L45I, G59E, I60V, L63M, L68A, I72V, L74I, Y83F, G106A, V110I, T112I, I113L, S119P, T124A, V126M, G134N, Q137H, S153A, K160S, G163Q, K173R, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D270H, D278A, C280S, V281VM, R284G, D288S D41P, D207Q, D286AT 
96CMABB009 96CMABB009 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, M50I, G59E, I60V, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, S153A, K160S, I182V, G193R, S195T, I200L, V201I, I204L, T206S, K211T, T218S, L234I, K240Q, N254K, S255G, D278T, V281M, R284G, D288S D41P, D207Q, D286T 
96CMABB637 96CMABB637 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50I, C56Y, G59E, L63M, I72V, L74I, Y83F, G106A, V110I, K111R, T112V, I113L, S119P, T124A, V126M, G134N, K136R, Q137H, S153A, K160S, G163Q, I182V, Y194C, S195T, I200L, V201I, I203M, I204L, T206S, K211T, Q216H, T218L, N222K, R224Q, L234I, K240Q, N254K, S255G, I268L, D278A, C280S, V281M, R284G, D288S D41P, D207Q, D286T 
97CMABB447 97CMABB447 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45T, M50I, C56Y, G59E, L63M, I72V, L74I, Y83F, G106AS, V110I, T112I, I113L, S119P, T124A, V126M, G134N, Q137H, S153A, K160S, G163Q, I182V, Y194C, S195T, I200L, V201I, I203M, I204L, T206S, K211T, T218L, N222K, L234I, K240Q, N254K, S255G, I268L, D278A, C280S, V281M, R284G, D288S D41P, D207Q, D270C, D286T 
97CMABB497 97CMABB497 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63M, L68V, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, N222K, L234I, K240Q, N254K, S255G, I268L, D278T, C280S, V281M, R284G, D286A, D288S D41P, D207Q 
97US08692A 97US08692A None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, L68V, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, D288S D41P, D207H, D286T 
98CMA104 98CMA104 None    D3E, K7Q, E11D, N18NH, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63M, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, G134N, Q137H, S153A, K160S, G163E, K173R, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D270H, D278A, C280S, V281M, R284G, D288S D41P, K136K*, D207Q, D286T 
98CMA105 98CMA105 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, G59E, I60V, L63M, L74I, Y83F, G106A, T112I, I113L, S119P, T124A, V126M, G134N, K136Q, Q137H, S153A, K160S, K173R, I182V, F185Y, S195T, V201I, I204L, I208L, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, R284G, D288S D41P, D207Q, D286T 
98CMABB141 98CMABB141 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, G59E, I60V, L63I, L68V, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218S, L234I, K240Q, N254Q, S255G, D278T, C280S, V281M, D288S D41P, D207H, D286T 
98CMABB197 98CMABB197 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, K46R, M50I, G59E, I60V, L63M, L74I, Y83F, Y99H, G106A, T112V, I113L, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278AT, C280S, V281M, R284G, D288G D41P, D207H, D286T 
98CMABB212 98CMABB212 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50T, G59E, L63M, L74I, Y83F, T93S, G106A, T112V, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, E157N, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278N, C280S, V281M, D288S D41P, D207Q, D286T 
98CMU2901 98CMU2901 None    D3E, K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D256E, D270H, D278A, C280S, V281M, R284RG, D288S D41P, D207Q, T218F, D286T 
98CMU5337 98CMU5337 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50T, C56Y, G59E, I60V, L63I, L74I, Y83F, T93S, G106A, T112I, S119P, T124A, T125I, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, I191L, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, K273KQ, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D278P, D286T 
99CMU4122 99CMU4122 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63I, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234T, K240Q, N254K, S255G, D270N, D278T, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286AT 
99USTWLA 99USTWLA None  G118R, G140GR  D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, G47E, A49P, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G, D288S W19W*, D41P, G52GS, G149GE, D207Q, D286T 
ABT2156 ABT2156 None   T97A D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, L68V, I72V, L74I, Y83F, G106A, V110I, T112V, I113L, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163E, K173R, I182V, F185Y, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, C280S, V281M, D288S D41P, D207Q, D278I, D286T 
MA010 98CMA010 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, K42Q, Q44H, L45I, M50I, G59E, I60V, L63I, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286T 
MA100 98CMA100 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, L68V, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, D288S D41P, D207H, D286T 
MA103 98CMA103 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, A49P, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D256E, D278NT, V281M, R284G, D288S D41P, D207Q, D286T 
MA108 99CMA108 None    D3E, K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, L68AT, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270N, D278T, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286T 
MA119 99CMA119 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, S39N, Q44H, L45T, M50I, G59E, I60V, L63I, L68A, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286T 
MA120 99CMA120 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50T, C56Y, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278N, C280S, V281M, D288S D41P, D207Q, D286T 
MA121 99CMA121 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50I, G59E, L63I, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163E, K173R, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218I, R224Q, L234I, K240Q, N254K, S255G, D270N, D278T, D288S D41P, D207Q, D286T 
MA122 99CMA122 None    D3E, K7Q, E11D, M22L, D25E, N27G, V31I, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63M, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, G134N, S153A, K160S, G163Q, K173R, S195T, I200L, V201I, I204L, T206S, K211T, T218L, R224Q, L234I, K240Q, N254K, S255G, D270H, D278A, C280S, V281M, R284G, D288S D41P, D207Q, D286T 
MA123 98CMA123 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, N222K, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G, D288S D41P, N117S, V165A, D207Q, D286T 
MA124 98CMA124 None    D3E, K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63M, I72V, L74I, Y83F, G106A, T112IV, S119P, T124A, V126M, G134D, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, D288S D41P, D207H, D286T 
MA304 99CMA304 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, L74I, Y83F, G106A, K111KR, T112V, S119T, T124A, V126M, Q137H, I141IV, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, R284G, D288G D41P, D207H, D286T 
MA307 98CMA307 None    D3E, K7Q, E11D, M22L, N27G, P30A, V37I, Q44H, L45T, C56Y, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, M275V, D278A, C280S, V281M, D288S D41P, D207Q, D286T 
MA323 98CMA323 None    D3E, K7Q, E11D, M22L, N27G, V37I, L45I, M50I, C56Y, G59E, I60V, L63I, L68V, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160T, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286T 
MA376 98CMA376 None    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, M50I, C56Y, G59E, L63M, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, G193R, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278A, V281M, D288S D41P, D207Q, C280N, D286T 
MA407 98CMA407 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63I, I72V, L74I, Y83F, A91T, G106A, T112V, S119P, T124A, V126M, A133T, G134N, I135V, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, T210TI, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, D278N, C280S, V281M, R284G, D288S D41P, D207Q, T218F, D286T 
MA453 98CMA453 None    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, L74I, Y83F, G106A, T112V, S119P, T122I, T124A, T125A, V126M, A133T, G134N, K136KQ, Q137H, S153A, K160S, G163EQ, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, D288S D41P, D207H, D286T 
MEB005 96CMEB005 None    D3E, E11D, M22L, N27G, V37I, Q44H, L45I, I60V, L63M, I72V, L74I, Y83F, G106A, K111KR, S119P, T125A, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, Y194C, S195T, I200L, V201I, I204L, T206S, K211T, T218L, N222K, R224Q, L234I, K240Q, N254K, S255G, R269RK, D270H, D278T, V281M, R284G, D288S D41P, G59EK, D207Q, D286AT 
MU4673 99CMU4673 None   T97A D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45IT, K46R, A49P, G59E, L63M, L74I, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G, D288S D41P, D207Q, D286T 
MU4970 98CMU4970 None    D3E, K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50T, C56Y, G59E, I60V, L63I, I72V, L74I, Y83F, A91T, G106A, T112V, S119P, T124A, T125I, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, I191L, S195T, V201I, I204L, T206S, K211T, N222K, R224Q, L234I, K240Q, N254K, S255G, D270H, C280S, R284G, D288S D41P, D207Q, T218F, D278P, D286T 

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