Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Rodrigues (2006)
Title Low prevalence of primary antiretroviral resistance mutations and predominance of HIV-1 clade C at polymerase gene in newly diagnosed individuals from south Brazil.
Citation Virus Res
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 97
NumPts 97
Subtype B, C, B + C, CRF31_BC, F, CRF12_BF

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BR04RS100 BR04RS100 None None T215TI  V35T, E36A, T39E, S48T, V60I, K122E, D123G, D177E, T200A, Q207K, R211K, E224ED  
BR04RS101 BR04RS101 None None   V35I, T39E, K43R, S48T, K122E, D123S, I135T, A158S, D177E, T200A, Q207E, R211K  
BR04RS103 BR04RS103 None None   K49R, I50V, D123E, I135T, I142V, K166R, D177E, T200A, R211K  
BR04RS104 BR04RS104 None None   V35T, I135V, I178M  
BR04RS105 BR04RS105 None None   V35T, E36A, T39D, K43R, S48T, K122E, A158S, K173A, D177G, T200A, I202V, Q207E  
BR04RS106 BR04RS106 None None   V35T, E36A, T39D, S48T, D121H, K122E, D123S, K173A, Q174K, D177E, R211K  
BR04RS108 BR04RS108 None None   V35T, E36A, T39D, K43R, S48T, K122E, D123G, I135T, S162C, T200I, R211K  
BR04RS109 BR04RS109 None None   K122E, D123S, I135T, T200V, Q207E, R211K, F214L  
BR04RS110 BR04RS110 None None   R211K  
BR04RS111 BR04RS111 None None   R211K  
BR04RS112 BR04RS112 None None   V35I, S48T, K49R, E53D, K102Q, D123E, I135T, K166R, Q197E, I202V, R211K  
BR04RS113 BR04RS113 None None   S48P, K122E, D123N, D177G, T200A, Q207E, R211K  
BR04RS114 BR04RS114 None None   K43R, S48T, K122E, Q207E, R211K  
BR04RS115 BR04RS115 None None   A98S, K102Q, D123E, I135T, V179I, R211K  
BR04RS116 BR04RS116 None None   S68G, K122R, D123E, I135T, Q174H, D177E, I195M, G196E, T200R, Q207E, R211K  
BR04RS119 BR04RS119 None None   V35T, E36A, T39D, S48T, K64R, K122E, D123S, I135T, T165I, Q207E, R211K  
BR04RS121 BR04RS121 None None   V35T, T39N, S48T, V60I, K122E, D123S, Q207E, R211K  
BR04RS122 BR04RS122 None None   V35T, E36A, T39D, S48T, K122E, D123S, I135T, T200A, R211K  
BR04RS123 BR04RS123 None None   V35T, E36A, T39D, K43R, S48T, A158S, K166R, K173A, D177E, T200A, Q207G, R211K  
BR04RS125 BR04RS125 None None   V35T, E36A, T39E, E40D, K43R, S48T, K122E, D123N, A158S, K173R, Q174H, D177E, T200A, Q207E, R211T  
BR04RS126 BR04RS126 None None   S68G, I135T, K166R  
BR04RS128 BR04RS128 None None   S48T, K101R, K122E, I135T, R199K, R211K  
BR04RS130 BR04RS130 None None   V35T, E36A, T39E, K43R, S48T, V118I, K122E, A158S, K173A, D177G, T200A, I202V, Q207A, R211K, F214L  
BR04RS131 BR04RS131 None None   K122E, I135T, E169D, G196E, R211K  
BR04RS132 BR04RS132 None None   V35T, E36A, T39D, S48T, K122E, D123S, I135T, S162C, I178L, R211K  
BR04RS133 BR04RS133 None None   V35T, E36A, T39D, K43R, S48T, K122E, D123S, S162A, T165I, D177E, T200A, Q207E  
BR04RS134 BR04RS134 None None   V35T, E36A, T39D, S48T, K122E, D123G, I135V, I159V, K173A, D177E, T200A, Q207E, R211K  
BR04RS136 BR04RS136 None None   K102Q, K122E, I135T, T139V, T200I, R211K, F214L  
BR04RS137 BR04RS137 None None   V35T, E36A, T39D, S48T, V60I, K122E, T165I, T200E, R211K  
BR04RS138 BR04RS138 None None   V60I, S162C  
BR04RS139 BR04RS139 None None   V35I, I135T, T200A, L210F, R211K  
BR04RS141 BR04RS141 None None   V35T, E36A, T39E, K43R, S48T, V60I, K122E, I135T, I202V, R211K, F214L  
BR04RS142 BR04RS142 None None  L100I, K103N V35I, S68G, K122E, I135T, T200A, Q207E, R211K  
BR04RS143 BR04RS143 None None   V35I, V118I, K122E, D123G, I135T, K173T, Q174K, T200A, F214L  
BR04RS145 BR04RS145 None None   K43R, S48T, K122E, D123S, I135T, S162C, E169N, K173A, Q174K, T200A, Q207E  
BR04RS146 BR04RS146 None None   V60I, D121Y, K122E, D177E, I178M  
BR04RS147 BR04RS147 None None  K101E, E138K K122E, I142V, T165I, I178M, T200A, Q207N  
BR04RS148 BR04RS148 None None   V35T, E36A, T39D, K122E, D123S, K173A, D177E, I178V, T200A, Q207E, R211K  
BR04RS149 BR04RS149 None None   V35T, E36A, T39E, E40D, K43R, S48T, V60I, D121Y, K122E, I135T, S162N, I180V, R211K, F214L  
BR04RS150 BR04RS150 None None   A158S, I195L  
BR04RS151 BR04RS151 None None   K22N, T39A, T69S, D123E, I135T, I142V, S162C, P226S  
BR04RS152 BR04RS152 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123S, I135T, I142V, R211E  
BR04RS153 BR04RS153 None None   V35T, E36A, T39E, S48T, K122E, A158S, K173A, D177G, T200A, I202V, Q207E  
BR04RS154 BR04RS154 None None   V35T, E36A, T39D, K122E, D123S, A158S, K166R, K173A, D177E, E194K, T200A, Q207E, R211K  
BR04RS156 BR04RS156 None None  V106I K122E, D123N, I135T, I142V, T200I, R211T, F214L  
BR04RS158 BR04RS158 None None   K49R, I135T, A158S, T165I  
BR04RS159 BR04RS159 None None   K122E, D123N, T139A, A158S, D177E  
BR04RS165 BR04RS165 None None   V35T, E36A, T39E, S48T, K122E, I135V, I142T, A158S, K173T, Q174K, D177E, T200A, Q207E  
BR04RS166 BR04RS166 None None   V35T, E36A, T39D, K43R, S48T, K122E, D123S, I135T, K173A, D177E, T200A, Q207A, R211K  
BR04RS168 BR04RS168 None None   V35T, E36A, T39E, K43R, S48T, K122E, D123S, T165I, K173A, D177E, I178V, T200A, Q207E, R211K, F214FL, E224ED  
BR04RS170 BR04RS170 None None   V35T, E36A, T39D, K43R, S48T, A98S, K122E, D123N, A158S, K173V, D177E, T200A, Q207K  
BR04RS172 BR04RS172 None None  E138G R83K, D123E, I135T, S162Y, I178M, V179I, R211K  
BR04RS174 BR04RS174 None None   V35T, K122E, D123E, I135V, S162C, K173A, Q174K, Q207E, R211K  
BR04RS175 BR04RS175 None None   V35I, K49R, I135T, S162C, E204D, R211K  
BR04RS176 BR04RS176 None None   V35T, E36A, T39D, K43R, S48T, D121H, K122E, D123S, K173A, D177E, I178L, T200A, Q207G, R211K  
BR04RS177 BR04RS177 None None   K122E, D123S, I135R, T200E  
BR04RS178 BR04RS178 None None   V35T, T39I, I135V, S162C, E169D, K173A, Q174K, T200A, Q207E, R211K  
BR04RS180 BR04RS180 None None   K122E, I135T, S162C, T200A, I202V  
BR04RS181 BR04RS181 None None   V35T, E36A, T39D, S48T, V60I, K101R, K122E, I135T, R211K  
BR04RS182 BR04RS182 None None   V35T, E36A, T39D, K43R, K122E, D123N, I135T, S162C, K173T, Q174K, D177E, T200A, Q207G, R211K  
BR04RS183 BR04RS183 None None   V35T, E36A, T39D, K43R, S48T, V60I, K102R, K122E, D123G, I135T, S162C, R211K  
BR04RS186 BR04RS186 None None   V35T, E36A, T39D, S48T, V60I, I135T, K166R, R211K  
BR04RS187 BR04RS187 None None   V35T, E36A, T39D, V60I, K104N, K122E, D123S, I142V, T200V, R211K  
BR04RS189 BR04RS189 None None   R211K  
BR04RS190 BR04RS190 None None   V35T, T39D, K43R, S48T, K104N, K122E, Q197K, T200A, R211K  
BR04RS191 BR04RS191 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123N, I135T, D177G, T200A, R211K, F214L  
BR04RS192 BR04RS192 None None   K122E, D123N, I135T, D177E, T200A, Q207E, R211K  
BR04RS193 BR04RS193 None None   V35T, T39N, S48T, D121H, K122A, D123S, E194D, T200A, R211K  
BR04RS194 BR04RS194 None None   R83K, D123E  
BR04RS195 BR04RS195 None None   S68G, K122E, D123S, D177E, R211K  
BR04RS196 BR04RS196 None None   V35I, V60I, K122E, D123G, I142V, S162Y, E169D, K173T, Q174K, Q197E, Q207T, R211K  
BR04RS197 BR04RS197 None None   V35I, T39D, E40D, S48T, K102R, K122E, I135M, K173A, D177E, T200A, E204K, Q207A, R211K  
BR04RS198 BR04RS198 None None   V35T, E36A, T39E, S48T, D123E, I135V, S162C, P176S, D177N, V179I, T200A, R211K  
BR04RS200 BR04RS200 None None   V35T, E36A, T39D, K43R, S48T, K122E, D123S, I135T, Q197P, R211K  
BR04RS201 BR04RS201 None None  V106I V35T, T39L, V60I, T69N, D123E, I135L, S162C, E169D, K173T, Q174K, D177E, V179I, T200A, Q207E, R211K  
BR04RS202 BR04RS202 None None   V35T, E36A, T39D, V118I, D121H, K122E, I135R, I142T, K173T, D177E, T200A, Q207E, R211K, F214L  
BR04RS204 BR04RS204 None None M41L, L210W, T215Y  D123E, I135T, I142V, I178M, Q207E  
BR04RS207 BR04RS207 None None  K103N V35L, K122E, S162C, V179I, I202V  
BR04RS208 BR04RS208 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123S, A158S, K173A, T200A, Q207R, R211Q  
BR04RS209 BR04RS209 None None   V35T, E36A, T39D, S48T, K122E, D123S, I135T, I142V, S162C, I202V, R211K  
BR04RS210 BR04RS210 None None   V35T, E36A, T39E, S48T, D121H, A158S, K173T, D177E, E194D, T200A, Q207E, R211K  
BR04RS212 BR04RS212 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123S, I135T, R211K  
BR04RS214 BR04RS214 None None   V35T, E36A, T39D, S48T, K122E, D123G, R211K  
BR04RS215 BR04RS215 None None   V35T, E36A, T39D, S48T, K122E, A158S, K173A, D177E, T200V, R211K  
BR04RS217 BR04RS217 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123G, D177E, Q197R, T200E, Q207E, R211K  
BR04RS218 BR04RS218 None None   V35T, E36A, T39D, S48T, K122E, D177G, Q197K, T200A, Q207E, R211K  
BR04RS219 BR04RS219 None None   V60I, K122E, D123N, I135T, K173R, Q174K, D177E, I178M, G196E, Q207E, F214L  
BR04RS220 BR04RS220 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123S, K173A, Q174R, D177E, I178L, T200A, Q207E, R211K  
BR04RS370 BR04RS370 None None   V35T, E36A, T39D, K43R, S48T, K49R, V60I, K122E, D123S, I135T, R211K  
BR04RS374 BR04RS374 None None   I135V, R211K  
BR04RS375 BR04RS375 None None   V35T, T39D, S48T, K122E, D123S, I135T, S162C, R211K  
BR04RS93 BR04RS93 None None   K103R, V118I, K122E, I135T, T165I, T200A, I202V, R211K  
BR04RS94 BR04RS94 None None   V35T, E36A, T39D, S48T, D121A, K122E, D177E, T200A, Q207E, R211K, K223E  
BR04RS95 BR04RS95 None None   A98S, K102Q, K122E, I135T, T200A, Q207E, R211K, K223E  
BR04RS97 BR04RS97 None None   T39D, K43R, D121H, K122E, D123GS, I135T, T139TA, S162C, D177EK, R211K V111VIM 
BR04RS98 BR04RS98 None None   V35T, E36A, T39D, S48T, V60I, K122E, D123S, I135T, I142V, Q197K, R211K  
BR04RS99 BR04RS99 None None   V35T, T39D, K122E, D123S, K173A, D177E, T200A, Q207E, R211K