Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Vaughan (2003)
Title Characterization of HIV type 1 clades in the Caribbean using pol gene sequences.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 71
NumPts 71
Subtype B, C

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
VHE_Pat1 VHE126prrt None    M36I, D60E, Q61D, L63P, I72T  
VHE_Pat10 VHE141prrt None    T12P, I13V, I15V, G16E, N37C, R41K, D60E, I62V, L63T, I64V, I72V, V77I  
VHE_Pat11 VHE097prrt None    N37S, R41K, L63H  
VHE_Pat12 VHE042prrt None    L10I, I13V, Q18H, R41K, L63S, A71T, V77I  
VHE_Pat13 VHE030prrt None    E35D, M36I, R57K, D60E, Q61E, L63P  
VHE_Pat14 VHE038prrt None    P39Q, R41K, D60E, L63P, I64V, H69Y  
VHE_Pat15 VHE119prrt None    N37S, R41K, L63P, I93L  
VHE_Pat16 VHE011prrt None    E35D, M36I, R41K, D60E, Q61E, I62V  
VHE_Pat17 VHE021prrt None    K14R, I15V, L19Q, E35D, M36I, D60E, Q61E, L63P  
VHE_Pat18 VHE033prrt None    I15V, N37S, R41K, D60E, I64V, V77I  
VHE_Pat19 VHE013prrt None    L10V, R41K, I64V  
VHE_Pat2 VHE144prrt None    L19Q, R41K, L63Q, I64L, V77I, I93L  
VHE_Pat20 VHE026prrt None    L10V, K14R, M36I, R41K, I64V  
VHE_Pat21 VHE125prrt None    L10I, I13V, E35D, M36I, R41K, I64V, C67G  
VHE_Pat22 VHE113prrt None    P39Q, R41K, D60E, L63P, H69Y, I72V  
VHE_Pat23 VHE100prrt None    N37S, R41K, L63P, K70R  
VHE_Pat24 VHE143prrt None    L63H, K70T, I72V, V82I  
VHE_Pat25 VHE046prrt None    T12P, I15V, L19Q, E35D, M36I, D60E, Q61E, L63P  
VHE_Pat26 VHE106prrt None    L19Q, L63P, I64L  
VHE_Pat27 VHE140prrt None    I13V, N37C, R41K, D60E, I62V, L63A, I64V  
VHE_Pat28 VHE035prrt None    I62V  
VHE_Pat29 VHE121prrt None    T12P, K14R, M36I, N37S, R41K, R57K, L63P, I93L  
VHE_Pat3 VHE041prrt None    E35D, N37D, D60E, I64V  
VHE_Pat30 VHE014prrt None    E35D, N37D, R57RK, D60E, L63R, K70T  
VHE_Pat31 VHE031prrt None    I15V, L19Q, E35D, M36L, D60E, Q61E, L63P, A71T  
VHE_Pat32 VHE001prrt None    L19I, N37S, R41K, R57K, L63T, K70R, A71T, I93L  
VHE_Pat33 VHE018prrt None    I15V, P39S, R41K, R57K, D60E, L63P, V77I  
VHE_Pat34 VHE132prrt None    L19I, P39Q, L63A, H69Y, V77I  
VHE_Pat35 VHE136prrt None    G16A, L63S  
VHE_Pat36 VHE004prrt None    E35D, M36I, R57K, D60E, Q61E, L63P, I64V, I72V, I93L  
VHE_Pat37 VHE007prrt None    L63P  
VHE_Pat38 VHE124prrt None    N37S, R57RK, I62V, L63P  
VHE_Pat39 VHE123prrt None    N37S, L63P, I64IM, E65D, V77I  
VHE_Pat4 VHE101prrt None    I15L, L19I, L33I, L63P, I93L  
VHE_Pat40 VHE137prrt None    E35D, N37Y, R57K, L63P, K70T, I72V, V77I  
VHE_Pat41 VHE111prrt None    M36I, N37S, R41K, L63P, I64V, K70R  
VHE_Pat42 VHE105prrt None    E35D, N37D, R57K, D60E, L63P  
VHE_Pat43 VHE005prrt None    K14R, N37S, R41K  
VHE_Pat44 VHE043prrt None    T12A, E35D, N37H, R41K, L63P, H69Q, A71T, V77I  
VHE_Pat45 VHE112prrt None    M36I, N37S, R41K, L63P, K70R  
VHE_Pat46 VHE117prrt None    T12P, K14R, I15V, E35D, R41K, L63P, V77I, I93L  
VHE_Pat47 VHE034prrt None    I15V, Q18L, E35D, M36I, D60E, Q61E, I62V, L63P  
VHE_Pat48 VHE131prrt None    I13V, M36I, N37S, R41K, Q61H, I62V, L63P, H69Y, I72E  
VHE_Pat49 VHE135prrt None    N37S, R41K, I62IV, L63S, V77VI  
VHE_Pat5 VHE104prrt None    K14R, M36I, N37S, R41K, I62V, L63P  
VHE_Pat50 VHE037prrt None    I15V, E35D, N37S, R41K, K45KR, R57K, D60E, L63P  
VHE_Pat51 VHE002prrt None    K14R, I15V, N37S, R41K, L63LP  
VHE_Pat52 VHE129prrt None   K43T Q18H, N37NS, R41K, L63A, K70R, A71T  
VHE_Pat53 VHE039prrt None    I15V, E35D, N37S, R41K, L63A  
VHE_Pat54 VHE027prrt None    I15V, N37S, R41K, L63P, E65D, V82I  
VHE_Pat55 VHE139prrt None    I13V, L19Q, N37C, R57K, L63P  
VHE_Pat56 VHE032prrt None    G16E, M36V, N37S, R41K  
VHE_Pat57 VHE023prrt None    T12K, R41K, L63S, E65ED, V77I  
VHE_Pat58 VHE108prrt None    T12TI, K14KR, L19I, E35DN, N37D, R57K, I62V, L63P  
VHE_Pat59 VHE109prrt None    K14R, G16A, L63S, I72T, V77I  
VHE_Pat6 VHE116prrt None    K20R, N37NS, R41K, L63P  
VHE_Pat60 VHE025prrt None    E35D, N37D, D60E, L63P  
VHE_Pat61 VHE006prrt None    M36I, N37S, R57K, I62V, L63P  
VHE_Pat62 VHE098prrt None    I15V, L19I, E35D, V82I  
VHE_Pat63 VHE022prrt None    R41K, L63P, V77I, I93L  
VHE_Pat64 VHE040prrt None    K14R, N37S, R41K, L63P  
VHE_Pat65 VHE003prrt None    N37S, R41K, Q61H, I72V  
VHE_Pat66 VHE133prrt None    T12S, I15V, L19T, M36I, R41K, D60E, L63P, H69K, L89I, I93L  
VHE_Pat67 VHE028prrt None    N37T, L63P, I64L, H69Q, V77I  
VHE_Pat68 VHE045prrt None    N37S, R41K, L63P, K70R  
VHE_Pat69 VHE128prrt None    I13V, R41K, Q61H, I72E  
VHE_Pat7 VHE024prrt None    I15V, L19I, E35D, M36I, R41K, K45R, L63A, I93L  
VHE_Pat70 VHE102prrt None    T12A, I62V, L63S, I64V  
VHE_Pat71 VHE017prrt None    I15V, L19Q, N37S, R41K, L63P  
VHE_Pat8 VHE103prrt None    E35D, N37S, R41K, I64V, H69Y, K70R  
VHE_Pat9 VHE130prrt None    V11VI, I13IV, K14R, N37S, R41K, Q61N, I72V, V77I