Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Keele (2006)
Title Chimpanzee reservoirs of pandemic and nonpandemic HIV-1.
Citation Science
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup CPZ
SelectedType Clinical
NumIsolates 26
NumPts 26
Host Chimpanzee

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
SIVcpzDP109 DP109 None    K14R, N27H, V31I, S39T, M50R, L74I, T112I, S119T, T124S, K136Q, V165I  
SIVcpzDP206 DP206 None    K14R, N27H, V31I, S39T, M50R, L74I, T112I, S119T, T124S, K136Q, V165I  
SIVcpzDP24 DP24 None    K14R, N27H, V31I, S39T, M50R, L74I, T112I, S119T, T124S, K136Q, V165I  
SIVcpzDP25 DP25 None    K14R, N27H, V31I, S39T, M50R, L74I, T112I, S119T, T124S, K136Q, V165I  
SIVcpzEK502 EK502 None    K14R, D25E, V31I, M50I, V54I, D55N, I60V, I84L, L101I, T112V, T124A, G134N, K136Q, V150A, V165I  
SIVcpzEK505 EK505 None    K14R, R20K, V31I, M50I, V54I, D55N, I60V, I84L, L101I, T112V, T124A, G134N, K136Q, V150A, V165I, S195T, V201I, K211T, E212K, K215T, T218L, I220V, D232E, L234T, S255G, D279G, R284G, D288S  
SIVcpzEK506 EK506 None    K14R, D25E, V31I, M50I, V54I, D55N, I60V, I84L, L101I, T112V, T124A, G134N, K136Q, V150A, V165I  
SIVcpzEK507 EK507 None    K14R, D25E, V31I, M50I, V54I, D55N, I60V, I84L, L101I, T112V, T124A, G134N, K136Q  
SIVcpzEK519 EK519 None    K14R, R20K, V31I, K42X, M50I, V54I, D55N, I60V, I84L, L101I, K103R, T112V, T124A, T125A, G134N, K136Q, V150A, V165I, E170K  
SIVcpzLB186 LB186 None    K14R, S17N, L28I, V31I, L74I, I84M, L101V, T112V, T124S, T125A, G134N, K136Q, M154I  
SIVcpzLB7 LB7 None   S230R K7R, S17N, V31I, I72V, I84M, L101I, G106S, T112I, T125A, K136Q, V201I, K211T, T218S, I220V, N222K, L234I, I251L, N254Q, D256E, D278A, D279N, V281L, S283D, D288N G134Q, S255E, A276E 
SIVcpzMB23 MB23 None    K14R, S17N, L28I, V31I, M50I, I72V, Y99F, L101I, T112V, T124S, T125A, K136Q, E138D, V165I G134Q 
SIVcpzMB24 MB24 None    K14R, S17N, L28I, V31I, M50I, I72V, Y99F, L101I, T112V, T124S, T125A, K136Q, E138D, V165I G134Q 
SIVcpzMB245 MB245 None    S17N, V31I, S39N, M50I, I84M, L101I, T112V, T124S, K136Q, V165I  
SIVcpzMB317 MB317 None    S17N, R20K, L28I, V31I, L74I, L101I, T112V, T124S, T125A, K136Q, M154I, V165I G134Q 
SIVcpzMB66 MB66 None    S17N, V31I, S39N, M50I, I84M, L101I, T112V, T124S, K136Q, V165I, V201I, I204L, K211T, E212K, K215Q, T218S, K219N, N222K, L234I, I251L, N254Q, D256E, D288N S255E 
SIVcpzMT114 MT114 None    D6E, K14R, D25E, V31I, S39Q, L63I, L74I, L101V, K111R, S119P, T124S, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT115 MT115 None    D6E, K14R, D25E, V31I, S39Q, L63I, L74I, L101V, K111R, S119P, T124S, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT117 MT117 None    D6E, K14R, D25E, V31I, S39Q, L63I, L74I, L101V, K111R, S119P, T124S, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT142 MT142 None    D6E, K14R, R20K, V31I, S39Q, L63I, L74I, L101V, S119P, T124N, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT143 MT143 None    D6E, K14R, R20K, V31I, S39Q, L63I, L74I, L101V, S119P, T124N, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT145 MT145 None    D6E, K14R, R20K, V31I, S39Q, L63I, L74I, L101V, S119P, T124N, T125A, K136R, G163E, V201I, T218L, N222Q, R231K, L234I, N254Q, S255D, D256E, D278A, C280S, D288S S24Q 
SIVcpzMT147 MT147 None    D6E, K14R, R20K, V31I, S39Q, L63I, L74I, L101V, S119P, T124N, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT148 MT148 None    D6E, K14R, D25E, V31I, S39Q, L63I, L74I, L101V, K111R, S119P, T124S, T125A, G134N, K136R, G163E S24Q 
SIVcpzMT149 MT149 None    D6E, K14R, R20K, V31I, S39Q, L63I, L74I, L101V, S119P, T124N, T125A, G134N, K136R, G163E S24Q 
SIVpczMB192 MB192 None    K14R, S17N, L28I, V31I, M50I, I72V, Y99F, L101I, T112V, T124S, T125A, K136Q, E138D, V165I G134Q