Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Hsu (2005)
Title Characterization of mutations in CRF01_AE virus isolates from antiretroviral treatment naive and experienced patients in Singapore.
Citation JAIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 104
NumPts 104
Subtype CRF01_AE, CRF33_01B

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 104 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
BAA148356 BAA148356 IDV, NFV 134 N88S  I13V, E35D, M36I, R41K, I64IV, H69K, L89M  
BAA148357 BAA148357 IDV, SQV, RTV 65   I13V, I15V, E35D, M36I, R41K, L63V, H69K, L89M, I93L  
BAA148358 BAA148358 SQV, RTV 52   I13V, E35D, M36I, R41K, H69K, L89M  
BAA148360 BAA148360 None    G16A, E35D, M36I, R41K, L63P, H69K, I72V, L89M, I93L  
BAA148361 BAA148361 None    L10V, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, I72V, L89M  
BAA148362 BAA148362 None  I84V L33F, N83D, L89V L10I, I13V, E35D, M36IL, N37D, K43R, R57K, L63LP, H69K, A71V  
BAA148363 BAA148363 SQV, RTV 35 I84V, L90M  L10V, I13V, K20R, E35D, M36I, R41K, L63P, H69K, L89M  
BAA148364 BAA148364 None    K14R, G16E, E35D, M36I, R41K, H69K, L89M, I93L  
BAA148375 BAA148375 SQV, RTV   I13V, E35D, M36I, R41K, H69K, L89M  
BAA150606 BAA150606 None    I13V, E35D, M36I, R41K, H69K, V82I, L89M  
BAA150607 BAA150607 SQV, RTV 78 M46ML, G48V, I84IV, L90LM L89V I13V, E35D, M36I, R41K, H69K  
BAA150609 BAA150609 None    I13V, E35D, M36I, R41K, L63P, H69K, L89M  
BAA150613 BAA150613 None    I13V, G16E, E35D, M36I, R41K, H69K, V82I, L89I  
BAA150616 BAA150616 None    I13V, E35D, M36I, R41K, H69K, L89M  
BAA150617 BAA150617 SQV, RTV 17   I13IV, E35D, M36I, R41KN, L63P, H69K, K70R, L89M  
BAA150620 BAA150620 None    I13V, G16E, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
BAA150624 BAA150624 SQV, RTV 31 G48V, I84V L33F, Q58E, N83D L10V, I13V, K14KN, K20R, E35D, M36I, R41K, L63LP, H69K, L89I  
BAA150627 BAA150627 SQV, RTV 61 G48V, I54IV, V82A L33F, F53L, N83D L10I, I13V, M36L, R41K, I62IV, L63P, H69K, T74S, L89IM, I93IV  
BAA154758 BAA154758 IDV 152   T12P, I13V, G16E, E35D, M36I, N37D, L63H, H69K, L89M  
BAA154759 BAA154759 None   L33LF I13LV, E35D, M36I, R41K, H69K, L89M  
BAA154760 BAA154760 NFV 113   K20I, E35N, M36I, N37D, R41K, L63P, H69K, T74A, L89M, I93L  
BAA154762 BAA154762 SQV, RTV 113   I13V, I15IV, E35D, M36I, R41K, H69K, K70KR, L89M  
BAA154763 BAA154763 None    I13V, I15V, E35D, M36I, R41K, H69K, V82I, L89M  
BAA154764 BAA154764 None    I13V, I15V, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
BAA154768 BAA154768 None    L10V, I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
BAA154769 BAA154769 None    I13V, E35D, M36I, R41K, H69K, K70R, L89M  
BAA154770 BAA154770 IDV 52   I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
BAA154777 BAA154777 SQV, NFV 182   I13V, E35D, M36I, R41K, H69K, L89M  
BAA157663 BAA157663 SQV    I13IV, L33LV, E35D, M36I, P39PS, R41K, H69K, L89M  
BAA157664 BAA157664 None    I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M  
BAA157666 BAA157666 None   L89V I13V, K20I, E35D, M36I, R41K, H69K  
BAA157667 BAA157667 None    L10I, I13V, E35D, M36I, R41K, K55KR, L63P, H69K, L89M, I93V  
BAA157668 BAA157668 None    L10LV, I13V, K14KR, I15V, E35D, M36I, R41K, L63T, H69K, L89M  
BAA157670 BAA157670 None    I13V, E35D, M36I, R41K, H69K, V82VI, L89M  
BAA157671 BAA157671 None    I13V, K14R, I15V, E35D, M36I, R41K, H69K, L89M  
BAA157672 BAA157672 None    E35D, M36I, R41K, H69K, K70R, L89M  
BAA157673 BAA157673 None    I13V, E35D, M36I, N37NT, R41K, H69K, L89M  
BAA157674 BAA157674 RTV, IDV 22   I13V, G17E, K20I, E35D, M36I, R41K, L63S, H69K, L89M  
BAA157675 BAA157675 RTV, IDV   I13V, E35D, M36I, R41K, L63P, H69K, L89M  
BAA157676 BAA157676 None    L10I, I13V, E35D, M36I, N37D, R41K, L63S, H69K, K70R, L89M  
BAA157677 BAA157677 None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, V77I, L89I, T91V  
BAA157678 BAA157678 SQV, RTV 131 G48V L33F, N83D I13V, E35D, M36I, R41K, H69K, L89M  
BAA157679 BAA157679 IDV 231 M46MI, L90M  K14R, K20I, E35D, M36I, R41K, L63P, H69K, A71V, L89M, I93L  
BAA157680 BAA157680 None    I13V, E35D, M36I, R41K, K43KR, H69K, V82I, L89M  
BAA157681 BAA157681 None    L10I, I13IV, G16GE, K20M, E35D, M36I, R41K, H69K, L89I  
BAA157683 BAA157683 SQV, RTV 22   I13V, E35D, M36I, R41K, H69K, L89M  
BAA157684 BAA157684 None    L10I, I13V, G16GE, E35D, M36I, R41K, H69K, L89M, L97I  
BAA161414 BAA161414 None    I13V, I15V, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L  
BAA161416 BAA161416 IDV 309   I13V, G16GE, E35D, M36I, R41K, H69K, L89M  
BAA161419 BAA161419 SQV, RTV   L89MV I13V, K20I, E35D, M36I, R41K, H69K, T74S  
BAA161420 BAA161420 None    I13V, E35D, M36I, R41K, Q61QE, H69K, L89M  
BAA161422 BAA161422 IDV 317 M46ML, I54IV, V82F  L10LI, I13V, K20KI, E35D, M36I, R41K, I62V, H69K, T74A, L89M  
BAA161424 BAA161424 IDV 91  L89MV I13V, K20KI, E35D, M36I, R41K, I62V, H69K, K70R, T74A  
BAA161428 BAA161428 IDV 39  L33F I13V, E35D, M36I, R41K, H69K, L89M, I93V  
BAA161429 BAA161429 RTV, IDV 78   L10V, K20R, E35D, M36I, R41K, H69K, I72V, L89M  
BAA161430 BAA161430 IDV, SQV 88 G48V, I54V, V82A F53L L10I, I13V, L19LV, K20R, E35D, M36I, N37D, R41K, I62V, L63LP, H69K, A71T, T74S, L89I  
BAA161433 BAA161433 IDV, SQV, RTV 270 G48V, L90M L33F, N83D L10I, I13V, E35D, M36I, R41K, L63T, H69K, L89IM  
BAA161436 BAA161436 SQV, RTV 26  L33F L10I, I13V, R41K, I62V, L63I, H69K, K70R, V82I, L89M, F99L  
BAA161439 BAA161439 NFV 252 I84IV L10F, K20T, L89V I13V, E35D, M36I, R41K, H69K, A71T, T74S  
BAA161440 BAA161440 None    I13V, I15V, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
BAA161443 BAA161443 None    E35D, M36I, R41K, I62IV, L63X, H69K, L89M T74TI 
BAA161445 BAA161445 SQV, RTV 61   I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
BAA161446 BAA161446 None    I13V, G16A, E35D, M36I, R41K, H69K, L89M  
BAA161447 BAA161447 None    I13V, K14R, E35D, M36I, R41K, H69K, V82I, L89M  
BAA161448 BAA161448 Unknown    I13V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870189 BAA161371 None    L10M, E35D, M36I, R41K, C67H, H69K, L89M  
LYH_AY870190 BAA161372 None    I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
LYH_AY870191 BAA161374 None    L10I, I13V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870192 BAA161376 None    L10I, I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
LYH_AY870193 BAA161377 None    L10I, I13V, K14R, E35D, M36I, N37D, R41K, L63C, H69K, L89M  
LYH_AY870194 BAA161378 None    I13V, E35D, M36I, R41K, R57K, L63A, H69K, L89M  
LYH_AY870195 BAA161379 None    T12I, G16E, K20R, E35D, M36I, R41K, R57K, H69K, L89M, I93L  
LYH_AY870196 BAA161380 None    I13V, I15V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
LYH_AY870197 BAA161381 None    I13V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870198 BAA161382 None    I13V, E35D, M36I, D60E, H69K, L89M  
LYH_AY870199 BAA161383 None    L10I, I13V, G16E, K20KR, E35D, M36I, N37NK, P39S, R41K, L63V, H69K, I72V, L89M  
LYH_AY870200 BAA161384 None    I15V, E35D, M36I, R41K, R57RK, H69K, K70KR, V82I, L89M  
LYH_AY870201 BAA161385 None    Q7QR, I13V, G16E, E35D, M36I, R41K, H69K, L89M, Q92K  
LYH_AY870202 BAA161386 None    I13V, K20R, E35D, M36I, N37D, R41K, K45R, H69K, K70KR, L89M  
LYH_AY870203 BAA161388 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870204 BAA161389 None    I13V, M36I, N37S, R41K, H69K, I72V, L89M  
LYH_AY870205 BAA161390 None    I13V, G16GE, K20R, E35D, M36I, R41K, H69K, L89M  
LYH_AY870206 BAA161392 None    T12P, I13V, E35D, M36I, R41K, L63P, H69K, L89M  
LYH_AY870207 BAA161393 None    I13IV, E35D, M36I, R57K, H69K, V82I, L89M  
LYH_AY870208 BAA161394 None    I13V, I15V, E35D, M36I, R41K, L63P, H69K, L89M  
LYH_AY870209 BAA161395 None    I13V, E35D, M36I, R57K, H69K, L89M, L97I  
LYH_AY870210 BAA161397 None    I13V, M36I, R41K, H69K, I72IV, L89M  
LYH_AY870211 BAA161398 None    I13V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870212 BAA161399 None    I13V, L19I, E35D, M36I, P39S, R41K, Q61E, I62V, L63P, H69K, L89M  
LYH_AY870213 BAA161400 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870214 BAA161401 None    I13V, K14R, E35D, M36I, R41K, H69K, L89M  
LYH_AY870215 BAA161402 None    I13V, L19I, E35D, M36I, R41K, H69K, L89M  
LYH_AY870216 BAA161404 None    I13V, G16E, E35D, M36I, G40GE, R41K, Q61QE, H69K, K70KR, L89M, I93L  
LYH_AY870217 BAA161405 None    I13V, I15IV, K20KR, E35D, M36I, R41K, H69K, L89M  
LYH_AY870218 BAA161407 None   L33F I13V, G16E, E35D, M36I, R41K, L63S, H69K, K70R, L89I, I93L  
LYH_AY870219 BAA161408 None    I13V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870220 BAA161409 None    I13V, M36I, R41K, L63P, H69K, L89M, I93L  
LYH_AY870221 BAA161410 None    I13V, E35D, M36I, R41K, H69K, L89M, F99L  
LYH_AY870222 BAA161412 None    I15V, E35D, M36I, R41K, H69K, L89M  
LYH_AY870223 BAA161413 None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M