Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Balakrishnan (2005)
Title HIV type 1 genotypic variation in an antiretroviral treatment-naive population in southern India.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 50
NumPts 50
Subtype C

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
YRG1 YRG1 None    T12X, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
YRG10 YRG10 None    T12P, I15V, L19T, M36I, R41K, L63P, H69K, I93L  
YRG11 YRG11 None    I13V, I15V, L19I, K20R, M36L, N37C, R41K, L63P, H69K, L89M, I93L  
YRG12 YRG12 None    T12P, I13V, I15V, L19I, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L  
YRG13 YRG13 None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
YRG14 YRG14 None    T12P, K14R, I15V, M36I, L63P, H69K, T74A, L89M, I93L  
YRG15 YRG15 None    T12TS, I15V, L19I, K20KR, E35D, M36I, N37DE, L63P, H69K, L89M, I93L  
YRG16 YRG16 None    T12X, I15V, L19I, M36I, N37S, P39PS, R41K, K45R, L63PT, H69K, L89M, I93L  
YRG17 YRG17 None    T12S, K14R, I15V, L19LI, M36I, R41K, L63S, H69K, V82VI, L89M, I93L  
YRG18 YRG18 None    T12S, K14R, I15V, L19I, M36I, N37D, R41K, H69K, L89M, I93L  
YRG19 YRG19 None    I13V, I15V, L19I, M36I, N37S, R41K, L63P, C67CY, H69K, K70R, L89M, I93L  
YRG2 YRG2 None    T12X, I15V, L19T, M36I, K43R, Q61E, L63T, I64M, H69K, L89M, I93L  
YRG20 YRG20 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89LM, I93L  
YRG21 YRG21 None    I13V, K14R, I15V, L19I, M36T, R41K, L63P, H69K, L89M, I93L  
YRG22 YRG22 None    T12S, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
YRG23 YRG23 None    T12S, I13X, I15V, L19I, E35D, M36I, N37E, D60E, L63P, H69K, L89M, I93L  
YRG24 YRG24 None    T12S, I15V, L19I, M36I, N37S, R41K, L63A, H69K, L89LM, I93L  
YRG25 YRG25 None    I13V, I15V, L19I, M36I, N37S, R41K, L63P, C67CY, H69K, K70KR, L89M, I93L  
YRG26 YRG26 None    T12S, K14R, I15V, L19X, M36I, R41K, K43R, I62IV, L63P, H69K, T74TS, L89M, I93L  
YRG27 YRG27 None    T12S, I13V, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89M, I93L  
YRG28 YRG28 None    K14R, I15V, L19I, M36IV, R41K, L63T, H69K, V82I, L89M, I93L  
YRG29 YRG29 None    K14R, I15V, L19I, M36I, R41K, L63A, H69K, I93L  
YRG3 YRG3 None    T12S, I15V, L19I, M36V, R41K, H69K, L89M, I93L  
YRG30 YRG30 None    I15V, L19T, K20R, M36L, N37S, R41K, L63P, H69K, V82VI, L89M, I93L  
YRG31 YRG31 None  M46I  T12S, I15V, L19I, E35Q, R41K, K55N, D60E, L63P, H69K, L89M, I93L  
YRG32 YRG32 None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
YRG33 YRG33 None    Q7X, T12S, I15V, L19X, M36I, R41K, L63P, H69K, I93L  
YRG34 YRG34 None    T12S, I15X, L19T, M36I, R41K, L63P, C67Y, H69K, I93L  
YRG35 YRG35 None    Q7X, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
YRG36 YRG36 None    Q7X, T12X, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
YRG37 YRG37 None    T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L  
YRG38 YRG38 None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, K70R, L89M, I93L  
YRG39 YRG39 None   K20T, T74TP T12P, K14E, I15K, Q18R, L19I, E21Q, M36V, N37D, R41K, L63P, H69K, V82I, L89M, I93L G17A 
YRG4 YRG4 None    M36L, N37S, R41K, L63P, H69K, K70R, L89M, I93L  
YRG40 YRG40 None    T12S, I13V, K14R, I15V, L19I, E35D, M36I, R41K, L63P, H69K, I93L  
YRG41 YRG41 None    I13V, I15V, L19I, E21K, M36L, N37S, R41K, L63P, H69K, L89LM, I93L T26K 
YRG42 YRG42 None    D25N, M36IV, R41K, L63P, H69K, V82I, L89M, I93L A22S, L24K 
YRG43 YRG43 None    T12S, I15V, L19T, M36I, R41K, L63P, H69K, L89I, I93L  
YRG44 YRG44 None    T12S, K14R, I15V, L19I, M36V, R41K, L63P, H69K, L89M, I93L  
YRG45 YRG45 None    Q7X, I15V, L19I, M36I, R41K, L63A, H69K, L89M, I93L  
YRG46 YRG46 None    T12S, G17GD, L19I, K20R, M36I, R41K, L63P, H69K, L89M, I93L  
YRG47 YRG47 None    T12S, I15V, L19I, M36L, N37H, R41K, L63P, H69K, L89M, I93L  
YRG48 YRG48 None    T12P, K14R, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
YRG49 YRG49 None    Q7X, L19I, M36I, Q61E, L63P, H69K, V82I, L89M, I93L  
YRG5 YRG5 None    T12S, I15V, L19MV, E35D, M36I, R41K, L63P, H69K, L89M, I93L, T96TA  
YRG50 YRG50 None    T12S, I15V, L19I, E35D, N37S, R41K, L63P, I64M, H69K, K70R, V82I, L89M, I93L  
YRG6 YRG6 None    T12P, I15V, G16E, L19I, M36I, N37S, R41K, L63H, H69K, P79PS, L89M, I93L  
YRG7 YRG7 None    Q7X, T12P, I15V, L19I, M36I, R41K, L63P, H69K, L89LM, I93L  
YRG8 YRG8 None    T12S, I15V, L19I, M36I, N37D, R41K, L63T, I64M, H69K, V82VI, L89M, I93L  
YRG9 YRG9 None    T12S, I15V, L19I, M36I, R41K, L63S, H69K, V82I, L89M, I93L  

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