Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Marechal (2006)
Title Increasing HIV type 1 polymorphic diversity but no resistance to antiretroviral drugs in untreated patients from Central African Republic: a 2005 study.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 96
NumPts 96
Subtype J, A, CRF45_cpx, CRF01_AE, G, K, G + J, CRF02_AG, F, CRF13_cpx, CRF18_cpx, D, Unknown

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
JF_001 JF_001 None    I13V, G17E, K20L, E34K, M36I, Q61N, I62M, L63CS, C67E, H69K, V77I G51GV 
JF_002 JF_002 None    L10V, I15V, K20R, E35D, M36I, R41K, D60DE, Q61QE, I62IV, I64IM, H69Q, I72V, V82VI, L89M, I93IL  
JF_003 JF_003 None    T4S, I15V, G16A, E35D, M36I, N37D, D60E, Q61N, C67E, H69K, V77I, L89M  
JF_004 JF_004 None    G16E, K20R, M36I, P39S, R41K, D60E, I62V, L63S, E65D, H69K, L89M  
JF_005 JF_005 None    L10V, I13V, K14R, G16A, E35D, M36I, N37DE, R41K, R57K, D60E, Q61N, L63M, C67E, H69K, V77I, L89M  
JF_006 JF_006 None    I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
JF_007 JF_007 None    L10V, I13V, E35D, M36L, R41K, R57K, L63T, H69K, L89M  
JF_008 JF_008 None    K14R, G16A, L19IM, M36I, N37D, R57RK, Q61E, L63LP, I64IM, C67E, H69K, K70R, L89M  
JF_009 JF_009 None    T12DE, I13V, L19I, K20I, E35D, M36I, R57K, L63S, C67S, H69K, V82I, L89M  
JF_010 JF_010 None    L10V, G16A, E35ED, M36I, R41K, D60E, Q61E, I62V, C67E, H69K, L89M  
JF_011 JF_011 None    R8RG, E35D, M36I, R41K, L63T, H69K, L89M P79R 
JF_012 JF_012 None    L10V, M36I, N37D, R41K, L63P, E65D  
JF_013 JF_013 None    I13V, I15V, L19I, K20I, E35D, M36I, R41K, I64L, E65D, C67S, H69K, V82I, L89M  
JF_014 JF_014 None    I13V, E35D, M36I, H69K, L89M  
JF_016 JF_016 None    L10IV, T12TS, I13V, K14KN, G16E, L19LI, M36L, N37X, R41K, L63T, I72V, L89M  
JF_017 JF_017 None    I13V, E35D, M36I, R41K, H69K, L89M  
JF_021 JF_021 None    V11I, T12EQ, I13V, I15V, L19I, K20I, M36I, N37D, R41K, L63P, C67S, H69K, T74K, L89M  
JF_022 JF_022 None    T12E, I13V, L19I, K20I, E35D, M36I, N37D, R57K, Q61E, L63S, I64IM, C67S, H69R, P79PS, V82I, L89M  
JF_023 JF_023 None    I13V, K14R, G17E, K20V, E34K, E35ED, M36I, N37D, P39S, R41K, K45R, D60E, Q61N, I62M, L63T, C67E, H69K, I72IV, V77I, L89M  
JF_024 JF_024 None    T12A, G16A, M36I, N37D, D60E, Q61E, I62IV, L63P, C67E, H69K, L89M  
JF_026 JF_026 None    I13V, I15V, E35D, M36I, R41K, L63T, H69K, L89M  
JF_027 JF_027 None    I15V, G16A, E35D, M36I, N37E, R57K, D60E, Q61D, L63IT, C67E, H69K, L89M  
JF_029 JF_029 None    G16A, E35D, M36I, N37D, D60E, Q61E, I62V, L63P, C67E, H69K, I72M, V77I, L89M  
JF_030 JF_030 None   L89MV T12TK, I13V, L19I, K20I, E35KQ, M36I, N37D, I64M, C67E, H69K, V82I  
JF_032 JF_032 None    E35D, M36I, R41K, K45R, L63T, H69K, L89M  
JF_033 JF_033 None   L23LI I13V, I15V, E35D, M36I, R41K, K45R, H69K, L89M  
JF_034 JF_034 None    E35N, M36I, N37D, R41K, L63P, H69K, L89M  
JF_035 JF_035 None    I15V, G16A, M36I, N37D, K43R, D60E, Q61E, L63T, C67E, H69K, L89I  
JF_038 JF_038 None    L10LI, I13IV, G16A, K20KR, M36I, N37D, R41RK, K55KR, R57K, D60E, Q61E, L63LV, C67E, H69K, L89IM  
JF_039 JF_039 None    I13V, K20I, E35D, M36I, L38I, P39S, R41K, L63S, H69K, K70R, V82I, L89M  
JF_041 JF_041 None    L10I, I13V, G16A, M36I, N37ND, D60E, Q61E, L63V, C67E, H69K, L89M  
JF_042 JF_042 None    G16A, E35ED, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, I72IT, V77I, L89M  
JF_043 JF_043 None    G16A, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
JF_044 JF_044 None    L10I, G16A, M36I, N37D, D60E, Q61E, L63V, C67E, H69K, V77I, L89M  
JF_046 JF_046 None    L10I, G16A, E35D, M36I, N37D, R41K, D60E, Q61E, L63T, C67E, H69K, L89M  
JF_049 JF_049 None    T12P, I13V, K20R, E35D, M36I, R41K, K45R, L63P, C67Y, H69K, L89M  
JF_051 JF_051 None    L10V, I13V, G16E, E35D, M36I, P39PS, R41K, H69K, L89M  
JF_052 JF_052 None    L10I, I13V, G16A, E35D, M36I, N37D, R57K, D60E, Q61E, L63V, C67E, H69K, L89M  
JF_053 JF_053 None    I15V, M36I, N37D, R41K, C67Y, H69K, L89M  
JF_054 JF_054 None    L10IV, I13V, G16E, K20R, E35D, M36I, R57K, L63S, H69K, K70E, L89IM  
JF_057 JF_057 None    V11I, T12K, I13V, L19T, K20I, E35G, M36I, N37D, R41K, K43R, C67S, H69K, V82I, L89M  
JF_058 JF_058 None    L10IV, I13V, E35D, M36I, N37D, R41K, H69K, L89M  
JF_059 JF_059 None    L10I, G16A, M36I, N37D, D60E, Q61E, L63I, C67E, H69K, V77I, L89M  
JF_061 JF_061 None    I13V, K20KR, E35D, M36I, N37D, H69K, A71AV, I72IV, L89M  
JF_062 JF_062 None    I13V, E35D, M36I, N37D, R41K, H69K, L89M  
JF_063 JF_063 None    L10I, I13V, I15IV, E35D, M36I, N37D, R57K, L63P, L89M, I93M H69EK 
JF_064 JF_064 None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
JF_066 JF_066 None    L10V, I13V, I15V, G16A, K20R, M36I, N37D, R41K, D60E, Q61E, L63V, C67E, H69K, V77I, L89M  
JF_067 JF_067 None    I13V, K14R, G17D, K20I, E21EK, E34K, M36I, P39A, R41K, K45R, D60E, Q61N, I62M, L63A, C67E, H69K, V77I, L89M  
JF_068 JF_068 None    I13V, L19I, E35D, M36I, R41RK, H69K, L89M  
JF_069 JF_069 None    L10M, V11I, I15IV, G16A, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, I72IT, V77I, L89M, I93L D25DG 
JF_070 JF_070 None    L10I, I15L, G16A, R41K, D60E, Q61D, I62V, L63I, C67E, H69K, V77I, L89M  
JF_071 JF_071 None    L10I, L19I, E35D, M36I, R41K, K45KR, R57K, L63I, H69K, I72IM, L89M G51GV, I66IM 
JF_074 JF_074 None    I13V, I15V, Q18R, K20M, D25E, D29N, C67D, H69K, T91N T26HY, Q92S, I93D 
JF_076 JF_076 None    L10I, I13IV, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M I66M 
JF_077 JF_077 None    L10I, I15L, G16A, R41K, D60E, Q61D, I62V, L63I, C67E, H69K, V77I, L89M  
JF_079 JF_079 None    G16E, E35D, M36I, R41K, I62V, L63V, G68E, H69K, K70R, L89M, T91V, I93L  
JF_080 JF_080 None    I13V, E35D, M36I, R41K, H69K, P79PH, L89M  
JF_081 JF_081 None    L10I, K14R, I15V, G16GE, E34EV, E35D, M36I, N37D, R41K, R57K, C67E, H69K, L89M G40GA 
JF_082 JF_082 None    I13V, K14R, I15V, E35D, M36I, N37D, R41K, R57K, H69K, L89M  
JF_083 JF_083 None    G16A, E35G, M36I, N37D, Q61N, I62M, L63AT, C67E, H69K, I72IV, V77I, L89I  
JF_085 JF_085 None    L10LI, I13IV, I15V, G16A, M36I, N37D, K43R, R57K, D60E, Q61E, L63T, C67EG, H69K, I72T, L89M G68GR 
JF_086 JF_086 None    T12K, I13V, L19I, K20I, E35D, M36I, N37D, R41K, C67S, H69K, V82I, L89M  
JF_090 JF_090 None    L10V, I15V, L19M, K20R, E35D, M36I, R41K, H69Q, L89M  
JF_091 JF_091 None    I15V, G16A, K20R, M36I, N37D, I62V, L63T, E65Q, G68D, H69K, L89M, I93L  
JF_093 JF_093 None    L10V, I13V, G16A, E35D, N37E, D60E, Q61E, C67E, H69K, K70R, V77VIM, L89I  
JF_096 JF_096 None    L10I, G16A, K20KR, M36I, N37D, D60E, Q61G, I62IM, L63T, I64IM, C67E, H69K, K70KR, V77I, L89M  
JF_098 JF_098 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
JF_099 JF_099 None    L10I, T12A, I13V, K14R, I15IV, G16E, K20I, E35N, M36I, P39S, R41K, R57K, L63S, E65D, I72V, P79PH, L89M  
JF_101 JF_101 None    L10M, I13V, L33V, E35D, M36I, R41K, H69K, L89M  
JF_102 JF_102 None    G16A, L19M, E35D, M36I, N37E, R57K, D60E, Q61E, I62V, C67E, H69K, L89M  
JF_103 JF_103 None    G16A, E35D, M36I, N37ND, R57K, D60E, Q61EG, L63T, C67E, H69K, V77I  
JF_105 JF_105 None    L10I, T12R, I13V, I15V, L19M, K20I, M36I, P39PS, R41K, L63P, H69N, L89M  
JF_107 JF_107 None    T12KQ, I13V, I15V, L19I, K20I, M36I, N37D, R41K, I64IM, H69K, K70R, V75I, V82I, L89M C67M 
JF_108 JF_108 None    G16A, E35EDG, M36I, N37DE, D60E, Q61E, I62IV, L63T, C67E, H69K, I72IT, V77I, L89M  
JF_110 JF_110 None    T12K, I13V, K14R, L19M, K20I, M36I, N37D, R41K, Q61E, I64L, C67S, H69R, K70R, V82I, L89M  
JF_111 JF_111 None    I15V, G16A, E35D, M36I, N37D, D60E, Q61X, L63M, C67E, H69K, V77VI, L89M  
JF_114 JF_114 None    L10I, G16A, M36I, D60E, Q61E, L63T, C67E, H69K, L89M, I93L  
JF_116 JF_116 None    L10LV, I13V, K14R, L19P, K20I, M36I, N37D, R41K, L63X, H69K, L89M  
JF_119 JF_119 None    L10I, T12TA, I13V, I15V, G16A, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
JF_121 JF_121 None    I15V, L19IV, E35D, M36I, R41K, R57K, H69K, K70R, V77VI, L89M A28AT 
JF_122 JF_122 None    I13V, E35D, M36I, R41K, D60E, Q61N, L63T, E65D, H69K, V77I, L89M  
JF_123 JF_123 None   G73S Q7QH, I15V, G16A, E35D, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
JF_124 JF_124 None    I13IV, E35D, M36I, G40GE, R41K, Q61H, H69K, L89M  
JF_127 JF_127 None    L10I, G16E, K20R, M36I, D60DE, Q61N, L63T, C67E, H69K, V77I, L89M, I93L  
JF_130 JF_130 None    L10I, I15IV, G16A, E35D, M36I, N37D, D60E, Q61D, L63T, C67E, H69K, V77I, L89M  
JF_131 JF_131 None    L10I, T12R, I13V, L19I, K20I, M36I, N37D, R41K, I64L, C67S, H69K, V82I, L89M  
JF_138 JF_138 None    L10I, I15IV, G16A, E35D, M36I, N37D, R57RK, D60E, Q61D, L63T, C67E, H69K, V77I, L89M  
JF_141 JF_141 None    I13V, G16E, K20I, E35D, M36I, R41K, D60E, I62V, I64M, H69K, L89M  
JF_142 JF_142 None    V11I, T12K, I13V, L19I, K20I, E35D, M36I, N37E, R41RT, R57K, Q61QR, I64M, C67G, H69K, V82VI, L89M  
JF_144 JF_144 None    K14KR, I15V, G16A, M36I, N37D, R57K, D60E, Q61E, L63IT, C67E, H69K, L89M  
JF_145 JF_145 None    L10I, I13V, K14R, I15V, G16A, E35D, R41K, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
JF_146 JF_146 None    I15V, G16A, K20R, M36I, N37D, R57K, D60E, Q61E, L63T, C67E, H69K, V77I, L89M  
JF_147 JF_147 None    E35D, M36I, R41K, L63S, H69K, L89M  
JF_148 JF_148 None    L10I, I13IV, G16A, E35D, M36I, N37D, R57K, D60E, Q61E, L63I, C67E, H69K, L89M, I93L  
JF_149 JF_149 None    L10V, T12K, I13V, K14R, G16GE, K20I, M36I, R41K, K43KR, C67Y, H69K, L89M