Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Vergne (2003)
Title Low rate of genotypic HIV-1 drug-resistant strains in the Senegalese government initiative of access to antiretroviral therapy.
Citation AIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 45
NumPts 39
Subtype CRF02_AG, A, C, B, G, D, J

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
VL00SN101hald 99SN101 IDV    L63A, Q92H  
  00SN101 IDV    N37D, L63A  
VL00SN21HALD 00SN21 IDV    I64V  
VL00SN42HPD 00SN42 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, I72M, L89M  
VL00SN58HALD 00SN58 None    L10V, I13V, K14R, I15V, G16E, L19I, K20I, M36I, P39S, R41K, H69K, I72M, L89M  
VL00SN69HPD 00SN69 IDV  I84V G73S, L89T I13V, E35D, M36I, R41K, K45R, R57K, L63P, H69K, A71V  
VL01SN160HALD 01SN160 IDV   N88D T12S, I15V, E35D, M36I, R41K, Q61N, I62V, L63P, A71T Q7L 
VL01SN201HALD 01SN201 None    I13V, G17E, K20I, M36I, R41K, I64L, H69K, L89M  
VL01SN55HPD 01SN55 None    G16E, E35D, M36I, R41K, Y59H, Q61N  
VL01SN63HPD 01SN63 IDV  M46I, V82T L89V L10I, I13V, K14R, K20I, E35D, M36I, R41K, L63P, C67E, H69K  
VL98SN10Hald 98SN10 None    I13V, L19K, K20I, M36I, P39T, R41K, Q61E, L63C, H69K, K70R, V82I, L89M  
VL98SN1264SC 98SN1264 None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
VL98SN34hald 98SN34 IDV    I13V, I15L, K20I, M36I, R41K, I64M, H69K, L89M  
  01SN34 IDV    I13V, I15L, K20I, M36I, R41K, I64M, H69K, L89M  
VL98SN46HALD 98SN46 IDV    I13V, K14R, G17E, K20I, M36I, N37S, R41K, I64M, H69K, L89M  
  00SN46 IDV    I13V, K14R, G17E, K20I, M36I, R41K, I64M, H69K, L89M  
VL98SN53HALD 98SN53 None    K14R, E35D, M36I, R41K, R57K, H69K, L89M  
  00SN53 None    T12K, I13V, K14R, G17E, K20I, M36I, N37D, R41K, I64M, H69K, K70R, L89M  
VL98SN5hald 98SN5 None    I13V, K14R, L33V, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
VL98SN65HALD 98SN65 None    L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R, L89M  
  00SN65 IDV   L89V L10V, I13V, L19P, K20I, M36I, R41K, H69K, K70R  
VL98SN66HPD 98SN66 None    T12S, I15V, L19I, M36I, R41K, L63A, H69K, I93L  
VL98SN68HPD 98SN68 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, L63P, C67E, H69K, V82I, L89M, I93V  
VL98SN71HPD 98SN71 None    I13V, L19P, K20I, M36I, R41K, L63P, H69K, K70R, L89M  
VL98SN77HALD 98SN77 None    I13V, I15V, K20I, M36I, R41K, L63P, H69K, L89M  
VL98SN78hald 98SN78 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  
VL99SN105hald 99SN105 None    I13V, K20I, M36I, R41K, H69K, L89M  
VL99SN123HALD 99SN123 None    I13V, K20I, E35K, M36I, N37E, R41K, H69K, V77I, L89M  
VL99SN125HPD 99SN125 None    L10I, T12A, I13V, E35D, M36I, R41K, K45R, L63P, H69K, K70R, L89M, T91I  
VL99SN127hpd 99SN127 None    T12A, I13V, G16E, K20M, E35D, M36I, R41K, R57K, L63H, H69K, L89M  
VL99SN133HALD 99SN133 None    L10I, I13V, I15L, K20I, M36I, R41K, L63V, H69K, L89M  
VL99SN142HPD 99SN142 None    T12S, I15V, L19T, K20R, M36I, R41K, Q61E, L63S, H69K, L89M, I93L  
VL99SN159HALD 99SN159 None    K14R, I15V, M36I, N37K, R41N, H69K, V82I, L89M, I93L  
VL99SN167HPD 99SN167 None    I13V, K14R, L19P, K20I, M36I, R41K, L63P, H69K, L89M  
VL99SN20HALD 99SN20 IDV    I64V  
VL99SN27hald 99SN27 None    I13A, K20V, M36I, R41K, H69K, L89M  
VL99SN51HPD 99SN51 None    I15V, M36I, N37D, R41K, Q61E, L63P, I66V, C67E, H69K, L89I, I93L D60S 
VL99SN61HPD 99SN61 None    I13V, K14R, E35D, M36I, N37D, R41K, K45R, R57K, L63P, H69K, L89M  
VL99SN74HALD 99SN74-2 None    I13V, K20I, M36I, R41K, I64M, H69K, L89M  
  99SN74-1 None    I13A, K20I, M36I, R41K, H69K, L89M  
VL99SN82HPD 99SN82 None    I13V, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
VL99SN86hpd 99SN86 None    T12S, K14R, I15V, L19V, K20R, M36I, R41K, L63V, H69K, L89M  
VL99SN87hald 99SN87 None    L10V, I13V, K14R, L19P, K20I, M36I, R41K, H69K, L89M  
VL99SN90hald 99SN90 None    T12A, I13V, K20I, M36I, R41K, I64V, H69K, L89M  
VL99SN97HALD 99SN97 None    I13V, K14R, K20I, M36I, R41K, H69K, L89M  

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