Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Bessong (2005)
Title Characterization of human immunodeficiency virus type 1 from a previously unexplored region of South Africa with a high HIV prevalence.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 13
NumPts 13
Subtype C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
01PB12ZA 01PB12ZA None None   P14X, K22R, V35T, E36A, T39E, S48T, I135V, K173E, D177E, V179I, T200A, E204K, Q207D, R211K, V245Q, T286A, E291D, V292I, I293V, K311R  
01PB13ZA 01PB13ZA None None   V35T, E36A, T39E, S48T, K122E, K173A, D177E, T200A, Q207A, V245Q, E248N, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V, P294T  
01PB17ZA 01PB17ZA None None   V35T, T39E, S48T, K82R, A98S, D121H, K122E, K166R, K173A, Q174E, D177E, V179I, T200A, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V  
01PB18ZA 01PB18ZA None None  E138A V35T, E36A, T39E, E40D, S48T, V60I, K102Q, V118I, K122E, I135T, K173A, Q174N, D177E, T200A, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
01PB1ZA 01PB1ZA None None  E138A, Y318F V35T, E36A, T39E, E40D, S48T, V60I, K102Q, V118I, K122E, I135T, K173I, Q174K, T200A, Q207E, L210V, F214L, V245Q, E248D, S251C, A272P, K275R, K277R, Q278H, T286A, E291D, V292I, I293V  
01PB21ZA 01PB21ZA None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173A, D177E, T200A, E204K, Q207E, R211K, E224D, V245K, A272S, K277R, Q278E, T286A, E291D, V292I, I293V  
01PB22ZA 01PB22ZA None None   V35T, E36A, T39E, S48T, V60I, K104R, K122E, D123G, S162T, K166R, K173A, D177E, T200A, Q207E, R211K, V245H, A272P, E291D, V292I, I293V  
01PB23ZA 01PB23ZA None None   V35T, E36A, T39E, S48T, K122E, D123N, T139A, K173E, D177E, V179I, T200A, E204K, Q207D, R211K, V245Q, T286A, E291D, V292I, I293V, K311R  
01PB27ZA 01PB27ZA None None  E138A T27S, V35T, T39E, S48T, V60I, V118I, K122E, D123N, K173A, D177E, T200A, E204K, Q207E, R211K, E224D, V245K, A272S, K277R, Q278E, T286A, E291D, V292I, I293V  
01PB2ZA 01PB2ZA None None   K20R, V35T, T39E, E40D, S48T, V60I, K122E, D123K, I135T, K173V, Q174K, D177E, T200A, Q207E, V245Q, A272P, K277T, K281R, T286A, E291D, V292I, I293V  
01PB3ZA 01PB3ZA None None   V35T, T39E, V60I, A98S, K122E, D123G, S162C, K173A, Q174K, D177E, T200A, Q207E, V245Q, D250E, A272P, T286A, I293V  
01PB4ZA 01PB4ZA None None   V35T, E36A, T39E, S48T, V60I, K173V, Q174K, D177E, T200A, Q207E, V245Q, A272P, K277T, K281R, T286A, E291D, V292I, I293V, V314X  
01PB8ZA 01PB8ZA None None  E138A P14X, V35T, E36A, T39E, S48T, D121Y, K122E, T139A, S162C, K173A, T200A, Q207E, W212R, V245Q, A272P, K277R, Q278E, L279I, T286A, E291D, V292I, I293V