Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Toni (2002)
Title Primary HIV-1 drug resistance in Abidjan (Cote d'Ivoire) a genotypic and phenotypic study.
Citation AIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 97
NumPts 97
Subtype CRF02_AG, CRF45_cpx, A, B, CRF01_AE, G, CRF18_cpx, CRF09_cpx

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
TAT_pci1 TAT_pci1 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci100 TAT_pci100 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M K70GR 
TAT_pci101 TAT_pci101 None    I13V, K14R, G17E, K20I, M36I, R41K, H69K, K70R, L89M  
TAT_pci102 TAT_pci102 None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci103 TAT_pci103 None    I13V, K20I, E35N, M36I, R41K, H69K, L89M  
TAT_pci105 TAT_pci105 None    I13V, K20I, E35EK, M36I, R41K, H69Q, K70R, L89M  
TAT_pci106 TAT_pci106 None    I13V, K14R, L19P, K20I, M36I, N37ND, R41K, H69K, L89M  
TAT_pci11 TAT_pci11 None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci12 TAT_pci12 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
TAT_pci13 TAT_pci13 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci14 TAT_pci14 None    I13V, K14R, G17GE, K20I, M36I, P39Q, R41K, I64ILM, H69K, L89M  
TAT_pci16 TAT_pci16 None    I13V, K20I, E34Q, R41K, R57K, L63C, H69K, L89M  
TAT_pci17 TAT_pci17 None    I13V, K14R, G17E, K20I, M36I, N37S, R41K, H69K, K70R, L89M  
TAT_pci18 TAT_pci18 None    T12K, I13V, K14R, K20I, E21EK, M36I, N37D, R41K, H69K, L89M A71R 
TAT_pci19 TAT_pci19 None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
TAT_pci2 TAT_pci2 None    I13V, K14R, K20I, M36I, R41K, L63S, H69K, K70R, I72T, L89M G17A 
TAT_pci20 TAT_pci20 None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci21 TAT_pci21 None    I13V, K14R, G16E, K20I, M36I, R41K, C67S, H69K, L89M  
TAT_pci22 TAT_pci22 None    I13V, K20I, M36I, R41K, H69K, K70R, L89M  
TAT_pci23 TAT_pci23 None    I13V, K14R, G17D, Q18QH, K20I, M36I, R41K, I64M, H69K, K70R, L89M  
TAT_pci24 TAT_pci24 None    Q7E, L10I, I13V, K14R, E35D, M36I, R41K, L63P, C67S, H69K, L89M  
TAT_pci25 TAT_pci25 None    G16GE, E35D, M36MI, R41K, L63S, H69HN, L89M  
TAT_pci26 TAT_pci26 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M  
TAT_pci27 TAT_pci27 None    I13V, K14R, I15V, K20I, M36I, R41K, L63P, I64L, G68E, H69K, L89M, I93L  
TAT_pci28 TAT_pci28 None   K20IT I13V, K14R, G16E, M36I, N37NS, R41K, H69K, L89M  
TAT_pci29 TAT_pci29 None    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
TAT_pci3 TAT_pci3 None    I13V, K14R, G17E, K20I, M36I, R41K, K43KR, H69K, K70KR, L89M  
TAT_pci30 TAT_pci30 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci31 TAT_pci31 None    G16GE, E35D, M36I, R41K, L63C, H69K, L89M  
TAT_pci32 TAT_pci32 None    I13V, K14R, K20R, E35D, M36I, N37D, R41K, H69K, L89M  
TAT_pci33 TAT_pci33 None    I13V, K20I, M36I, R41K, I66V, H69K, K70R, L89M  
TAT_pci34 TAT_pci34 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci35 TAT_pci35 None    I13V, K20I, M36I, R41K, H69K, K70R, L89M  
TAT_pci36 TAT_pci36 None    I13V, K14R, G16E, K20I, M36I, P39S, R41K, L63P, H69K, L89M  
TAT_pci38 TAT_pci38 None   T74TP Q18L, L19I, L63P, A71AV, V77I, I93L C67C*W 
TAT_pci39 TAT_pci39 None    I13V, K14R, K20I, M36I, N37S, R41K, I64L, H69K, L89M  
TAT_pci4 TAT_pci4 None   L89MV I13V, K14R, K20I, M36I, R41K, H69K  
TAT_pci40 TAT_pci40 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci41 TAT_pci41 None    L10I, I13V, M36MI, N37S, I62V, L63A, H69Q, V77VI, L89M  
TAT_pci42 TAT_pci42 None    L10I, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci43 TAT_pci43 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
TAT_pci44 TAT_pci44 None    I13V, K20I, E35D, M36I, N37S, R41K, H69K, K70R, L89M  
TAT_pci47 TAT_pci47 None    I13V, K14R, K20I, E35X, M36I, N37E, R41K, H69K, K70R, L89M  
TAT_pci48 TAT_pci48 None    L10I, I13V, L19P, K20I, M36I, P39S, R41K, L63P, H69K, K70R, L89M  
TAT_pci49 TAT_pci49 None    L10V, I13V, K14R, M36I, R41K, L63P, H69Q, K70KR, L89M  
TAT_pci51 TAT_pci51 None    I13V, K20I, E35D, M36I, L63P, H69K, L89M  
TAT_pci52 TAT_pci52 None    I13V, K20I, E35N, M36I, R41K, H69K, L89M  
TAT_pci53 TAT_pci53 None    I13V, G17E, K20I, M36L, N37S, R41K, L63P, H69K, K70R, L89M  
TAT_pci54 TAT_pci54 None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, V82I, L89M  
TAT_pci55 TAT_pci55 None    I13V, K14R, G17E, K20I, L33I, E34Q, M36I, N37S, P39T, H69K, V77VI, L89M  
TAT_pci56 TAT_pci56 None    L10V, I13V, L19P, K20I, M36L, L38I, R41K, H69K, L89M  
TAT_pci57 TAT_pci57 None    T12K, I13V, K14R, K20I, E21EG, M36I, R41K, I64M, C67Y, H69K, L89M  
TAT_pci58 TAT_pci58 None    I13V, K14R, G17E, K20I, M36K, E65D, H69K, L89M  
TAT_pci59 TAT_pci59 None    I13V, K14T, K20I, E34Q, M36I, P39S, R41K, H69K, V77I, L89M  
TAT_pci6 TAT_pci6 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci60 TAT_pci60 None    I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, V77I, L89M  
TAT_pci61 TAT_pci61 None    I13V, K14R, L19LPS, K20I, M36I, R41K, H69K, L89M  
TAT_pci62 TAT_pci62 None    T12K, I13V, K14R, G17E, K20I, M36I, R41K, Q61H, L63P, H69K, L89M  
TAT_pci63 TAT_pci63 None    I13V, K14R, G17E, K20I, E35D, M36I, R41K, L63V, H69K, K70E, L89M  
TAT_pci64 TAT_pci64 None    I13A, K20I, M36I, R41K, L63P, H69K, L89I  
TAT_pci65 TAT_pci65 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci66 TAT_pci66 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
TAT_pci67 TAT_pci67 None    I13V, K20I, M36I, P39L, R41K, L63P, H69K, K70R, L89M  
TAT_pci68 TAT_pci68 None    I13A, K14R, K20I, E35EK, M36I, R41K, H69K, L89M  
TAT_pci69 TAT_pci69 None    L10V, V11I, I13V, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci7 TAT_pci7 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci70 TAT_pci70 None    I13V, I15L, G16E, K20I, M36I, R41K, L63H, I64M, H69K, K70R, I72V, L89M, I93L  
TAT_pci71 TAT_pci71 None    I13V, K20I, M36I, R41K, I66V, H69K, K70R, L89M I93S 
TAT_pci72 TAT_pci72 None    I13V, K20I, M36I, R41K, I66V, H69K, K70R, L89M I93S 
TAT_pci73 TAT_pci73 None    I13V, K14R, K20I, M36I, R41K, L63P, H69K, P79S, L89M  
TAT_pci74 TAT_pci74 None    I13A, K14R, G16E, K20I, M36I, N37NS, R41K, H69K, I72V, L89M  
TAT_pci75 TAT_pci75 None    I13A, K14R, K20I, M36I, N37ND, P39PS, R41K, H69K, L89M  
TAT_pci76 TAT_pci76 None    I13A, K14R, L19I, K20I, E35D, M36I, R41K, L63A, H69K, L89M  
TAT_pci77 TAT_pci77 None    I13V, K20I, M36I, R41K, H69K, L89M  
TAT_pci78 TAT_pci78 None  I54V, V82F, L90M  L10I, E35D, M36I, N37S, L63P, A71V, I93L  
TAT_pci79 TAT_pci79 None    I13V, K20I, E34D, M36I, R41K, H69K, K70R, L89M  
TAT_pci8 TAT_pci8 None    I13V, K14R, G17E, K20I, M36I, L63P, H69K, K70R, L89M  
TAT_pci80 TAT_pci80 None    I13V, K14R, L19P, K20I, M36I, N37D, R41K, L63S, H69K, L89M  
TAT_pci81 TAT_pci81 None    I13V, K14R, K20I, E21EK, E35D, M36I, R41K, K43R, L63P, H69K, L89M  
TAT_pci82 TAT_pci82 None    I13V, K14R, K20I, M36I, R41K, L63P, H69K, L89M  
TAT_pci83 TAT_pci83 None    I13V, K14R, K20I, M36I, R41K, I64L, H69K, V82I, L89M  
TAT_pci84 TAT_pci84 None    I13V, K14R, K20I, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
TAT_pci85 TAT_pci85 None    I13V, K14R, G17E, K20I, M36I, R41K, L63P, H69K, L89M  
TAT_pci86 TAT_pci86 None    I13V, K14R, K20I, E35D, M36I, R41K, L89M H69EK 
TAT_pci87 TAT_pci87 None    I13V, K14R, K20I, E35D, M36I, N37D, R41K, H69K, L89M  
TAT_pci88 TAT_pci88 None    I13V, K20I, E35N, M36I, N37S, R41K, K43R, R57K, H69K, K70R, L89M  
TAT_pci89 TAT_pci89 None    L10I, I13V, K14R, I15V, L19I, E35D, M36I, R41K, I62V, L63V, H69K, L89M  
TAT_pci90 TAT_pci90 None    I13V, K14R, G17E, K20I, M36I, R41K, H69K, L89M  
TAT_pci91 TAT_pci91 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
TAT_pci92 TAT_pci92 None    I13V, K14R, K20I, E35D, M36I, R41K, I64L, H69K, L89M  
TAT_pci93 TAT_pci93 None    I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
TAT_pci94 TAT_pci94 None    L10V, I13V, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
TAT_pci95 TAT_pci95 None    L10I, I13V, K14R, K20I, M36I, R41K, I64L, H69K, L89M  
TAT_pci96 TAT_pci96 None    I13V, K14R, G17E, K20I, M36I, R41K, L63P, H69K, L89M K70G 
TAT_pci97 TAT_pci97 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
TAT_pci98 TAT_pci98 None    L10V, I13V, K14R, E34D, E35D, M36I, R41K, H69K, L89M  
TAT_pci99 TAT_pci99 None    L10V, K20R, E35D, M36I, R41K, H69K, L89M  

Database

Resources

Team