Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Harris (2003)
Title A cluster of HIV type 1 subtype C sequences from Ethiopia, observed in full genome analysis, is not sustained in subgenomic regions.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype C, Unknown


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
99ET1 99ET1 None None   V8I, V35T, E36A, T39E, E40D, K43R, K122E, D123N, I135T, K173A, D177E, T200A, I202V, Q207G, P243T, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294A, Q334H, G335D, R356K, M357R, G359T, T377M, K390R, A400T, E404D, L452I, R461K, T470N, D471E, H483Q, L491S, E514D, L517I, S519N, K530R, A534S, A554K  
99ET14 99ET14 None None   E28K, K32E, V35T, E36A, T39E, S48T, K122E, D123G, K173A, D177E, I178L, T200A, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377M, S379G, T386V, K390R, A400T, E404D, E413D, V435A, A437V, L452I, V466I, D471E, H483Q, L491S, S519N, K527R, K530R, A534S, A554S  
99ET17 99ET17 None None   V35T, T39E, S48T, K122E, D123S, K173A, D177E, I178L, T200E, Q207N, R211K, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, P294T, S322A, Q334H, G335D, R356K, M357R, G359T, A371V, I375V, K390R, E404D, K431T, V435A, A437V, K454R, V466I, D471E, Q480H, H483Q, L491S, K512N, L517I, S519N, K527N, A534S, A554S  
99ET3 99ET3 None None   V35T, E36A, T39E, K122E, D123G, A158S, K173A, D177E, E194D, T200A, Q207E, V245Q, A272P, K277R, T286A, A288G, E291D, V292I, I293V, P294T, Q334D, G335D, P345S, R356K, G359T, V381I, I382X, T386V, K388R, F416Y, P420S, K424S, Q428E, E432R, V435I, F440L, N447G, E449K, L452G, D460S, R461K, K465E, V466I, V467L W383K, F389R, L391V, P392K, Q394I, T397N, W398C, E399Q, A400Q, E404W, Y405G, W406I, Q407L, A408G, T409F, P412G, W414F, E415F, V417C, P421Q, V423F, L425N, W426M, Y427V, L429R, P433A, I434A, E438M, T439F, Y441G, V442F, D443L, T450E, K454L, A455E, Y457L, T459H, G462K, S468D 
99ET7 99ET7 None None   V35T, E36A, T39E, S48T, K122E, D123S, K166R, K173A, D177E, T200A, Q207G, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, G359T, T369V, E370G, T377M, S379G, T386I, K390R, A400T, E404D, E413D, A437V, L452I, V466I, D471E, T477A, H483Q, L484I, L491S, S519N, K530R, V531I, A534T, A554N  
99ET8 99ET8 None None M184I  M16I, V35T, E36A, T39E, E40K, M41I, G45R, G51R, R78K, W88*, G93R, A98S, G112E, K122E, D123S, G141E, W153*, A158S, K173A, D177E, G196R, T200A, Q207E, W212*, V245Q, W252*, A272P, K277R, R284K, G285R, T286A, E291N, V292I, I293V, P294T, K311R, G316R, E328K, Q334H, G335D, R356K, M357R, R358K, G359T, T377L, W383*, K390R, W398*, E404D, W410*, E413K, W414*, W426*, V435A, A437V, R448K, L452I, G453R, G462R, R463K, Q464H, V466I, D471E, H483Q, L491S, G504K, L517I, A534S, W535*, G541R, G543R, V548I, A554S, G555R G152K, G231K, G273K, G352E, G384R, G444R, G456K, G544S