Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author McCutchan (2004)
Title HIV type 1 circulating recombinant form CRF09_cpx from west Africa combines subtypes A, F, G, and may share ancestors with CRF02_AG and Z321.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 4
NumPts 4
Subtype CRF09_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
95SN1795 95SN1795 None None   V21I, V35K, K49R, I50V, I135T, K166R, K173I, Q174K, D177E, T200A, K201T, Q207E, R211K, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, I326V, G335D, R356K, M357K, R358K, G359S, K366R, A371V, A400T, T403A, E404D, T409S, E432D, V435I, D460N, D471E, Q480H, H483Y, L491S, K512R, E514D, L517I, S519N, Q524K, K527E, A534S, A554S  
95SN7808 95SN7808 None None   V21I, V35T, T39A, I135T, S162C, F171Y, K173I, Q174K, D177G, T200A, Q207E, R211K, V245Q, E248D, A272T, T286A, E291D, V292I, I293V, P294T, L295M, I326V, G335D, T338S, R356K, M357K, R358K, G359S, A360T, K366R, A371V, I375V, A400V, T403A, E432D, V435A, L452I, D471E, Q480H, L491S, K512R, S519N, Q524E, K527G, A534S, A554S S251Y 
96GH2911 96GH2911 None None   V21I, V35T, T39A, I135V, K173I, Q174K, D177E, T200A, E203K, Q207E, R211K, V245Q, E248D, D250E, T286A, K287R, E291D, V292I, I293V, P294T, I326V, G335D, M357K, G359S, K366R, A371V, I375V, A376T, A400T, T403A, E432D, V435I, D460N, V466I, D471E, Q480H, L491S, K512R, S519N, Q524K, K527E, A534S, A554S  
99DE4057 99DE4057 None None   V21I, V35T, T39A, I135T, S162C, F171Y, Q174K, D177E, T200A, Q207E, R211K, F214L, V245E, D250E, A272P, V276I, K277R, T286A, V292I, I293V, P294T, S322A, I326V, G335D, R356K, M357K, R358K, G359S, K366R, T369A, A371V, I375V, A376T, T377L, T386A, A400T, T403A, E432D, V435I, D460N, D471E, Q480H, H483Y, L491P, K512R, L517I, S519N, Q524K, K527E, A534S, A554S