Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Eshleman (2004)
Title Comparison of nevirapine (NVP) resistance in Ugandan women 7 days vs. 6-8 weeks after single-dose nvp prophylaxis: HIVNET 012.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 141
NumPts 65
Subtype A, D, CRF35_AD, CRF05_DF, C, B, CRF01_AE, CRF45_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 141 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
ESH_Pat126 ESH1 None    I13V, G16E, E35D, R41K, L63Q, I64V, K70R, V77I  
  SE1_7d None    I13V, G16E, E35D, R41K, L63Q, I64V, K70R, V77I  
ESH_Pat128 ESH10 None    I13V, K14R, M36MI, R41K, D60E, I64V  
  SE10_7d None    I13V, K14R, M36MI, R41K, D60E, I64V  
ESH_Pat131 ESH512 None    I13V, Q18H, M36I, N37NS, R41K, L63C, I64V  
  SE512_7d None    I13V, Q18H, M36I, N37NS, R41K, L63C, I64V  
ESH_Pat138 ESH9 None    I13V, M36I, N37ND, R41K, D60E, L63P, I64V, G68GE  
  SE9_7d None    I13V, M36I, N37ND, R41K, D60E, L63P, I64V  
ESH_Pat140 ESH801 None    I13V, K14KR, G17E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, K70KR, L89M  
  SE801_7d None    I13V, K14KR, G17E, K20R, E35D, M36I, R41K, K45R, R57K, H69K, K70KR, L89M  
ESH_Pat149 ESH667 None    I13IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
  SE667_7d None    I13IV, K20R, E35D, M36I, R41K, R57K, H69K, L89M T74TIK 
ESH_Pat159 ESH22 None    I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
  SE22_7d None    I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
ESH_Pat164 ESH740 None    I13V, G16GE, M36I, R41K, I64V, I72T  
  SE740_7d None    I13V, G16GE, M36I, R41K, I64V, I72T, T96TP  
ESH_Pat22 ESH45 None    I13V, K14R, E35D, M36L, R41K, R57K, L63P, H69K, L89M  
  SE45_7d None    I13V, K14R, E35D, M36L, R41K, R57K, L63P, H69K, L89M  
ESH_Pat34 ESH698 None    T12A, K14R, R41K, L63P, H69Q, V77VI, I93L  
  SE698_7d None    T12A, K14KR, R41K, Q61QE, L63P, H69Q, V77VI, I93IL  
ESH_Pat36 ESH404 None    G16E, K20R, M36I, P39S, R41K, H69HY  
  SE404_7d None    G16E, K20R, M36I, P39S, R41K, H69HY  
ESH_Pat45 ESH51 None    I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
  SE51_7d None    I13V, K14KR, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
ESH_Pat49 ESH55 None    E35D, M36I, N37ND, R41RK, Q61QH, L63T, I64V, E65D, I72IV  
  SE55_7d None    E35D, M36I, N37ND, R41RK, L63T, I64V, E65D, I72IV  
ESH_Pat55 ESH485 None    I13V, K14R, G16GE, E35D, M36I, N37D, R41K, R57K, I62V, L63PS, H69K, L89M, T96TP  
ESH_Pat56 SE842p None    I13V, K14R, E35D, M36I, N37D, R41RK, H69K, L89M  
  ESH842 None    I13V, K14R, E35D, M36I, N37D, R41K, H69K, L89M  
  SE842_7d None    I13V, K14R, E35D, M36I, N37D, R41RK, H69K, L89M  
ESH_Pat68 ESH703 None    I13V, E35D, M36I, R41K, H69K, L89M  
  SE703_7d None    I13V, E35D, M36I, R41K, H69K, L89M  
ESH_Pat75 ESH66 None    I13V, K20R, M36I, R41K, H69K, L89M  
  SE66_7d None    I13V, K20R, M36I, R41K, H69K, L89M  
ESH_Pat76 ESH850 None    I13V, I15V, G16E, E35D, M36I, R41K, R57K, D60E, I66IV, H69K, L89M  
  SE850_7d None    I13V, I15V, G16E, E35D, M36I, R41K, R57K, D60E, H69K, L89M  
ESH_Pat84 ESH784 None    I13V, M36I, R41K, I64V, H69Y  
  SE784_7d None    I13V, M36I, R41K, I64V, H69Y  
SE13 SE13 None    I13V, K20R, M36I, R41K, I64V, I72V  
SE164 SE164p None    I13V, E35D, M36I, R41K, R57K, L63V, H69K, I72V, T74S, L89M  
  SE164_7d None    I13V, E35D, M36I, R41K, R57K, L63V, H69K, I72V, T74TS, L89M  
  SE164 None    I13V, E35D, M36I, R41K, R57K, L63V, H69K, I72V, T74S, L89M C95C* 
SE180 SE180 None    I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
SE185 SE185 None    T12A, I13V, K14R, G16E, L33I, E35D, M36I, R41K, R57K, H69K, I72R, T74A, L89M  
SE188 SE188 None    I13V, R41K, I64V, H69Y  
SE227 SE227 None    I13V, M36IL, N37NS, R41K, D60E, I62V, I64V, H69Y  
SE243 SE243 None    M36I, N37S, R41K, I64V, H69Y  
SE401 SE401 None    I13V, R41K, H69K, L89M  
SE429 SE429 None    I13V, I15IV, E35D, M36I, R41K, R57K, H69K, L89M  
SE453 SE453 None    L10LI, I13V, K14KR, I15V, M36I, R41K, L63ST, H69K, L89M  
SE463 SE463 None    I13V, K14KR, R41K, I64V, I72V  
SE474 SE474 None    E35D, M36I, R41K, L63C, I64V, I72IV  
SE490 SE490 None    I13IV, I15IV, E35D, N37ND, R41K, R57K, I64V, E65D, I72V  
SE532 SE532_7d None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
  SE532 None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
SE534 SE534 None    I13V, E35D, M36I, R41K, R57RK, L63LV, H69K, L89M  
SE545 SE545p None   T74TAP I13V, L33V, R41K, K45KR, K55KR, L63LP, H69K, L89M  
  SE545_7d None    I13V, L33V, R41K, K45R, K55KR, L63P, H69K, L89M  
  SE545 None    I13V, L33V, R41K, K45KR, K55KR, L63LP, H69K, T74TA, L89M  
SE549 SE549_7d None    L10V, T12A, I13V, M36I, R41K, D60E, L63P, I64V  
  SE549 None    L10V, T12A, I13V, M36I, R41K, D60E, L63P, I64V  
SE554 SE554 None    M36I, R41K, I64V, H69Y  
SE561 SE561 None    I13IV, K14KN, L19LI, K20KR, E35D, M36I, N37DE, R41K, H69K, K70R, L89M  
SE584 SE584 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
SE599 SE599 None    L10LV, I13V, E35D, M36I, R41K, R57K, L63M, H69R  
SE602 SE602_7d None    I13V, G16E, R41K, L63H  
  SE602 None    I13V, G16E, R41K, L63H, I72V  
SE604 SE604 None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
SE612 SE612 None    I13V, M36I, R41K, D60E, I62V, I64V, H69Q  
SE623 SE623 None    I13V, K14R, E35ED, M36I, R41K, K45R, R57K, H69K, L89M  
SE638 SE638 None    I13V, L33V, R41K, L63Q, I64V  
SE652 SE652 None    I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, K70KR, L89M  
SE676 SE676 None    R41K, L63S, I64V, H69Y  
SE681 SE681_7d None    Q7H, T12S, K14R, I15L, Q18L, M36I, R41K, L63S, H69K, L89M, I93L R8L, G16V, D29A 
  SE681 None    T12S, K14R, I15V, M36I, R41K, L63S, I64IM, H69K, L89M, I93L  
SE687 SE687 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M  
SE704 SE704 None    I13V, E35D, M36I, R41K, H69K, L89M  
SE73 SE73 None    T12TS, K14R, I15V, N37K, R41N, L63P, H69K, V77I, I93L  
SE735 SE735 None    I13V, M36I, R41K, I64V, H69HY  
SE742 SE742 None    I13V, K14R, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
SE748 SE748 None    T12A, I13V, K14KR, I15V, M36I, R41K, I64V, H69K  
SE750 SE750_7d None    G16E, M36I, R41K, K45KR, Q61X, V77VI, L89LF N83NY 
  SE750 None    G16E, M36I, R41K, K45KR, Q61X, V77VI, L89LF  
SE779 SE779 None    I13V, L19Q, M36I, R41K, I64V  
SE790 SE790p None    I13V, E35D, M36I, R41K, H69K, L89M  
  SE790_7d None    I13V, E35D, M36I, R41K, H69K, L89M  
  SE790 None    I13V, E35D, M36I, R41K, H69K, L89M  
SE807 SE807 None    I13V, K14R, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
SE816 SE816_7d None    L10V, I13V, K20R, M36I, R41K, L63P  
  SE816 None    L10V, I13V, K20R, M36I, R41K, L63P  
SE827 SE827_7d None    I13V, K14KR, R41K, I64V, H69Y  
  SE827 None    I13V, K14KR, R41K, I64V, H69Y  
SE841 SE841 None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
SE847 SE847p None    I13V, E35D, M36I, R41K, R57RK, H69K, L89M  
  SE847_7d None    I13V, E35D, M36I, R41K, H69K, L89M  
  SE847 None    I13V, E35D, M36I, R41K, H69K, L89M  
SE868 SE868 None    I13V, M36I, R41K, I62V, L63AS, I64IV, E65ED, H69Y  
SE871 SE871_7d None    L10V, E35D, M36I, R41K, K45KR, L63LP, H69K, L89M  
  SE871 None    L10V, E35D, M36I, R41K, K45KR, L63LP, H69K, K70R, L89M  
SE879 SE879 None    I13V, E35D, M36I, R41K, R57K, L63LP, H69K, L89M