Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Brown (2005)
Title Biologic and genetic characterization of a panel of 60 human immunodeficiency virus type 1 isolates, representing clades A, B, C, D, CRF01_AE, and CRF02_AG, for the development and assessment of candidate vaccines.
Citation J Virol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 21
NumPts 21
Subtype CRF01_AE, C, B, A, D

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
BB_02ET_288 02ET_288 None    S24N, D25E, V31I, F100Y, L101I, T112V, T124S, T125A, K136T, G163V, K188R, G193D, S195C, V201I, K215N, T218L, L234I, D278A, S283G, D288N  
BB_85US_Ba-L 85US_Ba-L None    V88I, M154I  
BB_89SM_145 89SM_145 None    D25E, K34R, F100Y, L101I, T112V, T124N, T125A, K136H, K188R, V201I, T218I, L234I, D278A, S283G  
BB_90SE_364 90SE_364 None    D25E, V31I, M50I, L101I, T112V, T124A, T125A, K136Q, D167E, K188R, V201I, T218I, L234I, A265V, D278A, S283G  
BB_90TH_CM244 90TH_CM244 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
BB_90US_873 90US_873 None    L45V, I72V, T112I, T124A, S230N  
BB_92FR_BX08 92FR_BX08 None    E11D, K156N D256DN 
BB_92UG_029 92UG_029 None    K14R, V32I, I72V, T112V, I113V, S119P, T124A, G134N, K136Q, V201I, N222K, L234I, S283G  
BB_93MW_965 93MW_965 None    D25E, V31I, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, F181L, V201I, K211R, T218I, L234I, A265V, R269K, D278A, R284G  
BB_93RW_024 93RW_024 None    K14R, A21T, I72V, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I, A265V, S283G  
BB_93UG_065 93UG_065 None    S17N, M50L, I72V, T112V, I113V, T124A, T125A, V201I, L234I, D256E  
BB_94IN_20635-4 94IN_20635 None    V31I, K42Q, E69K, L101I, T112V, T122I, T124A, T125A, K136H, F181L, V201I, T218I, L234I, R269K, D278A  
BB_94US_33931N 94US_33931 None    V31I, E96D, L101I, G193E, V201I, S230N, D286N  
BB_96TH_M02138 96TH_02138 None    K14R, A21T, A23V, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
BB_96TH_NI1149 96TH_1149 None    K14R, A21T, V31I, S39N, L63V, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, R199K, V201I, L234I, S283G  
BB_96TH_NP1046 96TH_1046 None    K14R, A21T, V31I, V32I, M50I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, T206S, L234I, S283G  
BB_96TH_NP1538 96TH_1538 None    G70E, S119R, T124N, T125A, K211R  
BB_97TH_NP1525 97TH_1525 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G  
BB_97TH_NP1695 97TH_1695 None    K14R, A21T, V31I, S39N, L45V, I72V, T112V, T124A, T125A, V126L, G134N, I135V, K136R, D167E, V201I, L234I, S283G  
BB_98TH_NP1251 98TH_1251 None    K14R, A21T, A23V, V31I, S39N, T112V, T124A, T125A, G134N, I135V, D167E, V201I, L234I, S283G  
BB_99TH_NI1052 99TH_1052 None    K14R, A21T, V31I, S39N, I72V, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, S283G