Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gonzalez Perez (2003)
Title Epidemiological and molecular characteristics of HIV and HTLV infection in Equatorial Guinea, 1996-1998.
Citation Direct Genbank Submission
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 41
NumPts 41
Subtype CRF02_AG, A, D, C, F, B, H, G

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
PG_GI280 GI280 None None   K11T, V35T, T39R, K122E, D123N, A158S, K173A, Q174N, D177E, T200A, Q207T, R211S, Q242H, V245K, E248D  
PG_GI362 GI362 None None   V35T, E40D, K43R, K49R, V60I, A98S, K122E, D123S, K173I, Q174K, D177E, T200A, Q207G, R211K  
PG_GM1037 GM1037 None None   K20R, E28D, V35T, T39K, E40D, V60I, D121H, K122E, D123S, I135T, S162Y, K173L, V179I, Q207A, R211S  
PG_GM116 GM116 None None   V35T, D123E, I135V, S162C, K173A, Q174K, D177E, Q207E, V245T  
PG_GM117 GM117 None None   V35I, E36A, T39E, S48T, K102R, I135L, K173T, D177E, T200A, Q207E, V245Q  
PG_GM142 GM142 None None   E6A, V35M, K173E, R211K, K275Q, K277R  
PG_GM291 GM291 None None   V35T, D123N, I135M, T139A, S162A, K173T, Q174E, D177E, T200A, Q207E, V245Q  
PG_GM306 GM306 None None   V35T, E36D, T39M, I135V, S162A, K173T, Q174E, D177E, V189I, T200A, Q207E, F214L, E224D, V245Q, P247A, E248D  
PG_GM376 GM376 None None   V35T, E36D, T39K, K43E, K122P, S162A, K173I, Q174K, D177E, T200A, Q207E  
PG_GM380 GM380 None None   V35T, D123E, I135V, S162C, K173A, Q174K, D177E, Q207E, V245Q, D250T, A272P, K275R, Q278Y G213E 
PG_GM415 GM415 None None   V35T, E36D, T39L, K49R, T69P, I135V, S162A, K173T, Q174K, N175Y, D177E, I178M, T200A, Q207E, V245Q, K281R, T286A  
PG_GM577 GM577 None None   K20R, V21I, V35T, K49R, S68X, K70X, W71X, R72X, K73X, L74X, V75X, D76X, F77X, R78X, E79X, L80X, N81X, K82X, R83X, T84X, Q85X, D86X, F87X, W88X, E89X, V90X, Q91X, L92X, G93X, I94X, P95X, H96X, P97X, A98X, G99X, L100X, K101X, K102X, K103X, K104X, S105X, V106X, T107X, V108X, L109X, D110X, V111X, G112X, D123S, I135T, K173S, Q174K, D177G, V179I, I202V, Q207D, R211K, V245Q, E248N  
PG_GM699 GM699 None None   V35T, E36A, K64R, K122P, S162A, K173A, Q174K, D177E, T200A, Q207E  
PG_GM712 GM712 None None   V35T, E36D, V60I, K101Q, K122R, D123E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E  
PG_GM778 GM778 None None   K20R, V21I, V35T, K49R, S68X, K70X, W71X, R72X, K73X, L74X, V75X, D76X, F77X, R78X, E79X, L80X, N81X, K82X, R83X, T84X, Q85X, D86X, F87X, W88X, E89X, V90X, Q91X, L92X, G93X, I94X, P95X, H96X, P97X, A98X, G99X, L100X, K101X, K102X, K103X, K104X, S105X, V106X, T107X, V108X, L109X, D110X, V111X, G112X, D123S, I135T, K173S, Q174K, D177G, V179I, I202V, Q207D, R211K, V245Q, E248N  
PG_GM832 GM832 None None  V106I K11T, V35T, E36A, T39K, K43E, V60I, T69P, K122E, D123N, I142V, S162Y, K173S, D177E, V179I, K201R, Q207A, F214L  
PG_GP112 GP112 None None   V35T, E36D, T39L, I135V, I142V, S162A, K173T, Q174K, D177E, T200A, Q207G, P243Q, V245Q I244T 
PG_GP139 GP139 None None   V35T, E36A, T39E, S48T, I135V, T165I, K173T, D177Q, T200A, Q207E, R211K, E224K  
PG_GP15 GP15 None None   K11N, K22N, W24C, V35T, E36A, T39E, S48T, D123E, I135V, K173T, D177E, T200A, Q207E, R211K, V245R, E248K  
PG_GP212 GP212 None None   V35T, K122E, D123S, S134C, I135V, T139A, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, V245Q  
PG_GP333 GP333 None None   V35T, T39K, E40D, V60I, K122E, D123S, I135T, S162Y, K173A, D177E, V179I, Q207A  
PG_GP384 GP384 None None   V35T, T39M, V60I, T107S, D121Y, K122E, D123G, S162H, D177E, Q207A, I244V K11V 
PG_GP91 GP91 None None   V35T, E36A, T39E, S48T, K122Q, I135V, K173T, D177E, T200A, Q207E, R211K  
PG_GT1000 GT1000 None None   V21I, V35T, T39K, V60I, K122P, I135T, S162C, K166R, K173S, D177E, I178M, T200A, Q207N, R211D, E224D, V245Q  
PG_GT1056 GT1056 None None   T7A, V35T, I135V, S162A, K173T, Q174K, D177Q, T200A, R206K, Q207K, R211K, V245Q  
PG_GT1096 GT1096 None None   V35K, E36D, K43N, K49R, I50V, V60I, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L  
PG_GT1098 GT1098 None None   D123N, I135L, S162A, F171Y, K173T, Q174K, D177E, T200A, Q207E, V245Q, K277R, T286A  
PG_GT1130 GT1130 None None   K11T, V35T, E36A, T39K, K43E, K122E, D123N, K173S, Q174K, Q207A, R211S, V245Q  
PG_GT1138 GT1138 None None   V35T, E40D, K49R, V60I, V118I, K122T, T165I, D177E, I178L, E204K, Q207E, F214L, V245T  
PG_GT572 GT572 None None   K11N, V35T, E36D, E40D, V60I, I135V, S162A, K173T, Q174N, D177E, T200A, Q207E, V245K  
PG_GT576 GT576 None None   V35T, E40D, K49R, V60I, V118I, I135T, T165I, D177E, I178L, T200I, E204K, Q207E, F214L, V245T  
PG_GT598 GT598 None None   V35T, K49R, V60I, V118I, T165I, E169D, D177E, I178L, E204K, Q207E, F214L  
PG_GT652 GT652 None None   S3R, E6K, K11T, V35T, T39R, K43E, S68G, K122E, D123N, I135T, S162H, K173S, V179I, T200A, Q207A  
PG_GT703 GT703 None None   V35T, E36D, T39K, K43E, D123N, I135V, S162A, K173N, Q174K, D177E, I178M, T200A, Q207K, P243S, V245Q  
PG_GT812 GT812 None None   K20R, V35T, E36D, D123E, I135V, I159V, S162A, K173T, Q174K, D177E, T200A, Q207E  
PG_GT822 GT822 None None   V35T, V60I, K64R, K122T, D123N, I135V, S162A, K173T, Q174K, D177E, T200A, Q207K, R211K, E224D  
PG_GT825 GT825 None None   V35T, E36D, E40D, V60I, I135V, G141E, S162A, K173T, Q174N, D177E, T200A, Q207E  
PG_GT958 GT958 None None   V35T, T39K, D121Y, K122E, D123G, E169G, K173S, Q174K, D177E, T200A, Q207A, R211N, V245Q, E248D  
PG_GT970 GT970 None None   V35T, E40D, K49R, V60I, V118I, K122T, T165I, D177E, I178L, T200A, E204K, Q207E, F214L, V245T Q145W 
PG_GT975 GT975 None None   V35T, T39N, E40D, V60I, K122P, I159V, K173S, D177E, T200A, Q207E, R211Q, V245Q, A272P, E291D  
PG_GT995 GT995 None None  E138G V35T, E40D, K49R, V60I, V118I, K122P, D177E, I178L, E204N, Q207E, F214L, V245T, E248D