Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Huang (2003)
Title Sequence characterization of the protease and partial reverse transcriptase proteins of the NED panel, an international HIV type 1 subtype reference and standards panel.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 42
NumPts 42
Subtype B, CRF01_AE, C, F, CRF02_AG, D, G, A, CRF35_AD, CRF18_cpx

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
42368 42368 None    I13V, I15V, E35D, M36I, R41K, H69K, L89M  
93US141 93US141 None    L19I, E35D, L63P  
93US143 93US143 None    L10I, N37S, I62V, L63S, I64M, V77I  
93US144 93US144 None      
BCFDioum BCFDioum None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M  
BCFKITA BCFKITA None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
BCIR07 BCIR07 None    T12S, I15V, E35D, M36I, R41K, R57K, L63T, E65D, I72T, L89M  
BCIR08 BCIR08 None    T12S, I15V, K20R, E35D, M36I, R41K, R57K, L63T, E65D, L89M  
BK132 BK132 None    I64V, V77I, I93L  
BZ126 BZ126 None    I15V, K20R, E35D, M36I, P39Q, R41K, R57K, Q61N, L89M  
BZ162 BZ162 None    I15V, E35D, M36I, R41K, R57K, Q61N, L63X, E65ED, I72IT, L89M  
BZ163 BZ163 None    I15V, E35D, M36I, R41K, R57K, Q61N, L89M  
BZ167 BZ167 None    I13V, L63P  
CM235 CM235 None    I13V, E35D, M36I, R41K, H69K, K70R, L89M  
CM237 CM237 None    L10LI, I13V, R41K  
CM238 CM238 None    I13IV, E35D, M36I, R41K, H69K, L89M  
CM240 CM240 None    L5LF, I13V, E35D, M36I, R41K, R57K, L63LHP, I64IV, H69K, L89M Q58QP 
CM243 CM243 None  M46L  I13V, E35D, M36I, R41K, K55R, H69K, L89M  
DJ258 DJ258 None    I13V, K14R, L19LP, K20I, M36I, R41K, H69K, K70R, L89M  
DJ259 DJ259 None    I15V, M36I, R41K, H69K, L89IM, I93L  
DJ263 DJ263 None    I13V, K20I, M36I, R41K, H69K, L89M  
ETH2220 ETH2220 None    M36I, R41K, I64L, H69K, L89M, I93L  
HH8793 HH8793 None    I13V, K20I, E35D, M36I, N37K, R41K, C67S, H69K, V77I, V82I, L89M  
ID12 ID12 None    I13V, E35D, M36I, R41K, H69K, L89M  
ID17 ID17 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
NP03 NP03 None    I13V, K20KR, E35D, M36I, N37D, R41K, H69K, V82VI, L89M  
NP1465 NP1465 None    I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
POC30506 POC30506 None    I13V, I15V, E35D, M36I, R41K, R57K, H69K, L89M  
POC44951 POC44951 None    I13V, K14R, K20I, E35D, M36I, N37E, L63P, H69K, L89M, F99L  
SE364 SE364 None    L19LI, M36I, R41K, L63P, H69K, L89M, I93L  
SE365 SE365 None    L10V, T12A, I13V, E35D, M36I, P39PS, R41K, R57K, Q61N, L89M  
SM145 SM145 None    T12S, I15V, L19I, E35D, M36I, R41K, L63P, H69K, T74S, L89M, I93L  
UG268 UG268 None    T12TS, I13IV, I15V, M36I, R41K, L63ST, H69K, L89M, I93L  
UG270 UG270 None    M36I, N37D, R41K, I64V D60*E, H69HL, N83T 
UG273 UG273 None    I13V, K20R, E35D, M36I, R41K, R57K, H69K, L89M  
UG274 UG274 None    I13IV, M36I, R41K, I64V  
UG275 UG275 None    L10I, I13L, E35D, M36I, R41K, H69K, L89M  
US1 US1 None    T12S, L63P  
US2 US2 None    M36V, N37S  
US3 US3 None    M36I, L63P  
US4 US4 None    I13V, N37S, R41K, R57K, D60E, I64V  
ZAM18 ZAM18 None    T12S, I15V, L19T, M36I, N37S, R41K, H69K, L89M, I93L