Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Arroyo (2005)
Title HIV-1 diversity and prevalence differ between urban and rural areas in the Mbeya region of Tanzania.
Citation AIDS
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 14
NumPts 14
Subtype C, A

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
CO178 CO178 None    D25E, V31I, L45Q, M50I, F100Y, L101I, T112V, T125A, K136Q, D167E, K188R, V201I, L234I, A265V, R269K, D278A  
CO3056 CO3056 None    S17N, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, I182V, V201I, K211R, T218I, L234I, A265V, R269K, D278A, S283G  
CO328 CO328 None    K14R, D25E, K34R, F100Y, L101I, T112V, T124A, T125A, K188R, V201I, T218I, L234I, A265V, D278A, V281M, S283G  
CO3305 CO3305 None    E11D, K14R, S24N, D25E, V31I, S39C, S57G, I72V, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, K215N, T218I, L234I, D278A, S283G  
CO346 CO346 None    I72V, L101I, T112V, I113V, T124A, T125A, G134D, K136Q, D167E, V201I, I208M, E212A, Q221P, S283G  
CO3710 CO3710 None    D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, L234I, A265V, R269K, D278A, S283G  
CO3720 CO3720 None    K14R, A21T, V31I, I72V, G106A, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V180A, V201I, D207E, K211R, S283G  
CO6025 CO6025 None  G118R  E10D, V31I, S39N, M50I, G70R, I72V, I84M, F100Y, L101I, T112V, T124S, T125A, W131*, K136Q, G140R, M154I, D167E, V201I, L234I, R269K, D278A G149R 
CO6130 CO6130 None    E11D, E13D, K14R, A21T, D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D256E, D278A, S283G  
CO6721 CO6721 None    D25E, V31I, F100Y, L101I, T112V, T124A, T125A, F181L, K188R, V201I, T206S, Q209P, Q214P, Q216P, T218I, Q221P, L234I, K240X, I251L, A265V, R269K, D278A, S283G, D288E  
CO6770 CO6770 None    D6E, V31I, V37I, M50I, I84M, L101I, T112V, S119T, T124S, T125A, K136Q, V201I, Q216R, T218L, K219Q, L234I, R269K, D278A  
CO6968 CO6968 None    V31I, I60M, I72V, T112V, I113V, T124A, T125A, F181L, V201I, I203M, Q216R, T218L, K219Q, L234I, A265V, R269K, D278A, S283G  
CO883 CO883 None   G163R G4R, K14R, W19*, M22I, D25E, K34R, G52R, G59R, G70R, G94R, F100Y, L101I, S119T, T124A, T125A, W131*, W132*, G134S, K136Q, F185Y, K188R, V201I, R224Q, L234I, W235*, A265V, I268L, R269K, D278A, S283G, D288N G47K, G140K, G192K, G197E 
CO9 CO9 None    V31I, I72V, Q95H, G106A, T112V, I113V, T125A, G134N, K136Q, F181L, V201I, L234I, S283G