Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Burns (2002)
Title Sequence variability of the integrase protein from a diverse collection of HIV type 1 isolates representing several subtypes.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 18
NumPts 18
Subtype A, B, C, D, CRF01_AE, CRF10_CD

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
92BR014 92BR014 None    V31I, I72V, T124A, V151I  
92BR018_B 92BR018_B None    S39C, I72V, T124N, V201I, L234I  
92BR023 92BR023 None    V32I, L101I, K111Q, T112V, T124N, K136Q, V201I, K211R, T218I, L234I, I251L, R269K  
92BR025 92BR025 None    D6N, D25E, V31I, M50T, L101I, T112V, T122I, T124N, K136Q, V201I, T218M, L234I, I251L, A265V, R269K  
92BR028 92BR028 None    T206S, D256E  
92RW008_c 92RW008_c None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, K173R, S195T, V201I, K211R, T218I, L234I  
92UG001 92UG001 None    S17N, I72V, L101I, T112V, I113V, T124S, T125A, G193E, V201I, K211T, E212K, T218I, L234I, I251L, A265V  
92UG035 92UG035 None    S17N, I60M, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, T218I, L234I, D256E  
93RW004 93RW004 None    K14R, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I  
93RW024 93RW024 None    K14R, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I, A265V K173KN 
93RW028 93RW028 None    E11D, A21T, V31I, T97S, T112V, I113V, T124A, T125A, V126F, I135V, K136Q, D167E, V201I, L234I  
B0412 B0412 None    S17N, M50L, I72V, I84M, K111R, T112V, I113M, T124A, T125A, V201I, I203M, T218I, L234I, A265V, R269K  
B102 B102 None    E11D, K14R, A21T, V31I, S57SR, I72V, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, L234I  
B1583 B1583 None    S17N, V31I, I72V, L101I, T112A, S119P, T122I, T124A, T125S, V201I, D256E  
M002 M002 None    K14R, S17N, V31I, S39C, I72V, L101I, T112V, T124N, K136Q, V201I, K219N, N222K, L234I  
M539 M539 None    K14R, T112V, I113V, T124A, T125A, K136Q, D167E, V201I I72ILV 
MB462 MB462 None   T97A S24H, V31I, I72V, L101I, T112V, S119P, T122I, T125P, I135V, F181L, G193D, V201I, K215R, L234I, N254K, S255G, A265V, R269K  
Q850 Q850 None    E11D, K14R, A21T, V31I, I72V, T112V, S119P, T125A, K136Q, D167E, V201I, I208M, L234I