Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Vinoles (2005)
Title Seroincidence and phylogeny of human immunodeficiency virus infections in a cohort of commercial sex workers in Montevideo, Uruguay.
Citation Am J Trop Med Hyg
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 5
NumPts 5
Subtype B, B + F

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
01UYTRA1020 01U_1020 None None   S105A, D123E, I135V, I142V, P176Q, I178M, E194K, Q197E, A272P, T286P, V292I, I293V, E297R, G333E, K385R, K390R, Q394L, E399D, A400T, K431T, V435T, G436S, A446S, L452K, V466A, D471E, T477A, Q480H, H483Q, L491S, L517I, S519N, A534S K366E 
01UYTRA1092 01U_1092 None None   V60I, D123E, I135T, I195T, I244V, K277R, T286A, I293V, E297A, I326V, Q334H, A360T, A376S, T377M, T403M, K451R, V467I, S468P, H483N, Q509K, I556V T131A 
01UYTRA1101 01U_1101 Unknown Unknown M184I M230I E36K, M41I, E44K, G45R, I50V, G51R, W71*, R72K, E79K, W88*, E89K, G93R, G99R, I135T, W153*, G155R, R172K, G190R, G196E, T200A, W212*, W229*, V245M, W252*, G262R, W266*, A272P, V276I, L283I, R284K, G285R, I293V, E297V, E302K, A304E, E305K, R307K, G316R, D320N, G333R, A355T, A371V, A376V, I380V, W383*, G384E, T386M, W398*, W401*, W402*, T403I, W410*, W414*, W426*, V435I, G436E, R448K, E449K, G453R, R461K, G462R, V467I, S468P, G504R, Q509K, A534T, W535*, G541R, G543E, A554N, V559I G213R, G231S, E248G, G273E, G352E, G444R, G555K 
01UYTRA1179 01U_1179 None None   K64R, I135T, T200A, A288S, V292I, I293V, E297A, A360T, A376T, T386I, T403I, S468P, L517I, Q520K, K527N, A554S  
TRA1116 TRA1116 None None   R83K, K122E, I135V, I202V  

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