This file contains kappa values by drug Comparison between ANRS and ANRS for 3TC SN IR HR SN 1013 0 0 IR 0 18 0 HR 0 0 1014 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for 3TC SN IR HR SN 961 52 0 IR 0 18 0 HR 0 7 1007 Kappa value is 0.971 ***************************************************************** Comparison between ANRS and Rega for 3TC SN IR HR SN 882 131 0 IR 0 13 5 HR 0 7 1007 Kappa value is 0.930 ***************************************************************** Comparison between ANRS and VGI for 3TC SN IR HR SN 979 34 0 IR 0 18 0 HR 3 0 1011 Kappa value is 0.980 ***************************************************************** Comparison between HIVDB and ANRS for 3TC SN IR HR SN 961 0 0 IR 52 18 7 HR 0 0 1007 Kappa value is 0.971 ***************************************************************** Comparison between HIVDB and HIVDB for 3TC SN IR HR SN 961 0 0 IR 0 77 0 HR 0 0 1007 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for 3TC SN IR HR SN 880 81 0 IR 2 70 5 HR 0 0 1007 Kappa value is 0.957 ***************************************************************** Comparison between HIVDB and VGI for 3TC SN IR HR SN 961 0 0 IR 21 52 4 HR 0 0 1007 Kappa value is 0.988 ***************************************************************** Comparison between Rega and ANRS for 3TC SN IR HR SN 882 0 0 IR 131 13 7 HR 0 5 1007 Kappa value is 0.930 ***************************************************************** Comparison between Rega and HIVDB for 3TC SN IR HR SN 880 2 0 IR 81 70 0 HR 0 5 1007 Kappa value is 0.957 ***************************************************************** Comparison between Rega and Rega for 3TC SN IR HR SN 882 0 0 IR 0 151 0 HR 0 0 1012 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for 3TC SN IR HR SN 882 0 0 IR 100 47 4 HR 0 5 1007 Kappa value is 0.947 ***************************************************************** Comparison between VGI and ANRS for 3TC SN IR HR SN 979 0 3 IR 34 18 0 HR 0 0 1011 Kappa value is 0.980 ***************************************************************** Comparison between VGI and HIVDB for 3TC SN IR HR SN 961 21 0 IR 0 52 0 HR 0 4 1007 Kappa value is 0.988 ***************************************************************** Comparison between VGI and Rega for 3TC SN IR HR SN 882 100 0 IR 0 47 5 HR 0 4 1007 Kappa value is 0.947 ***************************************************************** Comparison between VGI and VGI for 3TC SN IR HR SN 982 0 0 IR 0 52 0 HR 0 0 1011 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for 3TC: ANRS HIVDB Rega VGI ANRS 1.000 0.971 0.930 0.980 HIVDB 0.971 1.000 0.957 0.988 Rega 0.930 0.957 1.000 0.947 VGI 0.980 0.988 0.947 1.000 The average kappa is 0.962 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for ABC SN IR HR SN 1401 0 0 IR 0 506 0 HR 0 0 138 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for ABC SN IR HR SN 588 798 15 IR 0 159 347 HR 0 6 132 Kappa value is 0.325 ***************************************************************** Comparison between ANRS and Rega for ABC SN IR HR SN 688 538 175 IR 0 130 376 HR 0 14 124 Kappa value is 0.316 ***************************************************************** Comparison between ANRS and VGI for ABC SN IR HR SN 965 316 120 IR 0 75 431 HR 0 8 130 Kappa value is 0.438 ***************************************************************** Comparison between HIVDB and ANRS for ABC SN IR HR SN 588 0 0 IR 798 159 6 HR 15 347 132 Kappa value is 0.325 ***************************************************************** Comparison between HIVDB and HIVDB for ABC SN IR HR SN 588 0 0 IR 0 963 0 HR 0 0 494 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for ABC SN IR HR SN 588 0 0 IR 100 630 233 HR 0 52 442 Kappa value is 0.777 ***************************************************************** Comparison between HIVDB and VGI for ABC SN IR HR SN 588 0 0 IR 377 381 205 HR 0 18 476 Kappa value is 0.675 ***************************************************************** Comparison between Rega and ANRS for ABC SN IR HR SN 688 0 0 IR 538 130 14 HR 175 376 124 Kappa value is 0.316 ***************************************************************** Comparison between Rega and HIVDB for ABC SN IR HR SN 588 100 0 IR 0 630 52 HR 0 233 442 Kappa value is 0.777 ***************************************************************** Comparison between Rega and Rega for ABC SN IR HR SN 688 0 0 IR 0 682 0 HR 0 0 675 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for ABC SN IR HR SN 626 61 1 IR 320 215 147 HR 19 123 533 Kappa value is 0.638 ***************************************************************** Comparison between VGI and ANRS for ABC SN IR HR SN 965 0 0 IR 316 75 8 HR 120 431 130 Kappa value is 0.438 ***************************************************************** Comparison between VGI and HIVDB for ABC SN IR HR SN 588 377 0 IR 0 381 18 HR 0 205 476 Kappa value is 0.675 ***************************************************************** Comparison between VGI and Rega for ABC SN IR HR SN 626 320 19 IR 61 215 123 HR 1 147 533 Kappa value is 0.638 ***************************************************************** Comparison between VGI and VGI for ABC SN IR HR SN 965 0 0 IR 0 399 0 HR 0 0 681 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for ABC: ANRS HIVDB Rega VGI ANRS 1.000 0.325 0.316 0.438 HIVDB 0.325 1.000 0.777 0.675 Rega 0.316 0.777 1.000 0.638 VGI 0.438 0.675 0.638 1.000 The average kappa is 0.528 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for APV SN IR HR SN 1725 0 0 IR 0 0 0 HR 0 0 320 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for APV SN IR HR SN 1178 493 54 IR 0 0 0 HR 0 130 190 Kappa value is 0.479 ***************************************************************** Comparison between ANRS and Rega for APV SN IR HR SN 1079 452 194 IR 0 0 0 HR 0 3 317 Kappa value is 0.491 ***************************************************************** Comparison between ANRS and VGI for APV SN IR HR SN 1350 180 195 IR 0 0 0 HR 1 0 319 Kappa value is 0.611 ***************************************************************** Comparison between HIVDB and ANRS for APV SN IR HR SN 1178 0 0 IR 493 0 130 HR 54 0 190 Kappa value is 0.479 ***************************************************************** Comparison between HIVDB and HIVDB for APV SN IR HR SN 1178 0 0 IR 0 623 0 HR 0 0 244 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for APV SN IR HR SN 1049 129 0 IR 30 307 286 HR 0 19 225 Kappa value is 0.718 ***************************************************************** Comparison between HIVDB and VGI for APV SN IR HR SN 1170 8 0 IR 181 168 274 HR 0 4 240 Kappa value is 0.710 ***************************************************************** Comparison between Rega and ANRS for APV SN IR HR SN 1079 0 0 IR 452 0 3 HR 194 0 317 Kappa value is 0.491 ***************************************************************** Comparison between Rega and HIVDB for APV SN IR HR SN 1049 30 0 IR 129 307 19 HR 0 286 225 Kappa value is 0.718 ***************************************************************** Comparison between Rega and Rega for APV SN IR HR SN 1079 0 0 IR 0 455 0 HR 0 0 511 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for APV SN IR HR SN 1065 14 0 IR 274 102 79 HR 12 64 435 Kappa value is 0.743 ***************************************************************** Comparison between VGI and ANRS for APV SN IR HR SN 1350 0 1 IR 180 0 0 HR 195 0 319 Kappa value is 0.611 ***************************************************************** Comparison between VGI and HIVDB for APV SN IR HR SN 1170 181 0 IR 8 168 4 HR 0 274 240 Kappa value is 0.710 ***************************************************************** Comparison between VGI and Rega for APV SN IR HR SN 1065 274 12 IR 14 102 64 HR 0 79 435 Kappa value is 0.743 ***************************************************************** Comparison between VGI and VGI for APV SN IR HR SN 1351 0 0 IR 0 180 0 HR 0 0 514 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for APV: ANRS HIVDB Rega VGI ANRS 1.000 0.479 0.491 0.611 HIVDB 0.479 1.000 0.718 0.710 Rega 0.491 0.718 1.000 0.743 VGI 0.611 0.710 0.743 1.000 The average kappa is 0.625 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for AZT SN IR HR SN 1069 0 0 IR 0 0 0 HR 0 0 976 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for AZT SN IR HR SN 949 120 0 IR 0 0 0 HR 6 464 506 Kappa value is 0.706 ***************************************************************** Comparison between ANRS and Rega for AZT SN IR HR SN 971 70 28 IR 0 0 0 HR 42 110 824 Kappa value is 0.843 ***************************************************************** Comparison between ANRS and VGI for AZT SN IR HR SN 904 165 0 IR 0 0 0 HR 0 5 971 Kappa value is 0.917 ***************************************************************** Comparison between HIVDB and ANRS for AZT SN IR HR SN 949 0 6 IR 120 0 464 HR 0 0 506 Kappa value is 0.706 ***************************************************************** Comparison between HIVDB and HIVDB for AZT SN IR HR SN 955 0 0 IR 0 584 0 HR 0 0 506 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for AZT SN IR HR SN 949 6 0 IR 64 173 347 HR 0 1 505 Kappa value is 0.787 ***************************************************************** Comparison between HIVDB and VGI for AZT SN IR HR SN 884 65 6 IR 20 105 459 HR 0 0 506 Kappa value is 0.724 ***************************************************************** Comparison between Rega and ANRS for AZT SN IR HR SN 971 0 42 IR 70 0 110 HR 28 0 824 Kappa value is 0.843 ***************************************************************** Comparison between Rega and HIVDB for AZT SN IR HR SN 949 64 0 IR 6 173 1 HR 0 347 505 Kappa value is 0.787 ***************************************************************** Comparison between Rega and Rega for AZT SN IR HR SN 1013 0 0 IR 0 180 0 HR 0 0 852 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for AZT SN IR HR SN 904 67 42 IR 0 70 110 HR 0 33 819 Kappa value is 0.856 ***************************************************************** Comparison between VGI and ANRS for AZT SN IR HR SN 904 0 0 IR 165 0 5 HR 0 0 971 Kappa value is 0.917 ***************************************************************** Comparison between VGI and HIVDB for AZT SN IR HR SN 884 20 0 IR 65 105 0 HR 6 459 506 Kappa value is 0.724 ***************************************************************** Comparison between VGI and Rega for AZT SN IR HR SN 904 0 0 IR 67 70 33 HR 42 110 819 Kappa value is 0.856 ***************************************************************** Comparison between VGI and VGI for AZT SN IR HR SN 904 0 0 IR 0 170 0 HR 0 0 971 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for AZT: ANRS HIVDB Rega VGI ANRS 1.000 0.706 0.843 0.917 HIVDB 0.706 1.000 0.787 0.724 Rega 0.843 0.787 1.000 0.856 VGI 0.917 0.724 0.856 1.000 The average kappa is 0.805 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for D4T SN IR HR SN 1156 0 0 IR 0 5 0 HR 0 0 884 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for D4T SN IR HR SN 982 174 0 IR 0 3 2 HR 5 622 257 Kappa value is 0.585 ***************************************************************** Comparison between ANRS and Rega for D4T SN IR HR SN 1038 77 41 IR 0 3 2 HR 231 181 472 Kappa value is 0.586 ***************************************************************** Comparison between ANRS and VGI for D4T SN IR HR SN 1055 101 0 IR 0 5 0 HR 1 231 652 Kappa value is 0.832 ***************************************************************** Comparison between HIVDB and ANRS for D4T SN IR HR SN 982 0 5 IR 174 3 622 HR 0 2 257 Kappa value is 0.585 ***************************************************************** Comparison between HIVDB and HIVDB for D4T SN IR HR SN 987 0 0 IR 0 799 0 HR 0 0 259 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for D4T SN IR HR SN 987 0 0 IR 282 257 260 HR 0 4 255 Kappa value is 0.674 ***************************************************************** Comparison between HIVDB and VGI for D4T SN IR HR SN 982 5 0 IR 74 329 396 HR 0 3 256 Kappa value is 0.730 ***************************************************************** Comparison between Rega and ANRS for D4T SN IR HR SN 1038 0 231 IR 77 3 181 HR 41 2 472 Kappa value is 0.586 ***************************************************************** Comparison between Rega and HIVDB for D4T SN IR HR SN 987 282 0 IR 0 257 4 HR 0 260 255 Kappa value is 0.674 ***************************************************************** Comparison between Rega and Rega for D4T SN IR HR SN 1269 0 0 IR 0 261 0 HR 0 0 515 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for D4T SN IR HR SN 1038 222 9 IR 17 67 177 HR 1 48 466 Kappa value is 0.739 ***************************************************************** Comparison between VGI and ANRS for D4T SN IR HR SN 1055 0 1 IR 101 5 231 HR 0 0 652 Kappa value is 0.832 ***************************************************************** Comparison between VGI and HIVDB for D4T SN IR HR SN 982 74 0 IR 5 329 3 HR 0 396 256 Kappa value is 0.730 ***************************************************************** Comparison between VGI and Rega for D4T SN IR HR SN 1038 17 1 IR 222 67 48 HR 9 177 466 Kappa value is 0.739 ***************************************************************** Comparison between VGI and VGI for D4T SN IR HR SN 1056 0 0 IR 0 337 0 HR 0 0 652 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for D4T: ANRS HIVDB Rega VGI ANRS 1.000 0.585 0.586 0.832 HIVDB 0.585 1.000 0.674 0.730 Rega 0.586 0.674 1.000 0.739 VGI 0.832 0.730 0.739 1.000 The average kappa is 0.691 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for DDI SN IR HR SN 1356 0 0 IR 0 4 0 HR 0 0 685 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for DDI SN IR HR SN 648 698 10 IR 0 4 0 HR 0 406 279 Kappa value is 0.416 ***************************************************************** Comparison between ANRS and Rega for DDI SN IR HR SN 736 620 0 IR 0 0 4 HR 62 443 180 Kappa value is 0.353 ***************************************************************** Comparison between ANRS and VGI for DDI SN IR HR SN 736 602 18 IR 0 0 4 HR 3 68 614 Kappa value is 0.644 ***************************************************************** Comparison between HIVDB and ANRS for DDI SN IR HR SN 648 0 0 IR 698 4 406 HR 10 0 279 Kappa value is 0.416 ***************************************************************** Comparison between HIVDB and HIVDB for DDI SN IR HR SN 648 0 0 IR 0 1108 0 HR 0 0 289 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for DDI SN IR HR SN 648 0 0 IR 149 944 15 HR 1 119 169 Kappa value is 0.791 ***************************************************************** Comparison between HIVDB and VGI for DDI SN IR HR SN 648 0 0 IR 90 657 361 HR 1 13 275 Kappa value is 0.720 ***************************************************************** Comparison between Rega and ANRS for DDI SN IR HR SN 736 0 62 IR 620 0 443 HR 0 4 180 Kappa value is 0.353 ***************************************************************** Comparison between Rega and HIVDB for DDI SN IR HR SN 648 149 1 IR 0 944 119 HR 0 15 169 Kappa value is 0.791 ***************************************************************** Comparison between Rega and Rega for DDI SN IR HR SN 798 0 0 IR 0 1063 0 HR 0 0 184 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for DDI SN IR HR SN 732 62 4 IR 4 603 456 HR 3 5 176 Kappa value is 0.675 ***************************************************************** Comparison between VGI and ANRS for DDI SN IR HR SN 736 0 3 IR 602 0 68 HR 18 4 614 Kappa value is 0.644 ***************************************************************** Comparison between VGI and HIVDB for DDI SN IR HR SN 648 90 1 IR 0 657 13 HR 0 361 275 Kappa value is 0.720 ***************************************************************** Comparison between VGI and Rega for DDI SN IR HR SN 732 4 3 IR 62 603 5 HR 4 456 176 Kappa value is 0.675 ***************************************************************** Comparison between VGI and VGI for DDI SN IR HR SN 739 0 0 IR 0 670 0 HR 0 0 636 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for DDI: ANRS HIVDB Rega VGI ANRS 1.000 0.416 0.353 0.644 HIVDB 0.416 1.000 0.791 0.720 Rega 0.353 0.791 1.000 0.675 VGI 0.644 0.720 0.675 1.000 The average kappa is 0.600 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for DLV SN IR HR SN 1440 0 0 IR 0 0 0 HR 0 0 605 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for DLV SN IR HR SN 1391 29 20 IR 0 0 0 HR 23 40 542 Kappa value is 0.909 ***************************************************************** Comparison between ANRS and Rega for DLV SN IR HR SN 1335 53 52 IR 0 0 0 HR 0 25 580 Kappa value is 0.896 ***************************************************************** Comparison between ANRS and VGI for DLV SN IR HR SN 1344 84 12 IR 0 0 0 HR 0 30 575 Kappa value is 0.921 ***************************************************************** Comparison between HIVDB and ANRS for DLV SN IR HR SN 1391 0 23 IR 29 0 40 HR 20 0 542 Kappa value is 0.909 ***************************************************************** Comparison between HIVDB and HIVDB for DLV SN IR HR SN 1414 0 0 IR 0 69 0 HR 0 0 562 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for DLV SN IR HR SN 1322 63 29 IR 13 15 41 HR 0 0 562 Kappa value is 0.900 ***************************************************************** Comparison between HIVDB and VGI for DLV SN IR HR SN 1333 81 0 IR 11 24 34 HR 0 9 553 Kappa value is 0.922 ***************************************************************** Comparison between Rega and ANRS for DLV SN IR HR SN 1335 0 0 IR 53 0 25 HR 52 0 580 Kappa value is 0.896 ***************************************************************** Comparison between Rega and HIVDB for DLV SN IR HR SN 1322 13 0 IR 63 15 0 HR 29 41 562 Kappa value is 0.900 ***************************************************************** Comparison between Rega and Rega for DLV SN IR HR SN 1335 0 0 IR 0 78 0 HR 0 0 632 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for DLV SN IR HR SN 1330 5 0 IR 0 78 0 HR 14 31 587 Kappa value is 0.964 ***************************************************************** Comparison between VGI and ANRS for DLV SN IR HR SN 1344 0 0 IR 84 0 30 HR 12 0 575 Kappa value is 0.921 ***************************************************************** Comparison between VGI and HIVDB for DLV SN IR HR SN 1333 11 0 IR 81 24 9 HR 0 34 553 Kappa value is 0.922 ***************************************************************** Comparison between VGI and Rega for DLV SN IR HR SN 1330 0 14 IR 5 78 31 HR 0 0 587 Kappa value is 0.964 ***************************************************************** Comparison between VGI and VGI for DLV SN IR HR SN 1344 0 0 IR 0 114 0 HR 0 0 587 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for DLV: ANRS HIVDB Rega VGI ANRS 1.000 0.909 0.896 0.921 HIVDB 0.909 1.000 0.900 0.922 Rega 0.896 0.900 1.000 0.964 VGI 0.921 0.922 0.964 1.000 The average kappa is 0.919 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for EFV SN IR HR SN 1408 0 0 IR 0 0 0 HR 0 0 637 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for EFV SN IR HR SN 1373 32 3 IR 0 0 0 HR 9 110 518 Kappa value is 0.904 ***************************************************************** Comparison between ANRS and Rega for EFV SN IR HR SN 1324 72 12 IR 0 0 0 HR 0 96 541 Kappa value is 0.891 ***************************************************************** Comparison between ANRS and VGI for EFV SN IR HR SN 1319 89 0 IR 0 0 0 HR 0 169 468 Kappa value is 0.850 ***************************************************************** Comparison between HIVDB and ANRS for EFV SN IR HR SN 1373 0 9 IR 32 0 110 HR 3 0 518 Kappa value is 0.904 ***************************************************************** Comparison between HIVDB and HIVDB for EFV SN IR HR SN 1382 0 0 IR 0 142 0 HR 0 0 521 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for EFV SN IR HR SN 1319 63 0 IR 4 96 42 HR 1 9 511 Kappa value is 0.930 ***************************************************************** Comparison between HIVDB and VGI for EFV SN IR HR SN 1316 66 0 IR 2 131 9 HR 1 61 459 Kappa value is 0.916 ***************************************************************** Comparison between Rega and ANRS for EFV SN IR HR SN 1324 0 0 IR 72 0 96 HR 12 0 541 Kappa value is 0.891 ***************************************************************** Comparison between Rega and HIVDB for EFV SN IR HR SN 1319 4 1 IR 63 96 9 HR 0 42 511 Kappa value is 0.930 ***************************************************************** Comparison between Rega and Rega for EFV SN IR HR SN 1324 0 0 IR 0 168 0 HR 0 0 553 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for EFV SN IR HR SN 1319 5 0 IR 0 167 1 HR 0 86 467 Kappa value is 0.946 ***************************************************************** Comparison between VGI and ANRS for EFV SN IR HR SN 1319 0 0 IR 89 0 169 HR 0 0 468 Kappa value is 0.850 ***************************************************************** Comparison between VGI and HIVDB for EFV SN IR HR SN 1316 2 1 IR 66 131 61 HR 0 9 459 Kappa value is 0.916 ***************************************************************** Comparison between VGI and Rega for EFV SN IR HR SN 1319 0 0 IR 5 167 86 HR 0 1 467 Kappa value is 0.946 ***************************************************************** Comparison between VGI and VGI for EFV SN IR HR SN 1319 0 0 IR 0 258 0 HR 0 0 468 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for EFV: ANRS HIVDB Rega VGI ANRS 1.000 0.904 0.891 0.850 HIVDB 0.904 1.000 0.930 0.916 Rega 0.891 0.930 1.000 0.946 VGI 0.850 0.916 0.946 1.000 The average kappa is 0.906 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for IDV SN IR HR SN 1174 0 0 IR 0 85 0 HR 0 0 786 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for IDV SN IR HR SN 1147 27 0 IR 0 84 1 HR 14 394 378 Kappa value is 0.760 ***************************************************************** Comparison between ANRS and Rega for IDV SN IR HR SN 823 338 13 IR 3 65 17 HR 0 30 756 Kappa value is 0.795 ***************************************************************** Comparison between ANRS and VGI for IDV SN IR HR SN 1174 0 0 IR 0 82 3 HR 0 184 602 Kappa value is 0.903 ***************************************************************** Comparison between HIVDB and ANRS for IDV SN IR HR SN 1147 0 14 IR 27 84 394 HR 0 1 378 Kappa value is 0.760 ***************************************************************** Comparison between HIVDB and HIVDB for IDV SN IR HR SN 1161 0 0 IR 0 505 0 HR 0 0 379 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for IDV SN IR HR SN 820 324 17 IR 6 109 390 HR 0 0 379 Kappa value is 0.608 ***************************************************************** Comparison between HIVDB and VGI for IDV SN IR HR SN 1147 14 0 IR 27 251 227 HR 0 1 378 Kappa value is 0.847 ***************************************************************** Comparison between Rega and ANRS for IDV SN IR HR SN 823 3 0 IR 338 65 30 HR 13 17 756 Kappa value is 0.795 ***************************************************************** Comparison between Rega and HIVDB for IDV SN IR HR SN 820 6 0 IR 324 109 0 HR 17 390 379 Kappa value is 0.608 ***************************************************************** Comparison between Rega and Rega for IDV SN IR HR SN 826 0 0 IR 0 433 0 HR 0 0 786 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for IDV SN IR HR SN 823 3 0 IR 338 95 0 HR 13 168 605 Kappa value is 0.729 ***************************************************************** Comparison between VGI and ANRS for IDV SN IR HR SN 1174 0 0 IR 0 82 184 HR 0 3 602 Kappa value is 0.903 ***************************************************************** Comparison between VGI and HIVDB for IDV SN IR HR SN 1147 27 0 IR 14 251 1 HR 0 227 378 Kappa value is 0.847 ***************************************************************** Comparison between VGI and Rega for IDV SN IR HR SN 823 338 13 IR 3 95 168 HR 0 0 605 Kappa value is 0.729 ***************************************************************** Comparison between VGI and VGI for IDV SN IR HR SN 1174 0 0 IR 0 266 0 HR 0 0 605 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for IDV: ANRS HIVDB Rega VGI ANRS 1.000 0.760 0.795 0.903 HIVDB 0.760 1.000 0.608 0.847 Rega 0.795 0.608 1.000 0.729 VGI 0.903 0.847 0.729 1.000 The average kappa is 0.774 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for LPV SN IR HR SN 1763 0 0 IR 0 251 0 HR 0 0 31 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for LPV SN IR HR SN 1228 535 0 IR 0 245 6 HR 0 17 14 Kappa value is 0.396 ***************************************************************** Comparison between ANRS and Rega for LPV SN IR HR SN 1610 153 0 IR 0 151 100 HR 0 0 31 Kappa value is 0.665 ***************************************************************** Comparison between ANRS and VGI for LPV SN IR HR SN 1409 336 18 IR 0 78 173 HR 0 0 31 Kappa value is 0.449 ***************************************************************** Comparison between HIVDB and ANRS for LPV SN IR HR SN 1228 0 0 IR 535 245 17 HR 0 6 14 Kappa value is 0.396 ***************************************************************** Comparison between HIVDB and HIVDB for LPV SN IR HR SN 1228 0 0 IR 0 797 0 HR 0 0 20 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for LPV SN IR HR SN 1228 0 0 IR 382 302 113 HR 0 2 18 Kappa value is 0.528 ***************************************************************** Comparison between HIVDB and VGI for LPV SN IR HR SN 1228 0 0 IR 181 414 202 HR 0 0 20 Kappa value is 0.676 ***************************************************************** Comparison between Rega and ANRS for LPV SN IR HR SN 1610 0 0 IR 153 151 0 HR 0 100 31 Kappa value is 0.665 ***************************************************************** Comparison between Rega and HIVDB for LPV SN IR HR SN 1228 382 0 IR 0 302 2 HR 0 113 18 Kappa value is 0.528 ***************************************************************** Comparison between Rega and Rega for LPV SN IR HR SN 1610 0 0 IR 0 304 0 HR 0 0 131 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for LPV SN IR HR SN 1406 204 0 IR 3 208 93 HR 0 2 129 Kappa value is 0.732 ***************************************************************** Comparison between VGI and ANRS for LPV SN IR HR SN 1409 0 0 IR 336 78 0 HR 18 173 31 Kappa value is 0.449 ***************************************************************** Comparison between VGI and HIVDB for LPV SN IR HR SN 1228 181 0 IR 0 414 0 HR 0 202 20 Kappa value is 0.676 ***************************************************************** Comparison between VGI and Rega for LPV SN IR HR SN 1406 3 0 IR 204 208 2 HR 0 93 129 Kappa value is 0.732 ***************************************************************** Comparison between VGI and VGI for LPV SN IR HR SN 1409 0 0 IR 0 414 0 HR 0 0 222 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for LPV: ANRS HIVDB Rega VGI ANRS 1.000 0.396 0.665 0.449 HIVDB 0.396 1.000 0.528 0.676 Rega 0.665 0.528 1.000 0.732 VGI 0.449 0.676 0.732 1.000 The average kappa is 0.574 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for NFV SN IR HR SN 1122 0 0 IR 0 102 0 HR 0 0 821 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for NFV SN IR HR SN 1008 79 35 IR 0 5 97 HR 0 176 645 Kappa value is 0.789 ***************************************************************** Comparison between ANRS and Rega for NFV SN IR HR SN 686 358 78 IR 0 1 101 HR 0 22 799 Kappa value is 0.692 ***************************************************************** Comparison between ANRS and VGI for NFV SN IR HR SN 1052 18 52 IR 0 1 101 HR 3 4 814 Kappa value is 0.885 ***************************************************************** Comparison between HIVDB and ANRS for NFV SN IR HR SN 1008 0 0 IR 79 5 176 HR 35 97 645 Kappa value is 0.789 ***************************************************************** Comparison between HIVDB and HIVDB for NFV SN IR HR SN 1008 0 0 IR 0 260 0 HR 0 0 777 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for NFV SN IR HR SN 682 319 7 IR 4 59 197 HR 0 3 774 Kappa value is 0.735 ***************************************************************** Comparison between HIVDB and VGI for NFV SN IR HR SN 1008 0 0 IR 47 22 191 HR 0 1 776 Kappa value is 0.882 ***************************************************************** Comparison between Rega and ANRS for NFV SN IR HR SN 686 0 0 IR 358 1 22 HR 78 101 799 Kappa value is 0.692 ***************************************************************** Comparison between Rega and HIVDB for NFV SN IR HR SN 682 4 0 IR 319 59 3 HR 7 197 774 Kappa value is 0.735 ***************************************************************** Comparison between Rega and Rega for NFV SN IR HR SN 686 0 0 IR 0 381 0 HR 0 0 978 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for NFV SN IR HR SN 686 0 0 IR 358 2 21 HR 11 21 946 Kappa value is 0.794 ***************************************************************** Comparison between VGI and ANRS for NFV SN IR HR SN 1052 0 3 IR 18 1 4 HR 52 101 814 Kappa value is 0.885 ***************************************************************** Comparison between VGI and HIVDB for NFV SN IR HR SN 1008 47 0 IR 0 22 1 HR 0 191 776 Kappa value is 0.882 ***************************************************************** Comparison between VGI and Rega for NFV SN IR HR SN 686 358 11 IR 0 2 21 HR 0 21 946 Kappa value is 0.794 ***************************************************************** Comparison between VGI and VGI for NFV SN IR HR SN 1055 0 0 IR 0 23 0 HR 0 0 967 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for NFV: ANRS HIVDB Rega VGI ANRS 1.000 0.789 0.692 0.885 HIVDB 0.789 1.000 0.735 0.882 Rega 0.692 0.735 1.000 0.794 VGI 0.885 0.882 0.794 1.000 The average kappa is 0.796 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for NVP SN IR HR SN 1395 0 0 IR 0 0 0 HR 0 0 650 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for NVP SN IR HR SN 1369 17 9 IR 0 0 0 HR 8 18 624 Kappa value is 0.961 ***************************************************************** Comparison between ANRS and Rega for NVP SN IR HR SN 1310 45 40 IR 0 0 0 HR 0 8 642 Kappa value is 0.927 ***************************************************************** Comparison between ANRS and VGI for NVP SN IR HR SN 1319 76 0 IR 0 0 0 HR 0 12 638 Kappa value is 0.951 ***************************************************************** Comparison between HIVDB and ANRS for NVP SN IR HR SN 1369 0 8 IR 17 0 18 HR 9 0 624 Kappa value is 0.961 ***************************************************************** Comparison between HIVDB and HIVDB for NVP SN IR HR SN 1377 0 0 IR 0 35 0 HR 0 0 633 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for NVP SN IR HR SN 1301 47 29 IR 8 6 21 HR 1 0 632 Kappa value is 0.925 ***************************************************************** Comparison between HIVDB and VGI for NVP SN IR HR SN 1313 64 0 IR 5 14 16 HR 1 10 622 Kappa value is 0.946 ***************************************************************** Comparison between Rega and ANRS for NVP SN IR HR SN 1310 0 0 IR 45 0 8 HR 40 0 642 Kappa value is 0.927 ***************************************************************** Comparison between Rega and HIVDB for NVP SN IR HR SN 1301 8 1 IR 47 6 0 HR 29 21 632 Kappa value is 0.925 ***************************************************************** Comparison between Rega and Rega for NVP SN IR HR SN 1310 0 0 IR 0 53 0 HR 0 0 682 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for NVP SN IR HR SN 1305 5 0 IR 0 53 0 HR 14 30 638 Kappa value is 0.966 ***************************************************************** Comparison between VGI and ANRS for NVP SN IR HR SN 1319 0 0 IR 76 0 12 HR 0 0 638 Kappa value is 0.951 ***************************************************************** Comparison between VGI and HIVDB for NVP SN IR HR SN 1313 5 1 IR 64 14 10 HR 0 16 622 Kappa value is 0.946 ***************************************************************** Comparison between VGI and Rega for NVP SN IR HR SN 1305 0 14 IR 5 53 30 HR 0 0 638 Kappa value is 0.966 ***************************************************************** Comparison between VGI and VGI for NVP SN IR HR SN 1319 0 0 IR 0 88 0 HR 0 0 638 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for NVP: ANRS HIVDB Rega VGI ANRS 1.000 0.961 0.927 0.951 HIVDB 0.961 1.000 0.925 0.946 Rega 0.927 0.925 1.000 0.966 VGI 0.951 0.946 0.966 1.000 The average kappa is 0.946 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for RTV SN IR HR SN 1353 0 0 IR 0 185 0 HR 0 0 507 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for RTV SN IR HR SN 1162 190 1 IR 0 183 2 HR 0 140 367 Kappa value is 0.800 ***************************************************************** Comparison between ANRS and Rega for RTV SN IR HR SN 826 410 117 IR 0 21 164 HR 0 2 505 Kappa value is 0.593 ***************************************************************** Comparison between ANRS and VGI for RTV SN IR HR SN 1174 160 19 IR 0 88 97 HR 0 18 489 Kappa value is 0.825 ***************************************************************** Comparison between HIVDB and ANRS for RTV SN IR HR SN 1162 0 0 IR 190 183 140 HR 1 2 367 Kappa value is 0.800 ***************************************************************** Comparison between HIVDB and HIVDB for RTV SN IR HR SN 1162 0 0 IR 0 513 0 HR 0 0 370 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for RTV SN IR HR SN 820 324 18 IR 6 109 398 HR 0 0 370 Kappa value is 0.602 ***************************************************************** Comparison between HIVDB and VGI for RTV SN IR HR SN 1147 15 0 IR 27 250 236 HR 0 1 369 Kappa value is 0.841 ***************************************************************** Comparison between Rega and ANRS for RTV SN IR HR SN 826 0 0 IR 410 21 2 HR 117 164 505 Kappa value is 0.593 ***************************************************************** Comparison between Rega and HIVDB for RTV SN IR HR SN 820 6 0 IR 324 109 0 HR 18 398 370 Kappa value is 0.602 ***************************************************************** Comparison between Rega and Rega for RTV SN IR HR SN 826 0 0 IR 0 433 0 HR 0 0 786 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for RTV SN IR HR SN 823 3 0 IR 338 95 0 HR 13 168 605 Kappa value is 0.729 ***************************************************************** Comparison between VGI and ANRS for RTV SN IR HR SN 1174 0 0 IR 160 88 18 HR 19 97 489 Kappa value is 0.825 ***************************************************************** Comparison between VGI and HIVDB for RTV SN IR HR SN 1147 27 0 IR 15 250 1 HR 0 236 369 Kappa value is 0.841 ***************************************************************** Comparison between VGI and Rega for RTV SN IR HR SN 823 338 13 IR 3 95 168 HR 0 0 605 Kappa value is 0.729 ***************************************************************** Comparison between VGI and VGI for RTV SN IR HR SN 1174 0 0 IR 0 266 0 HR 0 0 605 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for RTV: ANRS HIVDB Rega VGI ANRS 1.000 0.800 0.593 0.825 HIVDB 0.800 1.000 0.602 0.841 Rega 0.593 0.602 1.000 0.729 VGI 0.825 0.841 0.729 1.000 The average kappa is 0.732 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for SQV SN IR HR SN 1333 0 0 IR 0 71 0 HR 0 0 641 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for SQV SN IR HR SN 1235 98 0 IR 0 71 0 HR 0 295 346 Kappa value is 0.773 ***************************************************************** Comparison between ANRS and Rega for SQV SN IR HR SN 944 329 60 IR 0 4 67 HR 0 10 631 Kappa value is 0.733 ***************************************************************** Comparison between ANRS and VGI for SQV SN IR HR SN 1261 72 0 IR 2 69 0 HR 0 5 636 Kappa value is 0.957 ***************************************************************** Comparison between HIVDB and ANRS for SQV SN IR HR SN 1235 0 0 IR 98 71 295 HR 0 0 346 Kappa value is 0.773 ***************************************************************** Comparison between HIVDB and HIVDB for SQV SN IR HR SN 1235 0 0 IR 0 464 0 HR 0 0 346 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for SQV SN IR HR SN 943 289 3 IR 1 54 409 HR 0 0 346 Kappa value is 0.626 ***************************************************************** Comparison between HIVDB and VGI for SQV SN IR HR SN 1235 0 0 IR 28 146 290 HR 0 0 346 Kappa value is 0.817 ***************************************************************** Comparison between Rega and ANRS for SQV SN IR HR SN 944 0 0 IR 329 4 10 HR 60 67 631 Kappa value is 0.733 ***************************************************************** Comparison between Rega and HIVDB for SQV SN IR HR SN 943 1 0 IR 289 54 0 HR 3 409 346 Kappa value is 0.626 ***************************************************************** Comparison between Rega and Rega for SQV SN IR HR SN 944 0 0 IR 0 343 0 HR 0 0 758 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for SQV SN IR HR SN 944 0 0 IR 311 25 7 HR 8 121 629 Kappa value is 0.768 ***************************************************************** Comparison between VGI and ANRS for SQV SN IR HR SN 1261 2 0 IR 72 69 5 HR 0 0 636 Kappa value is 0.957 ***************************************************************** Comparison between VGI and HIVDB for SQV SN IR HR SN 1235 28 0 IR 0 146 0 HR 0 290 346 Kappa value is 0.817 ***************************************************************** Comparison between VGI and Rega for SQV SN IR HR SN 944 311 8 IR 0 25 121 HR 0 7 629 Kappa value is 0.768 ***************************************************************** Comparison between VGI and VGI for SQV SN IR HR SN 1263 0 0 IR 0 146 0 HR 0 0 636 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for SQV: ANRS HIVDB Rega VGI ANRS 1.000 0.773 0.733 0.957 HIVDB 0.773 1.000 0.626 0.817 Rega 0.733 0.626 1.000 0.768 VGI 0.957 0.817 0.768 1.000 The average kappa is 0.779 ***************************************************************** ***************************************************************** Comparison between ANRS and ANRS for TDF SN IR HR SN 1519 0 0 IR 0 10 0 HR 0 0 516 Kappa value is 1.000 ***************************************************************** Comparison between ANRS and HIVDB for TDF SN IR HR SN 1269 250 0 IR 0 6 4 HR 9 501 6 Kappa value is 0.455 ***************************************************************** Comparison between ANRS and Rega for TDF SN IR HR SN 1348 171 0 IR 0 0 10 HR 0 502 14 Kappa value is 0.509 ***************************************************************** Comparison between ANRS and VGI for TDF SN IR HR SN 1243 276 0 IR 0 5 5 HR 3 199 314 Kappa value is 0.694 ***************************************************************** Comparison between HIVDB and ANRS for TDF SN IR HR SN 1269 0 9 IR 250 6 501 HR 0 4 6 Kappa value is 0.455 ***************************************************************** Comparison between HIVDB and HIVDB for TDF SN IR HR SN 1278 0 0 IR 0 757 0 HR 0 0 10 Kappa value is 1.000 ***************************************************************** Comparison between HIVDB and Rega for TDF SN IR HR SN 1216 62 0 IR 132 611 14 HR 0 0 10 Kappa value is 0.787 ***************************************************************** Comparison between HIVDB and VGI for TDF SN IR HR SN 1162 116 0 IR 84 364 309 HR 0 0 10 Kappa value is 0.606 ***************************************************************** Comparison between Rega and ANRS for TDF SN IR HR SN 1348 0 0 IR 171 0 502 HR 0 10 14 Kappa value is 0.509 ***************************************************************** Comparison between Rega and HIVDB for TDF SN IR HR SN 1216 132 0 IR 62 611 0 HR 0 14 10 Kappa value is 0.787 ***************************************************************** Comparison between Rega and Rega for TDF SN IR HR SN 1348 0 0 IR 0 673 0 HR 0 0 24 Kappa value is 1.000 ***************************************************************** Comparison between Rega and VGI for TDF SN IR HR SN 1188 160 0 IR 55 315 303 HR 3 5 16 Kappa value is 0.589 ***************************************************************** Comparison between VGI and ANRS for TDF SN IR HR SN 1243 0 3 IR 276 5 199 HR 0 5 314 Kappa value is 0.694 ***************************************************************** Comparison between VGI and HIVDB for TDF SN IR HR SN 1162 84 0 IR 116 364 0 HR 0 309 10 Kappa value is 0.606 ***************************************************************** Comparison between VGI and Rega for TDF SN IR HR SN 1188 55 3 IR 160 315 5 HR 0 303 16 Kappa value is 0.589 ***************************************************************** Comparison between VGI and VGI for TDF SN IR HR SN 1246 0 0 IR 0 480 0 HR 0 0 319 Kappa value is 1.000 ***************************************************************** Summary of Results (matrix of kappa values) for TDF: ANRS HIVDB Rega VGI ANRS 1.000 0.455 0.509 0.694 HIVDB 0.455 1.000 0.787 0.606 Rega 0.509 0.787 1.000 0.589 VGI 0.694 0.606 0.589 1.000 The average kappa is 0.607 ***************************************************************** *****************************************************************