Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Toni (2005)
Title Presence of CRF09_cpx and complex CRF02_AG/CRF09_cpx recombinant HIV type 1 strains in Cote d'Ivoire, West Africa.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype CRF09_cpx, CRF02_AG

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
00IC_10092 00_10092 None None   V35T, T39A, K49R, I135V, T139M, Q145V, S162C, E169D, K173T, Q174K, D177E, T200A, I202V, Q207E, R211K, V245Q, E248D, D250E, L283I, T286V, I293V, P294T, L295M, I326V, G335D, R356K, M357K, G359S, K366R, T369V, E370D, A371V, I375V, A376T, K390R, E399D, T403S, E432D, V435I, T470N, D471E, Q480H, H483Y, L491P, I495V, K512Q, S519N, Q524K, K527E, K530R, A534S, A554N  
01IC_17395 01_17395 None None   V21I, V35T, T39L, I135T, K173I, Q174K, D177E, T200A, Q207E, R211K, P243S, V245Q, E248D, K249Q, D250E, T286A, E291D, V292I, I293V, P294T, G335D, R356K, M357K, G359S, A371V, I375V, A376I, I380V, A400T, T403A, E432D, V435M, R461K, D471E, Q480H, H483Y, L491Q, K512R, S519N, Q524K, K527E, A534S, A554N, K558R  
01IC_PCI118 01_PCI118 None None   V21I, V35T, T39A, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250E, K281R, T286A, I293V, P294T, I326V, G335D, M357K, G359S, K366R, T369V, A371V, I375A, V381I, A400T, T403A, E432D, V435I, D471E, Q480H, L491S, S519N, Q524K, K527E, A534S, A554S  
01IC_PCI123 01_PCI123 None None   V21I, K32R, V35T, V60I, K122E, D123N, I135T, E169D, K173E, Q174K, D177E, T200I, Q207E, V245Q, K277R, E291D, V292I, I293V, P294T, F346Y, M357I, R358K, G359S, T377L, K390R, A400T, K431T, E432D, V435G, D471E, Q480Y, H483F, L491S, K512R, L517I, S519N, K527G, E529D, A534S, A554S  
01IC_PCI127 01_PCI127 None None   V35T, I135T, S163T, T165I, K173A, Q174K, D177E, T200A, I202V, Q207E, R211K, F214L, E248D, S251C, K275Q, T286A, E291D, V292I, I293V, P294T, E300D, K311R, I326V, G335D, R356K, M357K, G359S, K366R, A371V, I375V, A376T, T377P, V381I, E399D, A400T, T403A, E432D, V435M, A446S, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529N, A534S, A554N  
97IC_PCI3 97_PCI3 None None   V21I, V35L, I135V, I142M, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358K, G359S, K366R, T369A, E370D, A371V, I375V, A376T, T377L, A400T, E432D, V435I, R461K, D471E, Q480Y, L491S, K512R, S519N, Q524K, K527E, E529A, A534S, A554S, K558T  

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