Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Tee (2005)
Title The evolving molecular epidemiology of HIV type 1 among injecting drug users (IDUs) in Malaysia.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 36
NumPts 36
Subtype B, CRF33_01B, CRF01_AE, B + CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
MYIDU10 04MYIDU10 None None   K122E, D123S, I135R, K166R, K173I, Q174K, D177E, I178M, Q207N, R211K, K238R, V245E  
MYIDU12 04MYIDU12 None None   T27P, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, T200R, Q207D, K238R, V245E  
MYIDU18 04MYIDU18 None None   K20R, I135V, S162C, R211G, V245K  
MYIDU19 04MYIDU19 None None   K32N, K122E, D123N, I135R, K173I, Q174K, D177E, E203D, Q207A, R211N, V245E  
MYIDU20 04MYIDU20 None None   K122E, D123S, I135R, S162C, K173T, Q174K, D177E, T200A, Q207A, R211S, K238R, V245E  
MYIDU23 04MYIDU23 None None   E44G, D123E, I135V, S162C, V189I, T200I, V245M  
MYIDU24 04MYIDU24 None None   K20R, V35T, T39K, K43E, D123S, T165I, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, K249R  
MYIDU25 04MYIDU25 None None   K20R, T39A, R83K, D86E, S162C, I195T, V245M  
MYIDU26 04MYIDU26 None None   V35I, K122E, D123S, I135R, K173I, Q174K, D177E, I178M, Q207A, R211N, K238R, V245E  
MYIDU27 04MYIDU27 None None  E138A S134N, I135V, S162C, V245I  
MYIDU8 04MYIDU8 None None   W88C, I135V, S162C, R211T  
MYIDU9 04MYIDU9 None None   I135V, S162C, V189I, I195V, T200I, R211E, V245M  
MYIDUA10 04MYIDUA10 None None   E6D, K102Q, S162C, N175NH, T200A, Q207QE, T240TS, V245K  
MYIDUA11 04MYIDUA11 None None   I135V, S162C, T200A, V245R, K249T  
MYIDUA12 04MYIDUA12 None None   E6D, I135V, S162C, Q174L, Q207E  
MYIDUA14 04MYIDUA14 None None  V106VI I50IV, T107S, K122E, S162C, T200TIM, T240TS, K249T  
MYIDUA2 04MYIDUA2 None None   I135L, I142L, S162CY, T200A, V245M, K249T  
MYIDUA3 04MYIDUA3 None None   V35I, K122E, D123S, K173T, Q174R, D177E, Q207A, R211N, K238R, V245E H96HR 
MYIDUA5 04MYIDUA5 None None   T39TI, D123E, I135IT, S162C, D177E, K249T  
MYIDUA6 04MYIDUA6 None None   K122E, D123N, I135R, K173IT, Q174K, D177E, I178M, I202V, Q207A, R211N, V245E  
MYIDUA7 04MYIDUA7 None None   V60I, K122E, D123S, K173M, Q174K, D177E, R206RK, Q207E, R211K, K238R, V245E  
MYIDUA8 04MYIDUA8 None None   I135V, S162C, T200I, T240TS, V245M, K249T  
MYIDUB11 04MYIDUB11 None None   T27S, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, Q207T, R211N, K238R, V245K  
MYIDUB8 04MYIDUB8 None None   V35I, K122E, D123S, I135K, K173I, Q174K, D177E, I195IL, Q207A, R211N, K238R, V245E  
MYIDUC1 04MYIDUC1 None None   T39A, E40EK, D121Y, K122E, I135L, S162C  
MYIDUC10 04MYIDUC10 None None   E6D, K20R, V35L, K122E, S162C, E203D, R211K, I244V  
MYIDUC2 04MYIDUC2 None None   V35I, K122E, D123S, K173IMR, Q174K, D177E, E203D, Q207A, R211N, K238R, V245E  
MYIDUC22 04MYIDUC22 None None   V60I, S68G, K122E, D123S, I135R, T165I, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E  
MYIDUC3 04MYIDUC3 None None   K122E, D123S, I135R, K173I, Q174K, D177E, I178M, V179I, K201KQ, Q207A, R211N, K238R, V245E  
MYIDUC4 04MYIDUC4 None None   K122E, D123S, K173I, Q174K, D177E, V179VI, Q207A, R211KN, K238R, V245E  
MYIDUC5 04MYIDUC5 None None  V106VI V60VI, T107S, K122E, D123DN, I135V, S162C, E248D  
MYIDUC9 04MYIDUC9 None None   K32N, K122E, D123S, I135R, S162C, K173R, Q174K, D177E, V179I, I202V, Q207A, R211N, K238R, V245E  
MYIDUD19 04MYIDUD19 None None   K122E, D123N, K173I, Q174K, D177E, Q207A, R211N, K238R, V245E  
MYIDUD2 04MYIDUD2 None None   K20KR, K122E, D123S, I135T, T165I, K173I, Q174K, D177E, T200A, Q207A, R211N, K238R, V245E  
MYIDUD5 04MYIDUD5 None None   V111I, K122E, I135V, T200A, F214L, V245K  
MYIDUD8 04MYIDUD8 None None   I135V, S162C, V245K  

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