Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Chaix (2003)
Title Stable prevalence of genotypic drug resistance mutations but increase in non-B virus among patients with primary HIV-1 infection in France.
Citation AIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 244
NumPts 244
Subtype B, CRF02_AG, A, C, CRF06_cpx, CRF12_BF, G, CRF11_cpx, F, CRF18_cpx, CRF01_AE, A + G


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Page 1   listing Isolate 1 to Isolate 100 from Total 244 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CML_Pat1 CML1 None None   I50V, R83K, A98S, E169D  
CML_Pat10 CML10 None None     
CML_Pat100 CML100 None None   I135T, T200I, F214L  
CML_Pat11 CML11 None None   V60I, D121Y, K122E, I135M, S162A, D177E, V179I, T200X, E204D, Q207E  
CML_Pat12 CML12 None None   I50V, R83K, K101R, K122E, D123E, I135T, S162C, R211K  
CML_Pat13 CML13 None None   E204D, R211K  
CML_Pat14 CML14 None None   K103R, K122E, I135T, K173Q, F214L  
CML_Pat15 CML15 None None M184V, L210W, T215Y  D123E, A158S, D177E, I178M, R211K, D218X Y56I 
CML_Pat16 CML16 None None   D123E, I135V, S162A, K173I, Q174E, D177E, T200A, Q207E  
CML_Pat17 CML17 None None  V106I V60I, I135T, I142T, F214L  
CML_Pat18 CML18 None None D67N, K70R, F116Y, Q151M, M184V, T215V, K219Q K103N, V108I T69N, V118I, K122E, I135T, G196E, F214L  
CML_Pat19 CML19 None None   D123E, I142T, I202V, R211K, F214L  
CML_Pat2 CML2 None None   K122Q, I135L, I142T, D177E, I178M, T200A, R211S  
CML_Pat20 CML20 None None   K49R, V60I, D121Y, K122E, I135R, S162A, D177E, T200A, E204N, Q207E  
CML_Pat21 CML21 None None   K122E, A158S  
CML_Pat22 CML22 None None   I135V, S162A, E169Q, K173T, Q174N, D177E, V189I, T200A, Q207E, R211K, F214L  
CML_Pat23 CML23 None None   S48T, D123E, Y127X, I135T, G196E, Q207E  
CML_Pat24 CML24 None None   I142V, K166R, E203D, R211K  
CML_Pat25 CML25 None None   I135V, S162A, K173T, Q174K, D177E, Q197K, T200A, Q207E, R211K  
CML_Pat26 CML26 None None M41L, M184V, T215F  K49R, R83K, K101R, D123E, G152X, D177E, G196E, Q207E N54S 
CML_Pat27 CML27 None None   V60I, K122E, I135V, I142V, R211A  
CML_Pat28 CML28 None None   V60I, I135T, R211K, F214L  
CML_Pat29 CML29 None None   Q207G, R211K, F214FL  
CML_Pat3 CML3 None None M41L, M184V, T215Y  I142V, Q174H, T200A, Q207E, L210LF, R211K  
CML_Pat30 CML30 None None   E79ED, K122E, D123S, I135T, D192DE, Q207A, L210F, R211K  
CML_Pat31 CML31 None None K219Q V106VIL K104KN, D123E, F130FL, N175X, I178ILV, G196E, Q207G, R211K  
CML_Pat32 CML32 None None   S48T, D123E, S162C, Q207E, R211K  
CML_Pat33 CML33 None None   K64R, K122E, K173E, D177N, T200A  
CML_Pat34 CML34 None None   T69N, K122E, D123E, I135M, A158S, I180V, T200I, R211K, F214L  
CML_Pat35 CML35 None None   I135T, Q207E, R211K  
CML_Pat36 CML36 None None   K49R, S162C  
CML_Pat37 CML37 None None   V60I, D121H, K122E, I135T, K173A, Q174K, D177E, E203D, Q207A, R211S  
CML_Pat38 CML38 None None   I135V, R211Q  
CML_Pat39 CML39 None None   D123E, I142V, T165I, D177E  
CML_Pat4 CML4 None None   D123E, Q207E  
CML_Pat40 CML40 None None   A98S, D123E, K166R, D177E, R211K  
CML_Pat41 CML41 None None   I135T, S162A, K173S, D177E, V179I, Q207A, R211K  
CML_Pat42 CML42 None None   Q174N, D177N, T200I  
CML_Pat43 CML43 None None   K64R, K122Q, D177E, R211K Q161P 
CML_Pat44 CML44 None None   K49R, K122A, I135V, P176X, D177E, Q197K, T200A, Q207E, R211S P157~, A158~, I159~, F160~, Q161~, S162~, S163~, M164~, T165~, K166~, I167~, L168~, E169~, P170~, F171~, R172~, K173~, Q174~, N175~ 
CML_Pat45 CML45 None None   D123E, I142M, I178M  
CML_Pat46 CML46 None None   D123E, P170S, K173E, Q174K, I178M, R211K  
CML_Pat47 CML47 None None  V179E V60I, K122E, I135T, S162C, D192E, G196E, T200E Q161K, S163K, H198K 
CML_Pat48 CML48 None None   R83K, D123E, I135T, K154X, G196E, T200I G155~, S156~ 
CML_Pat49 CML49 None None T215S  A98S, I142M, Q207A, R211K  
CML_Pat5 CML5 None None F77FL  D123E, I135T, I142IM, I159ILV, F160X, K166R, E169D, I178L, R211K, F214X  
CML_Pat50 CML50 None None   D121H, K122E, I135T, S162C, T200A, R211K P217T 
CML_Pat51 CML51 None None D67N, T215C, K219Q  V60I, K102Q, K103R, S162C, Q174A, T200A, Q207D, R211K  
CML_Pat52 CML52 None None D67DE  D123E, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E V75E 
CML_Pat53 CML53 None None   K101R, S162A, K173T, Q174E, D177E, T200A, I202V, Q207E, R211K  
CML_Pat54 CML54 None None   D177X, Q197L, T200E, R211K  
CML_Pat55 CML55 None None   V90I, K122E, D123N, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, L210I, R211K  
CML_Pat56 CML56 None None   I50V, V60I, R83K, I178L, R211K  
CML_Pat57 CML57 None None   K122E, D123S, A158S, K173T, Q174K, D177E, T200A, Q207E  
CML_Pat58 CML58 None None   I142T, K166R, G196E  
CML_Pat59 CML59 None None   K122E, D123E, I135T, Q174H, Q207H, R211K, F214L  
CML_Pat6 CML6 None None   E44K, I47F, S48Q, K49R, I135T, Q145QH, S162C, R211X K126KN 
CML_Pat60 CML60 None None   K122E, D123S, Q207N, R211K  
CML_Pat61 CML61 None None M41L, L74V, M184V, L210W, T215Y L100I, K103N K43Q, V90I, K122E, I142T, I202V, R211K  
CML_Pat62 CML62 None None   V60I, D121Y, K122E, D123E, K166R, I178M, Q197E, R211K  
CML_Pat63 CML63 None None   K122E, I135T, R211S, F214L  
CML_Pat64 CML64 None None   K43X, G45X, E53X, N57NK, T58X, P59X, I63X, R72X, D86X, Q91X, K122X, Y127X, T128X, F130FL, S134X, I135V, N136X, N137X, P140X, I142X, R143RS, Y144X, Q145X, N147X, V148X, G152X, A158X, S162X, T165X, I167X, L168X, E169X, K173A, Q174K, P176X, D177E, I178M, T200A, Q207K, R211E, T216X V60IM, I94IM, S105S*L, L120LIV, Y146Y*, K154KN, R172RS, N175NK, G196GRW 
CML_Pat65 CML65 None None   K49R, I50V, V60I, K122E, I135V, S162A, K173A, D177E, V179I, T200P, Q207A  
CML_Pat66 CML66 None None   I195L, G196E, F214L  
CML_Pat67 CML67 None None   K122E, D123E, S162C, D177E, G196E  
CML_Pat68 CML68 None None  K103N K122E, I142V  
CML_Pat69 CML69 None None   E204D, Q207R, R211Q  
CML_Pat7 CML7 None None   Q207K  
CML_Pat70 CML70 None None   V60I, K64R, K122E, D123N, I142V, D177E, Q207E  
CML_Pat71 CML71 None None   S68G, K166X, T200X, E204ED R211RGW 
CML_Pat72 CML72 None None   V60I, S68G, I135T, G196E, T200I, R211G  
CML_Pat73 CML73 None None   V60I, K122E, D123N, I142T, K166R, K173Q, Q174R, D177E, I178M, T200V, Q207D, R211K  
CML_Pat74 CML74 None None   V60I, K64R, K122E, D123N, I142V, D177E, Q207E  
CML_Pat75 CML75 None None   V60I, R83K, D123E, I135V, I178L  
CML_Pat76 CML76 None None M184V  D123E, I135T, S162C, Q207K, R211S  
CML_Pat77 CML77 None None   D121H, K122E, I142V, D177E, R211K  
CML_Pat78 CML78 None None   K122E, D123N, I142V, Q197E I167IM 
CML_Pat79 CML79 None None   K122E, D123N, Q174R, N175H, I202V, Q207G, R211K, F214L  
CML_Pat8 CML8 None None   K102Q, D177E, I178M, R211K  
CML_Pat80 CML80 None None   V60I, D123E, V179I, T200I  
CML_Pat81 CML81 None None   D123E, D177E, T200A, R211K  
CML_Pat82 CML82 None None   D123E, I135V, T139L, S162A, K173T, Q174K, D177E, T200A, Q207E  
CML_Pat83 CML83 None None   K122E, D123S, D177E  
CML_Pat84 CML84 None None   K49R, R83K, E169D, Q207E, R211K  
CML_Pat85 CML85 None None   D177E, I178M, T200A, R211K  
CML_Pat86 CML86 None None T215C Y181C E44ED, K49R, V60VIL, R83K, I135V, E169D, G196E, R211A, D218DE  
CML_Pat87 CML87 None None M41L, T215Y K103N, E138Q E44D, D121DE, K122E, I135T, S162C, Q207E, L210X, R211K G141GRW 
CML_Pat88 CML88 None None   K64R, K122R, D177E, R199X, R211K  
CML_Pat89 CML89 None None   K64KN, Q91QH, I135ILV, Q174H, Q182QH, E194X, G196E, T200R, E203ED Q151QH, S162*CW, I167IM, R211RGW 
CML_Pat9 CML9 None None   S48T, K49R, R83K, D123E, R211K  
CML_Pat90 CML90 None None D67N V179D, Y181C V90I, D121Y, K122E, I135L, I142V, S162C, G196E, E203K, R211G L209P 
CML_Pat91 CML91 None None   D123E, S162A, Q174H, D177E, G196E, I202V, Q207E, F214L  
CML_Pat92 CML92 None None  E138A I135T, I202V, R211K, F214L  
CML_Pat93 CML93 None None   K49R, R83K, I135V, I178L  
CML_Pat94 CML94 None None   R83K, D123E, T200I, R211K  
CML_Pat95 CML95 None None   V60I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E  
CML_Pat96 CML96 None None  V106I K46E, K166R, R211Q, F214L  
CML_Pat97 CML97 None None   K104R, K122E, D123S, I142T, S162C, P176T, T200A, R211S  
CML_Pat98 CML98 None None   R211K  
CML_Pat99 CML99 None None   S48T, K122E, D123S, A158S, K173A, D177E, E194D, G196K, T200A, I202V, Q207E, R211K