Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Sierra (2004)
Title The analysis of near full-length genome sequences of human immunodeficiency virus type 1 BF intersubtype recombinant viruses from Chile, Venezuela and Spain reveals their relationship to diverse lineages of recombinant viruses related to CRF12_BF.
Citation Infect Genet Evol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype F, B

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
CH12 CH12 None  R263RK G163R E11D, V31I, V32I, V37I, M50I, I72V, I84L, P90S, F100FL, L101I, S119P, T124A, T125A, G134D, K136Q, V201I, K211R, T218I, I220IF, R224RW, L234V, K240R, D256E T66TP, N117NK, W132WG, N254NI 
CH3 CH3 Unknown    S17N, R20K, L28I, S39N, L45V, I72V, T112R, K156N, V165I, K173R, V201I, E212A, T218I, L234V, D256E, S283G  
CH6 CH6 Unknown    S17N, A23V, L28I, S39N, L45V, T112R, T124TA, T125A, K156N, V165I, V201I, L234V, D256E, S283G  
R140 R140 None    E10D, I72V, I84L, L101I, S119P, T124A, T125A, K136Q, H171Y, V201I, A205S, K211R, T218I, L234V, D256E, S283G  
V62 V62 None    I72V, T124A, M154I, V165I, F185Y, R187K, S283G  
X1241 X1241 None   G163K S17N, I72V, I84L, L101I, S119T, T122S, T124A, T125A, K136Q, D167E, V201I, T218I, L234V, D253E, D256E